RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 NDUFA5Q16718 116 aa12.1□□□□□ -0.47
TPM4-208ENST00000588410 REG3GQ6UW15 175 aa12.1□□□□□ -0.47
TPM4-208ENST00000588410 FAM19A5Q7Z5A7 132 aaPredicted RBP12.1□□□□□ -0.47
TPM4-208ENST00000588410 Q8IZM0 81 aa12.1□□□□□ -0.47
TPM4-208ENST00000588410 FAM168BA1KXE4 195 aa12.09□□□□□ -0.47
TPM4-208ENST00000588410 APOC3P02656 99 aa12.09□□□□□ -0.47
TPM4-208ENST00000588410 LINC00469Q8N7U9 141 aa12.09□□□□□ -0.47
TPM4-208ENST00000588410 PSORS1C2Q9UIG4 136 aa12.09□□□□□ -0.47
TPM4-208ENST00000588410 TRAPPC1Q9Y5R8 145 aa12.08□□□□□ -0.48
TPM4-208ENST00000588410 TINCRA0A1B0GVN0 87 aa12.07□□□□□ -0.48
TPM4-208ENST00000588410 SNAPINO95295 136 aa12.07□□□□□ -0.48
TPM4-208ENST00000588410 SRSF9Q13242 221 aaKnown RBP eCLIP12.07□□□□□ -0.48
TPM4-208ENST00000588410 C1orf137Q5JT78 98 aa12.07□□□□□ -0.48
TPM4-208ENST00000588410 LINC01600Q96MT4 127 aa12.07□□□□□ -0.48
TPM4-208ENST00000588410 PLA2G2DQ9UNK4 145 aa12.07□□□□□ -0.48
TPM4-208ENST00000588410 SVBPQ8N300 66 aa12.06□□□□□ -0.48
TPM4-208ENST00000588410 CST9LQ9H4G1 147 aa12.06□□□□□ -0.48
TPM4-208ENST00000588410 PMVKQ15126 192 aa12.05□□□□□ -0.48
TPM4-208ENST00000588410 F8VRH5 84 aa12.04□□□□□ -0.48
TPM4-208ENST00000588410 M0QXV9 152 aa12.04□□□□□ -0.48
TPM4-208ENST00000588410 CXCL5P42830 114 aa12.03□□□□□ -0.48
TPM4-208ENST00000588410 UBE2BP63146 152 aa12.03□□□□□ -0.48
TPM4-208ENST00000588410 PDZD11Q5EBL8 140 aa12.03□□□□□ -0.48
TPM4-208ENST00000588410 HMCN2Q8NDA2 5059 aa12.03□□□□□ -0.48
TPM4-208ENST00000588410 SMIM1B2RUZ4 78 aa12.02□□□□□ -0.49
TPM4-208ENST00000588410 C9orf129Q5T035 196 aaKnown RBP12.02□□□□□ -0.49
TPM4-208ENST00000588410 LINC00614P0C842 121 aa12.01□□□□□ -0.49
TPM4-208ENST00000588410 C18orf32Q8TCD1 76 aa12.01□□□□□ -0.49
TPM4-208ENST00000588410 COX7B2Q8TF08 81 aa12.01□□□□□ -0.49
TPM4-208ENST00000588410 IGLV5-45A0A087WSX0 123 aa12□□□□□ -0.49
TPM4-208ENST00000588410 H3BRM9 83 aa12□□□□□ -0.49
TPM4-208ENST00000588410 NDUFA6P56556 154 aa12□□□□□ -0.49
TPM4-208ENST00000588410 IGLV7-43P04211 117 aa11.99□□□□□ -0.49
TPM4-208ENST00000588410 SPINK8P0C7L1 97 aa11.99□□□□□ -0.49
TPM4-208ENST00000588410 RAB5BP61020 215 aa11.99□□□□□ -0.49
TPM4-208ENST00000588410 KRTAP7-1Q8IUC3 87 aa11.99□□□□□ -0.49
TPM4-208ENST00000588410 HBDP02042 147 aa11.98□□□□□ -0.49
TPM4-208ENST00000588410 XAGE1AQ9HD64 81 aa11.98□□□□□ -0.49
TPM4-208ENST00000588410 KRTAP11-1Q8IUC1 163 aa11.97□□□□□ -0.49
TPM4-208ENST00000588410 DIRC1Q969H9 104 aa11.97□□□□□ -0.49
TPM4-208ENST00000588410 URB1-AS1Q96HZ7 61 aa11.96□□□□□ -0.49
TPM4-208ENST00000588410 A0A096LNJ9 63 aa11.95□□□□□ -0.5
TPM4-208ENST00000588410 PMCHL1Q16048 86 aa11.95□□□□□ -0.5
TPM4-208ENST00000588410 ATP5LO75964 103 aa11.94□□□□□ -0.5
TPM4-208ENST00000588410 IGLC3P0DOY3 106 aa11.94□□□□□ -0.5
TPM4-208ENST00000588410 LBHQ53QV2 105 aaPredicted RBP11.94□□□□□ -0.5
TPM4-208ENST00000588410 KRTAP10-8P60410 259 aa11.93□□□□□ -0.5
TPM4-208ENST00000588410 C22orf24Q9Y442 160 aa11.93□□□□□ -0.5
TPM4-208ENST00000588410 BAGE3Q86Y29 109 aa11.91□□□□□ -0.5
TPM4-208ENST00000588410 H0Y9J4 135 aa11.9□□□□□ -0.5
TPM4-208ENST00000588410 ZNF22P17026 224 aaPredicted RBP11.89□□□□□ -0.51
TPM4-208ENST00000588410 YPEL4Q96NS1 127 aa11.89□□□□□ -0.51
TPM4-208ENST00000588410 TNXBP22105 4242 aa11.89□□□□□ -0.51
TPM4-208ENST00000588410 MRPL55Q7Z7F7 128 aaKnown RBP11.88□□□□□ -0.51
TPM4-208ENST00000588410 TP73-AS1Q9UF72 201 aa11.88□□□□□ -0.51
TPM4-208ENST00000588410 IGLV5-39A0A0G2JS06 123 aa11.87□□□□□ -0.51
TPM4-208ENST00000588410 NUPR1O60356 82 aa11.87□□□□□ -0.51
TPM4-208ENST00000588410 ODF1Q14990 250 aa11.87□□□□□ -0.51
TPM4-208ENST00000588410 CHCHD1Q96BP2 118 aaKnown RBP11.87□□□□□ -0.51
TPM4-208ENST00000588410 TMEM170BQ5T4T1 132 aa11.86□□□□□ -0.51
TPM4-208ENST00000588410 CBLN2Q8IUK8 224 aa11.86□□□□□ -0.51
TPM4-208ENST00000588410 C11orf86A6NJI1 115 aa11.85□□□□□ -0.51
TPM4-208ENST00000588410 PFN2P35080 140 aa11.85□□□□□ -0.51
TPM4-208ENST00000588410 CHTOPQ9Y3Y2 248 aaKnown RBP11.85□□□□□ -0.51
TPM4-208ENST00000588410 NKAPP1Q8N9T2 125 aa11.83□□□□□ -0.52
TPM4-208ENST00000588410 ZNF861PO60384 105 aa11.82□□□□□ -0.52
TPM4-208ENST00000588410 PRR26Q8N8Z3 221 aa11.82□□□□□ -0.52
TPM4-208ENST00000588410 IFI27L1Q96BM0 104 aa11.82□□□□□ -0.52
TPM4-208ENST00000588410 GAGE10A6NGK3 116 aa11.81□□□□□ -0.52
TPM4-208ENST00000588410 RPL37AP8A6NKH3 93 aa11.81□□□□□ -0.52
TPM4-208ENST00000588410 HSBP1O75506 76 aa11.81□□□□□ -0.52
TPM4-208ENST00000588410 SFTA2Q6UW10 78 aa11.81□□□□□ -0.52
TPM4-208ENST00000588410 LINC00167Q96N53 147 aa11.81□□□□□ -0.52
TPM4-208ENST00000588410 ERG28Q9UKR5 140 aa11.81□□□□□ -0.52
TPM4-208ENST00000588410 TRAV12-1A0A0B4J245 112 aa11.8□□□□□ -0.52
TPM4-208ENST00000588410 ZNF625Q96I27 306 aaPredicted RBP11.8□□□□□ -0.52
TPM4-208ENST00000588410 IGLV1-50A0A075B6I6 118 aa11.79□□□□□ -0.52
TPM4-208ENST00000588410 IGLV5-37A0A075B6J1 123 aa11.79□□□□□ -0.52
TPM4-208ENST00000588410 BCE1O60756 84 aa11.79□□□□□ -0.52
TPM4-208ENST00000588410 RPL28P46779 137 aaKnown RBP11.78□□□□□ -0.52
TPM4-208ENST00000588410 COX17Q14061 63 aa11.78□□□□□ -0.52
TPM4-208ENST00000588410 TRGC2P03986 189 aa11.77□□□□□ -0.53
TPM4-208ENST00000588410 SND1-IT1Q9HBX3 110 aa11.77□□□□□ -0.53
TPM4-208ENST00000588410 KRTAP1-4P0C5Y4 121 aa11.76□□□□□ -0.53
TPM4-208ENST00000588410 SLC7A5P1Q8MH63 180 aa11.76□□□□□ -0.53
TPM4-208ENST00000588410 FAM19A2Q8N3H0 131 aa11.76□□□□□ -0.53
TPM4-208ENST00000588410 TMEM223A0PJW6 202 aa11.75□□□□□ -0.53
TPM4-208ENST00000588410 UBR4Q5T4S7 5183 aa11.75□□□□□ -0.53
TPM4-208ENST00000588410 RPL13AP40429 203 aaKnown RBP11.74□□□□□ -0.53
TPM4-208ENST00000588410 RPL24P83731 157 aaKnown RBP11.74□□□□□ -0.53
TPM4-208ENST00000588410 LINC00158P58513 81 aa11.73□□□□□ -0.53
TPM4-208ENST00000588410 IGKV2-28A0A075B6P5 120 aa11.72□□□□□ -0.53
TPM4-208ENST00000588410 H0Y8G0 127 aa11.72□□□□□ -0.53
TPM4-208ENST00000588410 SCO1O75880 301 aa11.72□□□□□ -0.53
TPM4-208ENST00000588410 IGKV2D-28P01615 120 aa11.72□□□□□ -0.53
TPM4-208ENST00000588410 UBE2AP49459 152 aa11.72□□□□□ -0.53
TPM4-208ENST00000588410 LEPROTL1O95214 131 aa11.71□□□□□ -0.53
TPM4-208ENST00000588410 VPREB1P12018 145 aa11.71□□□□□ -0.53
TPM4-208ENST00000588410 ATP6V1G1O75348 118 aa11.7□□□□□ -0.54
TPM4-208ENST00000588410 SERF1AO75920 110 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms