RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 CDKN2A-AS1Q9UH64 79 aa6.4□□□□□ -1.38
TPM4-207ENST00000588032 A0A096LNJ9 63 aa6.39□□□□□ -1.39
TPM4-207ENST00000588032 TRBV30A0A0K0K1B3 111 aa6.39□□□□□ -1.39
TPM4-207ENST00000588032 TLX1NBP0CAT3 122 aa6.39□□□□□ -1.39
TPM4-207ENST00000588032 C6orf226Q5I0X4 101 aa6.39□□□□□ -1.39
TPM4-207ENST00000588032 UNQ6190/PRO20217Q6UXQ8 127 aa6.39□□□□□ -1.39
TPM4-207ENST00000588032 Q8IZM0 81 aa6.39□□□□□ -1.39
TPM4-207ENST00000588032 C7orf33Q8WU49 177 aa6.39□□□□□ -1.39
TPM4-207ENST00000588032 IGLV5-45A0A087WSX0 123 aa6.38□□□□□ -1.39
TPM4-207ENST00000588032 GHRHP01286 108 aa6.38□□□□□ -1.39
TPM4-207ENST00000588032 KRTAP10-4P60372 401 aaPredicted RBP6.38□□□□□ -1.39
TPM4-207ENST00000588032 CKS1BP61024 79 aa6.38□□□□□ -1.39
TPM4-207ENST00000588032 PDZD11Q5EBL8 140 aa6.38□□□□□ -1.39
TPM4-207ENST00000588032 LINC00469Q8N7U9 141 aa6.38□□□□□ -1.39
TPM4-207ENST00000588032 H3BRM9 83 aa6.37□□□□□ -1.39
TPM4-207ENST00000588032 TRGC2P03986 189 aa6.37□□□□□ -1.39
TPM4-207ENST00000588032 CXCL5P42830 114 aa6.37□□□□□ -1.39
TPM4-207ENST00000588032 RPL18AQ02543 176 aaKnown RBP6.37□□□□□ -1.39
TPM4-207ENST00000588032 C10orf25Q5T742 122 aa6.37□□□□□ -1.39
TPM4-207ENST00000588032 TOMM7Q9P0U1 55 aa6.37□□□□□ -1.39
TPM4-207ENST00000588032 C6orf48Q9UBA6 75 aa6.37□□□□□ -1.39
TPM4-207ENST00000588032 COLCA2A8K830 154 aa6.36□□□□□ -1.39
TPM4-207ENST00000588032 IGLC3P0DOY3 106 aa6.36□□□□□ -1.39
TPM4-207ENST00000588032 NDUFA6P56556 154 aa6.36□□□□□ -1.39
TPM4-207ENST00000588032 PMCHL1Q16048 86 aa6.36□□□□□ -1.39
TPM4-207ENST00000588032 C2orf82Q6UX34 121 aa6.36□□□□□ -1.39
TPM4-207ENST00000588032 BAGE3Q86Y29 109 aa6.36□□□□□ -1.39
TPM4-207ENST00000588032 DNAH8Q96JB1 4490 aa6.36□□□□□ -1.39
TPM4-207ENST00000588032 PCLOQ9Y6V0 5065 aa6.36□□□□□ -1.39
TPM4-207ENST00000588032 SMIM1B2RUZ4 78 aa6.35□□□□□ -1.39
TPM4-207ENST00000588032 NDUFC2-KCTD14E9PQ53 114 aa6.35□□□□□ -1.39
TPM4-207ENST00000588032 F8VRH5 84 aa6.35□□□□□ -1.39
TPM4-207ENST00000588032 HSBP1O75506 76 aa6.35□□□□□ -1.39
TPM4-207ENST00000588032 C9orf116Q5BN46 136 aaPredicted RBP6.34□□□□□ -1.39
TPM4-207ENST00000588032 Q6ZRP5 223 aa6.34□□□□□ -1.39
TPM4-207ENST00000588032 COX7B2Q8TF08 81 aa6.34□□□□□ -1.39
TPM4-207ENST00000588032 A0A1W2PNN7 141 aa6.33□□□□□ -1.4
TPM4-207ENST00000588032 GAGE2EQ4V326 116 aa6.33□□□□□ -1.4
TPM4-207ENST00000588032 IFI27L1Q96BM0 104 aa6.33□□□□□ -1.4
TPM4-207ENST00000588032 GAGE2DQ9UEU5 116 aa6.33□□□□□ -1.4
TPM4-207ENST00000588032 TRAV12-1A0A0B4J245 112 aa6.32□□□□□ -1.4
TPM4-207ENST00000588032 SPINK8P0C7L1 97 aa6.32□□□□□ -1.4
TPM4-207ENST00000588032 CHTOPQ9Y3Y2 248 aaKnown RBP6.32□□□□□ -1.4
TPM4-207ENST00000588032 IGLV5-39A0A0G2JS06 123 aa6.31□□□□□ -1.4
TPM4-207ENST00000588032 KRTAP29-1A8MX34 341 aaPredicted RBP6.31□□□□□ -1.4
TPM4-207ENST00000588032 ZNF22P17026 224 aaPredicted RBP6.31□□□□□ -1.4
TPM4-207ENST00000588032 KRTAP19-1Q8IUB9 90 aa6.31□□□□□ -1.4
TPM4-207ENST00000588032 FAM19A2Q8N3H0 131 aa6.31□□□□□ -1.4
TPM4-207ENST00000588032 ABCA13Q86UQ4 5058 aa6.31□□□□□ -1.4
TPM4-207ENST00000588032 FAT1Q14517 4588 aa6.3□□□□□ -1.4
TPM4-207ENST00000588032 SERF1AO75920 110 aa6.3□□□□□ -1.4
TPM4-207ENST00000588032 LEPROTL1O95214 131 aa6.3□□□□□ -1.4
TPM4-207ENST00000588032 OXTP01178 125 aa6.3□□□□□ -1.4
TPM4-207ENST00000588032 PRR3P79522 188 aaKnown RBP6.3□□□□□ -1.4
TPM4-207ENST00000588032 TMEM170BQ5T4T1 132 aa6.3□□□□□ -1.4
TPM4-207ENST00000588032 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
TPM4-207ENST00000588032 C11orf86A6NJI1 115 aa6.29□□□□□ -1.4
TPM4-207ENST00000588032 ODF1Q14990 250 aa6.29□□□□□ -1.4
TPM4-207ENST00000588032 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
TPM4-207ENST00000588032 HSPB8Q9UJY1 196 aa6.29□□□□□ -1.4
TPM4-207ENST00000588032 HNRNPA3P51991 378 aaKnown RBP6.28□□□□□ -1.4
TPM4-207ENST00000588032 LINC00310P59036 64 aa6.28□□□□□ -1.4
TPM4-207ENST00000588032 C9orf129Q5T035 196 aaKnown RBP6.28□□□□□ -1.4
TPM4-207ENST00000588032 FAM168BA1KXE4 195 aa6.27□□□□□ -1.41
TPM4-207ENST00000588032 SCO1O75880 301 aa6.27□□□□□ -1.41
TPM4-207ENST00000588032 PHF5AQ7RTV0 110 aaKnown RBP6.27□□□□□ -1.41
TPM4-207ENST00000588032 FAM19A5Q7Z5A7 132 aaPredicted RBP6.27□□□□□ -1.41
TPM4-207ENST00000588032 TMEM223A0PJW6 202 aa6.26□□□□□ -1.41
TPM4-207ENST00000588032 M0QXV9 152 aa6.26□□□□□ -1.41
TPM4-207ENST00000588032 NUPR1O60356 82 aa6.26□□□□□ -1.41
TPM4-207ENST00000588032 COX17Q14061 63 aa6.26□□□□□ -1.41
TPM4-207ENST00000588032 SPINK6Q6UWN8 80 aa6.26□□□□□ -1.41
TPM4-207ENST00000588032 XAGE1AQ9HD64 81 aa6.26□□□□□ -1.41
TPM4-207ENST00000588032 HIST1H2BKO60814 126 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 HIST1H2BJP06899 126 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 HIST1H2BOP23527 126 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 HIST1H2BBP33778 126 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 HIST1H2BDP58876 126 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 HIST1H2BCP62807 126 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 SRSF9Q13242 221 aaKnown RBP eCLIP6.25□□□□□ -1.41
TPM4-207ENST00000588032 HIST2H2BEQ16778 126 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 LBHQ53QV2 105 aaPredicted RBP6.25□□□□□ -1.41
TPM4-207ENST00000588032 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.25□□□□□ -1.41
TPM4-207ENST00000588032 KRTAP7-1Q8IUC3 87 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 HIST1H2BHQ93079 126 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 HIST1H2BNQ99877 126 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 HIST1H2BMQ99879 126 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 PSORS1C2Q9UIG4 136 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 PLA2G2DQ9UNK4 145 aa6.25□□□□□ -1.41
TPM4-207ENST00000588032 SRRM2Q9UQ35 2752 aaKnown RBP6.24□□□□□ -1.41
TPM4-207ENST00000588032 VPS13BQ7Z7G8 4022 aa6.24□□□□□ -1.41
TPM4-207ENST00000588032 TMEM238LA0A1B0GVL6 79 aa6.24□□□□□ -1.41
TPM4-207ENST00000588032 FABP4P15090 132 aa6.24□□□□□ -1.41
TPM4-207ENST00000588032 PLNP26678 52 aa6.24□□□□□ -1.41
TPM4-207ENST00000588032 UBE2BP63146 152 aa6.24□□□□□ -1.41
TPM4-207ENST00000588032 MAP1LC3CQ9BXW4 147 aa6.24□□□□□ -1.41
TPM4-207ENST00000588032 TP73-AS1Q9UF72 201 aa6.24□□□□□ -1.41
TPM4-207ENST00000588032 ERG28Q9UKR5 140 aa6.24□□□□□ -1.41
TPM4-207ENST00000588032 FLG2Q5D862 2391 aaPredicted RBP6.23□□□□□ -1.41
TPM4-207ENST00000588032 H0Y8G0 127 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms