RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 ZC2HC1BQ5TFG8 222 aa12.4□□□□□ -0.42
CAPNS1-205ENST00000588780 KRTAP4-1Q9BYQ7 146 aa12.4□□□□□ -0.42
CAPNS1-205ENST00000588780 C4orf48Q5BLP8 95 aa12.39□□□□□ -0.43
CAPNS1-205ENST00000588780 SLC51BQ86UW2 128 aa12.39□□□□□ -0.43
CAPNS1-205ENST00000588780 PRLHP81277 87 aa12.38□□□□□ -0.43
CAPNS1-205ENST00000588780 SPAG11AQ6PDA7 123 aa12.38□□□□□ -0.43
CAPNS1-205ENST00000588780 C3orf22Q8N5N4 141 aa12.38□□□□□ -0.43
CAPNS1-205ENST00000588780 IGKV2-28A0A075B6P5 120 aa12.37□□□□□ -0.43
CAPNS1-205ENST00000588780 IGKV2D-28P01615 120 aa12.37□□□□□ -0.43
CAPNS1-205ENST00000588780 VCX2Q9H322 139 aa12.37□□□□□ -0.43
CAPNS1-205ENST00000588780 A0A1B0GW15 77 aa12.36□□□□□ -0.43
CAPNS1-205ENST00000588780 F8W036 122 aa12.36□□□□□ -0.43
CAPNS1-205ENST00000588780 KRTAP13-3Q3SY46 172 aa12.36□□□□□ -0.43
CAPNS1-205ENST00000588780 FAM74A3Q4VXF1 159 aa12.36□□□□□ -0.43
CAPNS1-205ENST00000588780 FAM19A1Q7Z5A9 133 aa12.36□□□□□ -0.43
CAPNS1-205ENST00000588780 BATF3Q9NR55 127 aa12.36□□□□□ -0.43
CAPNS1-205ENST00000588780 BLOC1S1P78537 153 aa12.34□□□□□ -0.43
CAPNS1-205ENST00000588780 PPBPP02775 128 aa12.33□□□□□ -0.44
CAPNS1-205ENST00000588780 S100A8P05109 93 aa12.33□□□□□ -0.44
CAPNS1-205ENST00000588780 CXCL5P42830 114 aa12.33□□□□□ -0.44
CAPNS1-205ENST00000588780 MRPL54Q6P161 138 aaKnown RBP12.33□□□□□ -0.44
CAPNS1-205ENST00000588780 RAB5BP61020 215 aa12.32□□□□□ -0.44
CAPNS1-205ENST00000588780 GEMIN7Q9H840 131 aaKnown RBP12.32□□□□□ -0.44
CAPNS1-205ENST00000588780 SCO1O75880 301 aa12.31□□□□□ -0.44
CAPNS1-205ENST00000588780 CDKN2A-AS1Q9UH64 79 aa12.31□□□□□ -0.44
CAPNS1-205ENST00000588780 CYSLTR1Q9Y271 337 aa12.31□□□□□ -0.44
CAPNS1-205ENST00000588780 LOC389332A0A1B0GUA5 103 aa12.3□□□□□ -0.44
CAPNS1-205ENST00000588780 HERVK_113P63121 156 aa12.3□□□□□ -0.44
CAPNS1-205ENST00000588780 ORMDL3Q8N138 153 aa12.3□□□□□ -0.44
CAPNS1-205ENST00000588780 PRELID3AQ96N28 172 aa12.3□□□□□ -0.44
CAPNS1-205ENST00000588780 IGLV5-37A0A075B6J1 123 aa12.29□□□□□ -0.44
CAPNS1-205ENST00000588780 SMIM27A0A1W2PRY6 76 aa12.29□□□□□ -0.44
CAPNS1-205ENST00000588780 ADIRFQ15847 76 aa12.29□□□□□ -0.44
CAPNS1-205ENST00000588780 TMEM136Q6ZRR5 245 aa12.29□□□□□ -0.44
CAPNS1-205ENST00000588780 AMELXQ99217 191 aa12.29□□□□□ -0.44
CAPNS1-205ENST00000588780 SEC11AP67812 179 aa12.28□□□□□ -0.44
CAPNS1-205ENST00000588780 C2orf66Q6UXQ4 117 aa12.28□□□□□ -0.44
CAPNS1-205ENST00000588780 ALKAL2Q6UX46 152 aa12.27□□□□□ -0.45
CAPNS1-205ENST00000588780 CBLN2Q8IUK8 224 aa12.27□□□□□ -0.45
CAPNS1-205ENST00000588780 PLEKHB2Q96CS7 222 aa12.27□□□□□ -0.45
CAPNS1-205ENST00000588780 A0A1B0GVG6 124 aa12.26□□□□□ -0.45
CAPNS1-205ENST00000588780 TMEM238C9JI98 176 aa12.26□□□□□ -0.45
CAPNS1-205ENST00000588780 TMEM126AQ9H061 195 aa12.26□□□□□ -0.45
CAPNS1-205ENST00000588780 SRP19P09132 144 aaKnown RBP12.25□□□□□ -0.45
CAPNS1-205ENST00000588780 RPL23P62829 140 aaKnown RBP12.25□□□□□ -0.45
CAPNS1-205ENST00000588780 HIGD2AQ9BW72 106 aa12.25□□□□□ -0.45
CAPNS1-205ENST00000588780 COX7B2Q8TF08 81 aa12.24□□□□□ -0.45
CAPNS1-205ENST00000588780 MAP1LC3AQ9H492 121 aa12.24□□□□□ -0.45
CAPNS1-205ENST00000588780 FAM19A3Q7Z5A8 133 aa12.23□□□□□ -0.45
CAPNS1-205ENST00000588780 DAND5Q8N907 189 aa12.23□□□□□ -0.45
CAPNS1-205ENST00000588780 NDUFA12Q9UI09 145 aa12.23□□□□□ -0.45
CAPNS1-205ENST00000588780 CFC1BP0CG36 223 aa12.22□□□□□ -0.45
CAPNS1-205ENST00000588780 Q8NBF4 154 aa12.22□□□□□ -0.45
CAPNS1-205ENST00000588780 GNB1LQ9BYB4 327 aa12.22□□□□□ -0.45
CAPNS1-205ENST00000588780 PAPPA-AS1Q5QFB9 102 aa12.21□□□□□ -0.45
CAPNS1-205ENST00000588780 A0A1B0GXF2 115 aa12.19□□□□□ -0.46
CAPNS1-205ENST00000588780 NPSP0C0P6 89 aa12.19□□□□□ -0.46
CAPNS1-205ENST00000588780 ORMDL2Q53FV1 153 aa12.19□□□□□ -0.46
CAPNS1-205ENST00000588780 LCE2CQ5TA81 110 aa12.19□□□□□ -0.46
CAPNS1-205ENST00000588780 IGIPA6NJ69 53 aa12.18□□□□□ -0.46
CAPNS1-205ENST00000588780 SMIM1B2RUZ4 78 aa12.18□□□□□ -0.46
CAPNS1-205ENST00000588780 PDZD11Q5EBL8 140 aa12.18□□□□□ -0.46
CAPNS1-205ENST00000588780 Q8N8P6 123 aa12.18□□□□□ -0.46
CAPNS1-205ENST00000588780 M0R378 163 aa12.17□□□□□ -0.46
CAPNS1-205ENST00000588780 SPRR4Q96PI1 79 aa12.17□□□□□ -0.46
CAPNS1-205ENST00000588780 NAT8Q9UHE5 227 aa12.17□□□□□ -0.46
CAPNS1-205ENST00000588780 SPINK1P00995 79 aa12.16□□□□□ -0.46
CAPNS1-205ENST00000588780 PFN2P35080 140 aa12.16□□□□□ -0.46
CAPNS1-205ENST00000588780 ATP5LO75964 103 aa12.15□□□□□ -0.46
CAPNS1-205ENST00000588780 MT1HP80294 61 aa12.15□□□□□ -0.46
CAPNS1-205ENST00000588780 LAMTOR2Q9Y2Q5 125 aa12.15□□□□□ -0.46
CAPNS1-205ENST00000588780 ZNF706Q9Y5V0 76 aaPredicted RBP12.15□□□□□ -0.46
CAPNS1-205ENST00000588780 PRSS47A8MTI9 375 aa12.14□□□□□ -0.47
CAPNS1-205ENST00000588780 RPL24P83731 157 aaKnown RBP12.14□□□□□ -0.47
CAPNS1-205ENST00000588780 TCTE3Q8IZS6 198 aa12.14□□□□□ -0.47
CAPNS1-205ENST00000588780 SPINK8P0C7L1 97 aa12.12□□□□□ -0.47
CAPNS1-205ENST00000588780 VPREB1P12018 145 aa12.12□□□□□ -0.47
CAPNS1-205ENST00000588780 RAB14P61106 215 aa12.12□□□□□ -0.47
CAPNS1-205ENST00000588780 FAM19A2Q8N3H0 131 aa12.11□□□□□ -0.47
CAPNS1-205ENST00000588780 ATP5L2Q7Z4Y8 100 aa12.1□□□□□ -0.47
CAPNS1-205ENST00000588780 G0S2P27469 103 aa12.09□□□□□ -0.47
CAPNS1-205ENST00000588780 XP32Q5T750 250 aa12.09□□□□□ -0.47
CAPNS1-205ENST00000588780 TIMM17AQ99595 171 aa12.09□□□□□ -0.47
CAPNS1-205ENST00000588780 TINCRA0A1B0GVN0 87 aa12.08□□□□□ -0.48
CAPNS1-205ENST00000588780 K7EMI3 77 aa12.08□□□□□ -0.48
CAPNS1-205ENST00000588780 SND1-IT1Q9HBX3 110 aa12.08□□□□□ -0.48
CAPNS1-205ENST00000588780 SCGB3A1Q96QR1 104 aa12.06□□□□□ -0.48
CAPNS1-205ENST00000588780 NXT2Q9NPJ8 142 aaKnown RBP12.06□□□□□ -0.48
CAPNS1-205ENST00000588780 M0R2T5 61 aa12.05□□□□□ -0.48
CAPNS1-205ENST00000588780 AKAP14Q86UN6 197 aa12.05□□□□□ -0.48
CAPNS1-205ENST00000588780 KRTAP10-6P60371 365 aaPredicted RBP12.04□□□□□ -0.48
CAPNS1-205ENST00000588780 KRTAP19-2Q3LHN2 52 aa12.04□□□□□ -0.48
CAPNS1-205ENST00000588780 TOMM6Q96B49 74 aa12.04□□□□□ -0.48
CAPNS1-205ENST00000588780 SLC25A20O43772 301 aa12.03□□□□□ -0.48
CAPNS1-205ENST00000588780 LORP23490 312 aaPredicted RBP12.03□□□□□ -0.48
CAPNS1-205ENST00000588780 IGLV5-45A0A087WSX0 123 aa12.02□□□□□ -0.49
CAPNS1-205ENST00000588780 KRTAP9-7A8MTY7 169 aa12.02□□□□□ -0.49
CAPNS1-205ENST00000588780 C9JQL5 133 aa12.02□□□□□ -0.49
CAPNS1-205ENST00000588780 H3BRM9 83 aa12.02□□□□□ -0.49
CAPNS1-205ENST00000588780 ERASQ7Z444 233 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms