RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, human

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-223	ENST00000590215	PRSS2	P07478	247 aa		11.91	□□□□□ -0.5
MBD1-223	ENST00000590215	KRTAP4-5	Q9BYR2	181 aa		11.91	□□□□□ -0.5
MBD1-223	ENST00000590215	LINC00474	Q9P2X8	69 aa		11.91	□□□□□ -0.5
MBD1-223	ENST00000590215	C6orf48	Q9UBA6	75 aa		11.91	□□□□□ -0.5
MBD1-223	ENST00000590215	TRBV30	A0A0K0K1B3	111 aa		11.9	□□□□□ -0.5
MBD1-223	ENST00000590215	C11orf86	A6NJI1	115 aa		11.9	□□□□□ -0.5
MBD1-223	ENST00000590215	TLX1NB	P0CAT3	122 aa		11.9	□□□□□ -0.5
MBD1-223	ENST00000590215	C6orf226	Q5I0X4	101 aa		11.9	□□□□□ -0.5
MBD1-223	ENST00000590215	COA6	Q5JTJ3	125 aa	Known RBP	11.9	□□□□□ -0.5
MBD1-223	ENST00000590215	C2orf82	Q6UX34	121 aa		11.9	□□□□□ -0.5
MBD1-223	ENST00000590215	TOMM7	Q9P0U1	55 aa		11.9	□□□□□ -0.5
MBD1-223	ENST00000590215	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.9	□□□□□ -0.5
MBD1-223	ENST00000590215	IGKV2-24	A0A0C4DH68	120 aa		11.89	□□□□□ -0.51
MBD1-223	ENST00000590215	IGLV5-39	A0A0G2JS06	123 aa		11.89	□□□□□ -0.51
MBD1-223	ENST00000590215	SPINK8	P0C7L1	97 aa		11.89	□□□□□ -0.51
MBD1-223	ENST00000590215	PTTG1IP	P53801	180 aa		11.89	□□□□□ -0.51
MBD1-223	ENST00000590215	PLAC8	Q9NZF1	115 aa		11.89	□□□□□ -0.51
MBD1-223	ENST00000590215	HSPB8	Q9UJY1	196 aa		11.89	□□□□□ -0.51
MBD1-223	ENST00000590215		A0A087WYN8	130 aa		11.88	□□□□□ -0.51
MBD1-223	ENST00000590215		F8VRH5	84 aa		11.88	□□□□□ -0.51
MBD1-223	ENST00000590215	CXCL5	P42830	114 aa		11.88	□□□□□ -0.51
MBD1-223	ENST00000590215	EPM2A	B3EWF7	344 aa		11.87	□□□□□ -0.51
MBD1-223	ENST00000590215	CKS1B	P61024	79 aa		11.87	□□□□□ -0.51
MBD1-223	ENST00000590215	MAJIN	Q3KP22	176 aa		11.87	□□□□□ -0.51
MBD1-223	ENST00000590215	COX7B2	Q8TF08	81 aa		11.87	□□□□□ -0.51
MBD1-223	ENST00000590215	VPS13B	Q7Z7G8	4022 aa		11.86	□□□□□ -0.51
MBD1-223	ENST00000590215	FABP4	P15090	132 aa		11.86	□□□□□ -0.51
MBD1-223	ENST00000590215	ODF1	Q14990	250 aa		11.86	□□□□□ -0.51
MBD1-223	ENST00000590215		Q5VSD8	79 aa		11.86	□□□□□ -0.51
MBD1-223	ENST00000590215	DPH3	Q96FX2	82 aa		11.86	□□□□□ -0.51
MBD1-223	ENST00000590215	ABCA13	Q86UQ4	5058 aa		11.86	□□□□□ -0.51
MBD1-223	ENST00000590215	FAM229A	H3BQW9	127 aa		11.85	□□□□□ -0.51
MBD1-223	ENST00000590215	GAGE2B	Q13066	116 aa		11.85	□□□□□ -0.51
MBD1-223	ENST00000590215	LINC00528	Q8N1L1	170 aa		11.85	□□□□□ -0.51
MBD1-223	ENST00000590215	TMEM170B	Q5T4T1	132 aa		11.84	□□□□□ -0.51
MBD1-223	ENST00000590215	RPL18A	Q02543	176 aa	Known RBP	11.83	□□□□□ -0.52
MBD1-223	ENST00000590215		Q6ZRP5	223 aa		11.83	□□□□□ -0.52
MBD1-223	ENST00000590215	STPG4	Q8N801	248 aa		11.83	□□□□□ -0.52
MBD1-223	ENST00000590215	NDUFC2-KCTD14	E9PQ53	114 aa		11.82	□□□□□ -0.52
MBD1-223	ENST00000590215	C9orf116	Q5BN46	136 aa	Predicted RBP	11.82	□□□□□ -0.52
MBD1-223	ENST00000590215	SRRM2	Q9UQ35	2752 aa	Known RBP	11.81	□□□□□ -0.52
MBD1-223	ENST00000590215	TMEM223	A0PJW6	202 aa		11.81	□□□□□ -0.52
MBD1-223	ENST00000590215	PCLO	Q9Y6V0	5065 aa		11.81	□□□□□ -0.52
MBD1-223	ENST00000590215		H0Y8G0	127 aa		11.8	□□□□□ -0.52
MBD1-223	ENST00000590215	MAP1LC3C	Q9BXW4	147 aa		11.8	□□□□□ -0.52
MBD1-223	ENST00000590215		A0A1W2PNN7	141 aa		11.79	□□□□□ -0.52
MBD1-223	ENST00000590215	PLA2G1B	P04054	148 aa	Known RBP	11.78	□□□□□ -0.52
MBD1-223	ENST00000590215	PLN	P26678	52 aa		11.78	□□□□□ -0.52
MBD1-223	ENST00000590215	KRTAP10-4	P60372	401 aa	Predicted RBP	11.78	□□□□□ -0.52
MBD1-223	ENST00000590215	GAGE2E	Q4V326	116 aa		11.77	□□□□□ -0.53
MBD1-223	ENST00000590215	GAGE2D	Q9UEU5	116 aa		11.77	□□□□□ -0.53
MBD1-223	ENST00000590215	SYS1-DBNDD2	H3BUS1	97 aa		11.76	□□□□□ -0.53
MBD1-223	ENST00000590215	DPM2	O94777	84 aa		11.76	□□□□□ -0.53
MBD1-223	ENST00000590215	SFTA2	Q6UW10	78 aa		11.75	□□□□□ -0.53
MBD1-223	ENST00000590215	ZNF625	Q96I27	306 aa	Predicted RBP	11.75	□□□□□ -0.53
MBD1-223	ENST00000590215	IGKC	P01834	107 aa		11.74	□□□□□ -0.53
MBD1-223	ENST00000590215	C9orf129	Q5T035	196 aa	Known RBP	11.74	□□□□□ -0.53
MBD1-223	ENST00000590215	RPL37A	P61513	92 aa	Known RBP	11.73	□□□□□ -0.53
MBD1-223	ENST00000590215	PET117	Q6UWS5	81 aa		11.73	□□□□□ -0.53
MBD1-223	ENST00000590215	C7orf33	Q8WU49	177 aa		11.73	□□□□□ -0.53
MBD1-223	ENST00000590215	PMCHL2	Q9BQD1	86 aa		11.73	□□□□□ -0.53
MBD1-223	ENST00000590215	LINC01545	Q5VT33	79 aa		11.72	□□□□□ -0.53
MBD1-223	ENST00000590215	C3orf79	P0CE67	100 aa		11.71	□□□□□ -0.53
MBD1-223	ENST00000590215	KRTAP7-1	Q8IUC3	87 aa		11.71	□□□□□ -0.53
MBD1-223	ENST00000590215	FAM168B	A1KXE4	195 aa		11.7	□□□□□ -0.54
MBD1-223	ENST00000590215	COX17	Q14061	63 aa		11.7	□□□□□ -0.54
MBD1-223	ENST00000590215	INAFM2	P0DMQ5	153 aa		11.69	□□□□□ -0.54
MBD1-223	ENST00000590215	ERG28	Q9UKR5	140 aa		11.69	□□□□□ -0.54
MBD1-223	ENST00000590215	LEPROT	O15243	131 aa		11.68	□□□□□ -0.54
MBD1-223	ENST00000590215	XAGE1A	Q9HD64	81 aa		11.68	□□□□□ -0.54
MBD1-223	ENST00000590215	FLG2	Q5D862	2391 aa	Predicted RBP	11.67	□□□□□ -0.54
MBD1-223	ENST00000590215	HERVK_113	P61574	105 aa		11.67	□□□□□ -0.54
MBD1-223	ENST00000590215	HIST3H2BB	Q8N257	126 aa		11.67	□□□□□ -0.54
MBD1-223	ENST00000590215	PLEKHB2	Q96CS7	222 aa		11.67	□□□□□ -0.54
MBD1-223	ENST00000590215	TSPEAR-AS2	P59090	65 aa		11.66	□□□□□ -0.54
MBD1-223	ENST00000590215	PHF5A	Q7RTV0	110 aa	Known RBP	11.66	□□□□□ -0.54
MBD1-223	ENST00000590215	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.66	□□□□□ -0.54
MBD1-223	ENST00000590215	PFN2	P35080	140 aa		11.65	□□□□□ -0.54
MBD1-223	ENST00000590215	KRTDAP	P60985	99 aa		11.65	□□□□□ -0.54
MBD1-223	ENST00000590215	HERV-K104	P63124	156 aa		11.65	□□□□□ -0.54
MBD1-223	ENST00000590215	NDUFA12	Q9UI09	145 aa		11.65	□□□□□ -0.54
MBD1-223	ENST00000590215	PLA2G2D	Q9UNK4	145 aa		11.65	□□□□□ -0.54
MBD1-223	ENST00000590215		J3QQQ9	107 aa		11.64	□□□□□ -0.55
MBD1-223	ENST00000590215	SERTAD4-AS1	Q5TG53	156 aa		11.64	□□□□□ -0.55
MBD1-223	ENST00000590215	MYMX	A0A1B0GTQ4	84 aa		11.63	□□□□□ -0.55
MBD1-223	ENST00000590215		E9PLD3	99 aa		11.63	□□□□□ -0.55
MBD1-223	ENST00000590215	S100A6	P06703	90 aa		11.63	□□□□□ -0.55
MBD1-223	ENST00000590215	PRR3	P79522	188 aa	Known RBP	11.63	□□□□□ -0.55
MBD1-223	ENST00000590215	HIST1H2BL	Q99880	126 aa		11.63	□□□□□ -0.55
MBD1-223	ENST00000590215		M0QXV9	152 aa		11.62	□□□□□ -0.55
MBD1-223	ENST00000590215	PKHD1L1	Q86WI1	4243 aa		11.61	□□□□□ -0.55
MBD1-223	ENST00000590215	NMU	P48645	174 aa		11.61	□□□□□ -0.55
MBD1-223	ENST00000590215	SND1-IT1	Q9HBX3	110 aa		11.61	□□□□□ -0.55
MBD1-223	ENST00000590215	TP73-AS1	Q9UF72	201 aa		11.61	□□□□□ -0.55
MBD1-223	ENST00000590215	C22orf24	Q9Y442	160 aa		11.61	□□□□□ -0.55
MBD1-223	ENST00000590215	MYCBP2	O75592	4640 aa		11.6	□□□□□ -0.55
MBD1-223	ENST00000590215	IGLV5-37	A0A075B6J1	123 aa		11.6	□□□□□ -0.55
MBD1-223	ENST00000590215	LINC00587	B1AMM8	73 aa		11.6	□□□□□ -0.55
MBD1-223	ENST00000590215	S100A2	P29034	98 aa		11.6	□□□□□ -0.55
MBD1-223	ENST00000590215	HNRNPA3	P51991	378 aa	Known RBP	11.6	□□□□□ -0.55

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