RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 KRTAP10-1P60331 282 aa5.85□□□□□ -1.47
CIRBP-218ENST00000588344 HERVK_113P61574 105 aa5.85□□□□□ -1.47
CIRBP-218ENST00000588344 Q6ZRU5 148 aa5.85□□□□□ -1.47
CIRBP-218ENST00000588344 HIST3H2BBQ8N257 126 aa5.85□□□□□ -1.47
CIRBP-218ENST00000588344 LINC00526Q96FQ7 95 aa5.85□□□□□ -1.47
CIRBP-218ENST00000588344 LOC107984640A0A0U1RRK4 108 aa5.84□□□□□ -1.47
CIRBP-218ENST00000588344 TMEM223A0PJW6 202 aa5.84□□□□□ -1.47
CIRBP-218ENST00000588344 TLX1NBP0CAT3 122 aa5.84□□□□□ -1.47
CIRBP-218ENST00000588344 C3orf79P0CE67 100 aa5.84□□□□□ -1.47
CIRBP-218ENST00000588344 KRTDAPP60985 99 aa5.84□□□□□ -1.47
CIRBP-218ENST00000588344 LINC01545Q5VT33 79 aa5.84□□□□□ -1.47
CIRBP-218ENST00000588344 UNQ6190/PRO20217Q6UXQ8 127 aa5.84□□□□□ -1.47
CIRBP-218ENST00000588344 Q6ZSA8 131 aa5.84□□□□□ -1.47
CIRBP-218ENST00000588344 DNAH5Q8TE73 4624 aa5.83□□□□□ -1.48
CIRBP-218ENST00000588344 C5orf52A6NGY3 159 aa5.83□□□□□ -1.48
CIRBP-218ENST00000588344 SNRPEP62304 92 aaKnown RBP5.83□□□□□ -1.48
CIRBP-218ENST00000588344 DPH3Q96FX2 82 aa5.83□□□□□ -1.48
CIRBP-218ENST00000588344 HIST1H2BLQ99880 126 aa5.83□□□□□ -1.48
CIRBP-218ENST00000588344 DYNC1H1Q14204 4646 aaKnown RBP5.83□□□□□ -1.48
CIRBP-218ENST00000588344 LRP1BQ9NZR2 4599 aa5.82□□□□□ -1.48
CIRBP-218ENST00000588344 LINC00587B1AMM8 73 aa5.82□□□□□ -1.48
CIRBP-218ENST00000588344 NDUFC2-KCTD14E9PQ53 114 aa5.82□□□□□ -1.48
CIRBP-218ENST00000588344 CIRBPQ14011 172 aaKnown RBP5.82□□□□□ -1.48
CIRBP-218ENST00000588344 LINC01620Q4KN68 170 aa5.82□□□□□ -1.48
CIRBP-218ENST00000588344 C10orf25Q5T742 122 aa5.82□□□□□ -1.48
CIRBP-218ENST00000588344 PLEKHB2Q96CS7 222 aa5.82□□□□□ -1.48
CIRBP-218ENST00000588344 BIRC6Q9NR09 4857 aa5.82□□□□□ -1.48
CIRBP-218ENST00000588344 LCE2BO14633 110 aa5.81□□□□□ -1.48
CIRBP-218ENST00000588344 HERV-K104P63124 156 aa5.81□□□□□ -1.48
CIRBP-218ENST00000588344 COX17Q14061 63 aa5.81□□□□□ -1.48
CIRBP-218ENST00000588344 C2orf82Q6UX34 121 aa5.81□□□□□ -1.48
CIRBP-218ENST00000588344 PMCHL2Q9BQD1 86 aa5.81□□□□□ -1.48
CIRBP-218ENST00000588344 C6orf48Q9UBA6 75 aa5.81□□□□□ -1.48
CIRBP-218ENST00000588344 MYMXA0A1B0GTQ4 84 aa5.8□□□□□ -1.48
CIRBP-218ENST00000588344 LEPROTO15243 131 aa5.8□□□□□ -1.48
CIRBP-218ENST00000588344 NMUP48645 174 aa5.8□□□□□ -1.48
CIRBP-218ENST00000588344 PTTG1IPP53801 180 aa5.8□□□□□ -1.48
CIRBP-218ENST00000588344 GAGE2BQ13066 116 aa5.8□□□□□ -1.48
CIRBP-218ENST00000588344 SPACA4Q8TDM5 124 aa5.8□□□□□ -1.48
CIRBP-218ENST00000588344 FAM30AQ9NZY2 134 aa5.8□□□□□ -1.48
CIRBP-218ENST00000588344 E9PLD3 99 aa5.79□□□□□ -1.48
CIRBP-218ENST00000588344 XGP55808 180 aa5.79□□□□□ -1.48
CIRBP-218ENST00000588344 RPL18AQ02543 176 aaKnown RBP5.79□□□□□ -1.48
CIRBP-218ENST00000588344 ZNF625Q96I27 306 aaPredicted RBP5.79□□□□□ -1.48
CIRBP-218ENST00000588344 A0A096LNI7 61 aa5.78□□□□□ -1.48
CIRBP-218ENST00000588344 IGKV2-24A0A0C4DH68 120 aa5.78□□□□□ -1.48
CIRBP-218ENST00000588344 J3QQQ9 107 aa5.78□□□□□ -1.48
CIRBP-218ENST00000588344 LGALS3P17931 250 aaKnown RBP5.78□□□□□ -1.48
CIRBP-218ENST00000588344 MAJINQ3KP22 176 aa5.78□□□□□ -1.48
CIRBP-218ENST00000588344 Q6ZRP5 223 aa5.78□□□□□ -1.48
CIRBP-218ENST00000588344 CIRBP-AS1Q8TBR5 109 aa5.78□□□□□ -1.48
CIRBP-218ENST00000588344 PLAC8Q9NZF1 115 aa5.78□□□□□ -1.48
CIRBP-218ENST00000588344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.78□□□□□ -1.48
CIRBP-218ENST00000588344 C9orf116Q5BN46 136 aaPredicted RBP5.77□□□□□ -1.49
CIRBP-218ENST00000588344 SCXQ7RTU7 201 aa5.77□□□□□ -1.49
CIRBP-218ENST00000588344 STPG4Q8N801 248 aa5.77□□□□□ -1.49
CIRBP-218ENST00000588344 NDUFA12Q9UI09 145 aa5.77□□□□□ -1.49
CIRBP-218ENST00000588344 ERG28Q9UKR5 140 aa5.77□□□□□ -1.49
CIRBP-218ENST00000588344 A0A087WYN8 130 aa5.76□□□□□ -1.49
CIRBP-218ENST00000588344 HSBP1L1C9JCN9 74 aa5.76□□□□□ -1.49
CIRBP-218ENST00000588344 FAM229AH3BQW9 127 aa5.76□□□□□ -1.49
CIRBP-218ENST00000588344 GAGE2EQ4V326 116 aa5.76□□□□□ -1.49
CIRBP-218ENST00000588344 GAGE2DQ9UEU5 116 aa5.76□□□□□ -1.49
CIRBP-218ENST00000588344 DNAH8Q96JB1 4490 aa5.76□□□□□ -1.49
CIRBP-218ENST00000588344 EPM2AB3EWF7 344 aa5.75□□□□□ -1.49
CIRBP-218ENST00000588344 PANO1I0J062 215 aa5.75□□□□□ -1.49
CIRBP-218ENST00000588344 SCGB1D1O95968 90 aa5.75□□□□□ -1.49
CIRBP-218ENST00000588344 CHTF8P0CG12 524 aa5.75□□□□□ -1.49
CIRBP-218ENST00000588344 PFN2P35080 140 aa5.74□□□□□ -1.49
CIRBP-218ENST00000588344 LINC00158P58513 81 aa5.74□□□□□ -1.49
CIRBP-218ENST00000588344 MEIG1Q5JSS6 88 aa5.74□□□□□ -1.49
CIRBP-218ENST00000588344 C7orf33Q8WU49 177 aa5.74□□□□□ -1.49
CIRBP-218ENST00000588344 RYR1P21817 5038 aa5.74□□□□□ -1.49
CIRBP-218ENST00000588344 APOBP04114 4563 aaKnown RBP5.74□□□□□ -1.49
CIRBP-218ENST00000588344 KIAA1109Q2LD37 5005 aa5.73□□□□□ -1.49
CIRBP-218ENST00000588344 RPL24P83731 157 aaKnown RBP5.73□□□□□ -1.49
CIRBP-218ENST00000588344 Q8N1X5 172 aa5.73□□□□□ -1.49
CIRBP-218ENST00000588344 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
CIRBP-218ENST00000588344 TMA7Q9Y2S6 64 aaKnown RBP5.73□□□□□ -1.49
CIRBP-218ENST00000588344 A0A1W2PNN7 141 aa5.72□□□□□ -1.49
CIRBP-218ENST00000588344 PLA2G1BP04054 148 aaKnown RBP5.72□□□□□ -1.49
CIRBP-218ENST00000588344 TSPEAR-AS2P59090 65 aa5.72□□□□□ -1.49
CIRBP-218ENST00000588344 LBHQ53QV2 105 aaPredicted RBP5.72□□□□□ -1.49
CIRBP-218ENST00000588344 C9orf129Q5T035 196 aaKnown RBP5.72□□□□□ -1.49
CIRBP-218ENST00000588344 ATOH7Q8N100 152 aa5.72□□□□□ -1.49
CIRBP-218ENST00000588344 ZNF815PA8K554 130 aa5.71□□□□□ -1.5
CIRBP-218ENST00000588344 TIMM17BO60830 172 aa5.71□□□□□ -1.5
CIRBP-218ENST00000588344 SMR3BP02814 79 aaPredicted RBP5.71□□□□□ -1.5
CIRBP-218ENST00000588344 SMIM13P0DJ93 91 aa5.71□□□□□ -1.5
CIRBP-218ENST00000588344 JOSD1Q15040 202 aaPredicted RBP5.71□□□□□ -1.5
CIRBP-218ENST00000588344 SND1-IT1Q9HBX3 110 aa5.71□□□□□ -1.5
CIRBP-218ENST00000588344 XAGE1AQ9HD64 81 aa5.71□□□□□ -1.5
CIRBP-218ENST00000588344 TP73-AS1Q9UF72 201 aa5.71□□□□□ -1.5
CIRBP-218ENST00000588344 IGKV2D-26A0A0A0MRZ7 120 aa5.7□□□□□ -1.5
CIRBP-218ENST00000588344 LOC107984156A0A0G2JMH3 177 aa5.7□□□□□ -1.5
CIRBP-218ENST00000588344 A0A0J9YXY3 114 aa5.7□□□□□ -1.5
CIRBP-218ENST00000588344 HAMPP81172 84 aa5.7□□□□□ -1.5
CIRBP-218ENST00000588344 ANKRD39Q53RE8 183 aa5.7□□□□□ -1.5
CIRBP-218ENST00000588344 ARL17AQ8IVW1 177 aa5.7□□□□□ -1.5
CIRBP-218ENST00000588344 LINC00528Q8N1L1 170 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms