RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 ODF1Q14990 250 aa8.82□□□□□ -1
ERCC1-208ENST00000589165 LINC00526Q96FQ7 95 aa8.82□□□□□ -1
ERCC1-208ENST00000589165 CARD19Q96LW7 228 aa8.82□□□□□ -1
ERCC1-208ENST00000589165 SCGB3A1Q96QR1 104 aa8.82□□□□□ -1
ERCC1-208ENST00000589165 IGLV4-3A0A075B6K6 122 aa8.81□□□□□ -1
ERCC1-208ENST00000589165 NPSP0C0P6 89 aa8.81□□□□□ -1
ERCC1-208ENST00000589165 MAJINQ3KP22 176 aa8.81□□□□□ -1
ERCC1-208ENST00000589165 C5orf38Q86SI9 138 aa8.81□□□□□ -1
ERCC1-208ENST00000589165 DPH3Q96FX2 82 aa8.81□□□□□ -1
ERCC1-208ENST00000589165 PMCHL2Q9BQD1 86 aa8.81□□□□□ -1
ERCC1-208ENST00000589165 MIEN1Q9BRT3 115 aa8.81□□□□□ -1
ERCC1-208ENST00000589165 IGLV4-69A0A075B6H9 119 aa8.8□□□□□ -1
ERCC1-208ENST00000589165 A0A087WYN8 130 aa8.8□□□□□ -1
ERCC1-208ENST00000589165 IGIPA6NJ69 53 aa8.8□□□□□ -1
ERCC1-208ENST00000589165 HSBP1L1C9JCN9 74 aa8.8□□□□□ -1
ERCC1-208ENST00000589165 APOMO95445 188 aa8.8□□□□□ -1
ERCC1-208ENST00000589165 Q6ZN92 141 aa8.8□□□□□ -1
ERCC1-208ENST00000589165 TMEM141Q96I45 108 aa8.8□□□□□ -1
ERCC1-208ENST00000589165 TIMM17AQ99595 171 aa8.8□□□□□ -1
ERCC1-208ENST00000589165 PLAC8Q9NZF1 115 aa8.8□□□□□ -1
ERCC1-208ENST00000589165 IGLC3P0DOY3 106 aa8.79□□□□□ -1
ERCC1-208ENST00000589165 C2orf48Q96LS8 159 aa8.79□□□□□ -1
ERCC1-208ENST00000589165 LINC00474Q9P2X8 69 aa8.79□□□□□ -1
ERCC1-208ENST00000589165 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
ERCC1-208ENST00000589165 UQCR10Q9UDW1 63 aa8.78□□□□□ -1
ERCC1-208ENST00000589165 A0A096LNI7 61 aa8.77□□□□□ -1
ERCC1-208ENST00000589165 IGKV2-24A0A0C4DH68 120 aa8.77□□□□□ -1
ERCC1-208ENST00000589165 LINC00242Q5T6M2 205 aa8.77□□□□□ -1
ERCC1-208ENST00000589165 Q6ZRU5 148 aa8.77□□□□□ -1
ERCC1-208ENST00000589165 CAMK2N2Q96S95 79 aa8.77□□□□□ -1
ERCC1-208ENST00000589165 A0A087WZ39 114 aa8.77□□□□□ -1.01
ERCC1-208ENST00000589165 F8WDY8 70 aa8.77□□□□□ -1.01
ERCC1-208ENST00000589165 DPM2O94777 84 aa8.77□□□□□ -1.01
ERCC1-208ENST00000589165 IGKCP01834 107 aa8.77□□□□□ -1.01
ERCC1-208ENST00000589165 UBE2D1P51668 147 aa8.77□□□□□ -1.01
ERCC1-208ENST00000589165 SPAG11BQ08648 103 aa8.77□□□□□ -1.01
ERCC1-208ENST00000589165 AMELXQ99217 191 aa8.77□□□□□ -1.01
ERCC1-208ENST00000589165 PKHD1L1Q86WI1 4243 aa8.76□□□□□ -1.01
ERCC1-208ENST00000589165 F8VRH5 84 aa8.76□□□□□ -1.01
ERCC1-208ENST00000589165 PLNP26678 52 aa8.76□□□□□ -1.01
ERCC1-208ENST00000589165 RNF151Q2KHN1 245 aa8.76□□□□□ -1.01
ERCC1-208ENST00000589165 C2orf88Q9BSF0 95 aa8.76□□□□□ -1.01
ERCC1-208ENST00000589165 VCX2Q9H322 139 aa8.76□□□□□ -1.01
ERCC1-208ENST00000589165 MRPL35Q9NZE8 188 aaKnown RBP8.76□□□□□ -1.01
ERCC1-208ENST00000589165 LOC107984640A0A0U1RRK4 108 aa8.75□□□□□ -1.01
ERCC1-208ENST00000589165 PAPPA-AS1Q5QFB9 102 aa8.75□□□□□ -1.01
ERCC1-208ENST00000589165 ZC2HC1BQ5TFG8 222 aa8.75□□□□□ -1.01
ERCC1-208ENST00000589165 STPG4Q8N801 248 aa8.75□□□□□ -1.01
ERCC1-208ENST00000589165 ORAOV1Q8WV07 137 aa8.75□□□□□ -1.01
ERCC1-208ENST00000589165 CHTOPQ9Y3Y2 248 aaKnown RBP8.75□□□□□ -1.01
ERCC1-208ENST00000589165 PMVKQ15126 192 aa8.74□□□□□ -1.01
ERCC1-208ENST00000589165 FAM19A3Q7Z5A8 133 aa8.74□□□□□ -1.01
ERCC1-208ENST00000589165 LINC01561Q8N1V8 128 aa8.74□□□□□ -1.01
ERCC1-208ENST00000589165 C14orf144Q96I85 54 aa8.74□□□□□ -1.01
ERCC1-208ENST00000589165 KRTAP29-1A8MX34 341 aaPredicted RBP8.73□□□□□ -1.01
ERCC1-208ENST00000589165 PTTG1IPP53801 180 aa8.73□□□□□ -1.01
ERCC1-208ENST00000589165 ANKRD39Q53RE8 183 aa8.73□□□□□ -1.01
ERCC1-208ENST00000589165 CST9LQ9H4G1 147 aa8.73□□□□□ -1.01
ERCC1-208ENST00000589165 COX8AP10176 69 aa8.72□□□□□ -1.01
ERCC1-208ENST00000589165 C7orf33Q8WU49 177 aa8.72□□□□□ -1.01
ERCC1-208ENST00000589165 LRP1Q07954 4544 aaKnown RBP8.72□□□□□ -1.01
ERCC1-208ENST00000589165 NDUFA1O15239 70 aa8.71□□□□□ -1.01
ERCC1-208ENST00000589165 KIAA0087Q14695 138 aa8.71□□□□□ -1.01
ERCC1-208ENST00000589165 SLC25A34Q6PIV7 304 aa8.71□□□□□ -1.01
ERCC1-208ENST00000589165 SEC11AP67812 179 aa8.7□□□□□ -1.02
ERCC1-208ENST00000589165 FAT3Q8TDW7 4589 aa8.7□□□□□ -1.02
ERCC1-208ENST00000589165 DLEU1O43261 78 aa8.7□□□□□ -1.02
ERCC1-208ENST00000589165 HNRNPA3P51991 378 aaKnown RBP8.7□□□□□ -1.02
ERCC1-208ENST00000589165 GAGE2BQ13066 116 aa8.7□□□□□ -1.02
ERCC1-208ENST00000589165 J3QL48 77 aa8.69□□□□□ -1.02
ERCC1-208ENST00000589165 OXTP01178 125 aa8.69□□□□□ -1.02
ERCC1-208ENST00000589165 HERVK_113P63121 156 aa8.69□□□□□ -1.02
ERCC1-208ENST00000589165 C10orf25Q5T742 122 aa8.69□□□□□ -1.02
ERCC1-208ENST00000589165 UNQ6190/PRO20217Q6UXQ8 127 aa8.69□□□□□ -1.02
ERCC1-208ENST00000589165 BOD1L2Q8IYS8 172 aa8.69□□□□□ -1.02
ERCC1-208ENST00000589165 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
ERCC1-208ENST00000589165 TLX1NBP0CAT3 122 aa8.68□□□□□ -1.02
ERCC1-208ENST00000589165 C11orf86A6NJI1 115 aa8.67□□□□□ -1.02
ERCC1-208ENST00000589165 CTAG1AP78358 180 aa8.67□□□□□ -1.02
ERCC1-208ENST00000589165 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
ERCC1-208ENST00000589165 LBHQ53QV2 105 aaPredicted RBP8.67□□□□□ -1.02
ERCC1-208ENST00000589165 C6orf48Q9UBA6 75 aa8.67□□□□□ -1.02
ERCC1-208ENST00000589165 IGKV2D-26A0A0A0MRZ7 120 aa8.66□□□□□ -1.02
ERCC1-208ENST00000589165 TRBV30A0A0K0K1B3 111 aa8.66□□□□□ -1.02
ERCC1-208ENST00000589165 M0R143 59 aa8.66□□□□□ -1.02
ERCC1-208ENST00000589165 GEMIN7Q9H840 131 aaKnown RBP8.66□□□□□ -1.02
ERCC1-208ENST00000589165 CDKN2A-AS1Q9UH64 79 aa8.66□□□□□ -1.02
ERCC1-208ENST00000589165 A0A1W2PNN7 141 aa8.65□□□□□ -1.02
ERCC1-208ENST00000589165 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
ERCC1-208ENST00000589165 SNHG12Q9BXW3 62 aa8.65□□□□□ -1.02
ERCC1-208ENST00000589165 TINCRA0A1B0GVN0 87 aa8.64□□□□□ -1.03
ERCC1-208ENST00000589165 E9PLD3 99 aa8.64□□□□□ -1.03
ERCC1-208ENST00000589165 NMUP48645 174 aa8.64□□□□□ -1.03
ERCC1-208ENST00000589165 C9orf116Q5BN46 136 aaPredicted RBP8.64□□□□□ -1.03
ERCC1-208ENST00000589165 C2orf82Q6UX34 121 aa8.64□□□□□ -1.03
ERCC1-208ENST00000589165 Q6ZRP5 223 aa8.64□□□□□ -1.03
ERCC1-208ENST00000589165 C2orf91Q6ZV80 131 aa8.64□□□□□ -1.03
ERCC1-208ENST00000589165 PCP2Q8IVA1 136 aa8.64□□□□□ -1.03
ERCC1-208ENST00000589165 Q8IZM0 81 aa8.64□□□□□ -1.03
ERCC1-208ENST00000589165 IGLV5-45A0A087WSX0 123 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms