RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 SMIM1B2RUZ4 78 aa8.99□□□□□ -0.97
TPM4-205ENST00000586833 UNQ6190/PRO20217Q6UXQ8 127 aa8.99□□□□□ -0.97
TPM4-205ENST00000586833 FAM19A2Q8N3H0 131 aa8.99□□□□□ -0.97
TPM4-205ENST00000586833 STPG4Q8N801 248 aa8.99□□□□□ -0.97
TPM4-205ENST00000586833 COX7B2Q8TF08 81 aa8.99□□□□□ -0.97
TPM4-205ENST00000586833 PLAC8Q9NZF1 115 aa8.99□□□□□ -0.97
TPM4-205ENST00000586833 F8VRH5 84 aa8.98□□□□□ -0.97
TPM4-205ENST00000586833 TLX1NBP0CAT3 122 aa8.98□□□□□ -0.97
TPM4-205ENST00000586833 TMEM170BQ5T4T1 132 aa8.98□□□□□ -0.97
TPM4-205ENST00000586833 SFTA2Q6UW10 78 aa8.98□□□□□ -0.97
TPM4-205ENST00000586833 C6orf48Q9UBA6 75 aa8.98□□□□□ -0.97
TPM4-205ENST00000586833 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
TPM4-205ENST00000586833 NDUFC2-KCTD14E9PQ53 114 aa8.96□□□□□ -0.98
TPM4-205ENST00000586833 PANO1I0J062 215 aa8.96□□□□□ -0.98
TPM4-205ENST00000586833 ZNF22P17026 224 aaPredicted RBP8.96□□□□□ -0.98
TPM4-205ENST00000586833 RPL37AP61513 92 aaKnown RBP8.96□□□□□ -0.98
TPM4-205ENST00000586833 C10orf25Q5T742 122 aa8.96□□□□□ -0.98
TPM4-205ENST00000586833 C2orf82Q6UX34 121 aa8.96□□□□□ -0.98
TPM4-205ENST00000586833 HIST1H2BKO60814 126 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 ATP6V1G1O75348 118 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 HIST1H2BJP06899 126 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 INAFM2P0DMQ5 153 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 HIST1H2BOP23527 126 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 HIST1H2BBP33778 126 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 HIST1H2BDP58876 126 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 HIST1H2BCP62807 126 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 HIST2H2BEQ16778 126 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.95□□□□□ -0.98
TPM4-205ENST00000586833 HIST1H2BHQ93079 126 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 HIST1H2BNQ99877 126 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 HIST1H2BMQ99879 126 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 MAP1LC3CQ9BXW4 147 aa8.95□□□□□ -0.98
TPM4-205ENST00000586833 C11orf86A6NJI1 115 aa8.94□□□□□ -0.98
TPM4-205ENST00000586833 H0Y8G0 127 aa8.94□□□□□ -0.98
TPM4-205ENST00000586833 FABP4P15090 132 aa8.94□□□□□ -0.98
TPM4-205ENST00000586833 GAGE2EQ4V326 116 aa8.94□□□□□ -0.98
TPM4-205ENST00000586833 GAGE2DQ9UEU5 116 aa8.94□□□□□ -0.98
TPM4-205ENST00000586833 PLNP26678 52 aa8.93□□□□□ -0.98
TPM4-205ENST00000586833 IGLV5-39A0A0G2JS06 123 aa8.92□□□□□ -0.98
TPM4-205ENST00000586833 LINC00310P59036 64 aa8.92□□□□□ -0.98
TPM4-205ENST00000586833 Q6ZRP5 223 aa8.92□□□□□ -0.98
TPM4-205ENST00000586833 FAT1Q14517 4588 aa8.92□□□□□ -0.98
TPM4-205ENST00000586833 HERVK_113P61574 105 aa8.91□□□□□ -0.98
TPM4-205ENST00000586833 C9orf116Q5BN46 136 aaPredicted RBP8.91□□□□□ -0.98
TPM4-205ENST00000586833 KRTAP4-5Q9BYR2 181 aa8.9□□□□□ -0.98
TPM4-205ENST00000586833 TMEM223A0PJW6 202 aa8.89□□□□□ -0.99
TPM4-205ENST00000586833 NUPR1O60356 82 aa8.89□□□□□ -0.99
TPM4-205ENST00000586833 DPM2O94777 84 aa8.89□□□□□ -0.99
TPM4-205ENST00000586833 ODF1Q14990 250 aa8.89□□□□□ -0.99
TPM4-205ENST00000586833 A0A1W2PNN7 141 aa8.87□□□□□ -0.99
TPM4-205ENST00000586833 LINC00587B1AMM8 73 aa8.87□□□□□ -0.99
TPM4-205ENST00000586833 IGKCP01834 107 aa8.87□□□□□ -0.99
TPM4-205ENST00000586833 COX17Q14061 63 aa8.87□□□□□ -0.99
TPM4-205ENST00000586833 COA6Q5JTJ3 125 aaKnown RBP8.87□□□□□ -0.99
TPM4-205ENST00000586833 FAM19A5Q7Z5A7 132 aaPredicted RBP8.86□□□□□ -0.99
TPM4-205ENST00000586833 KRTAP17-1Q9BYP8 105 aa8.86□□□□□ -0.99
TPM4-205ENST00000586833 ABCA13Q86UQ4 5058 aa8.86□□□□□ -0.99
TPM4-205ENST00000586833 AKR1D1P51857 326 aa8.85□□□□□ -0.99
TPM4-205ENST00000586833 HERV-K104P63124 156 aa8.85□□□□□ -0.99
TPM4-205ENST00000586833 LBHQ53QV2 105 aaPredicted RBP8.85□□□□□ -0.99
TPM4-205ENST00000586833 PET117Q6UWS5 81 aa8.85□□□□□ -0.99
TPM4-205ENST00000586833 PLEKHB2Q96CS7 222 aa8.85□□□□□ -0.99
TPM4-205ENST00000586833 ERG28Q9UKR5 140 aa8.85□□□□□ -0.99
TPM4-205ENST00000586833 C20orf202A1L168 122 aa8.84□□□□□ -0.99
TPM4-205ENST00000586833 SYS1-DBNDD2H3BUS1 97 aa8.84□□□□□ -0.99
TPM4-205ENST00000586833 M0QXV9 152 aa8.84□□□□□ -0.99
TPM4-205ENST00000586833 MYMXA0A1B0GTQ4 84 aa8.83□□□□□ -1
TPM4-205ENST00000586833 S100A6P06703 90 aa8.83□□□□□ -1
TPM4-205ENST00000586833 PFN2P35080 140 aa8.83□□□□□ -1
TPM4-205ENST00000586833 UBE2BP63146 152 aa8.83□□□□□ -1
TPM4-205ENST00000586833 XAGE1AQ9HD64 81 aa8.83□□□□□ -1
TPM4-205ENST00000586833 LEPROTO15243 131 aa8.82□□□□□ -1
TPM4-205ENST00000586833 LGALS3P17931 250 aaKnown RBP8.82□□□□□ -1
TPM4-205ENST00000586833 PRR3P79522 188 aaKnown RBP8.82□□□□□ -1
TPM4-205ENST00000586833 MEIG1Q5JSS6 88 aa8.82□□□□□ -1
TPM4-205ENST00000586833 C9orf129Q5T035 196 aaKnown RBP8.82□□□□□ -1
TPM4-205ENST00000586833 PHF5AQ7RTV0 110 aaKnown RBP8.82□□□□□ -1
TPM4-205ENST00000586833 S100A2P29034 98 aa8.81□□□□□ -1
TPM4-205ENST00000586833 NMUP48645 174 aa8.81□□□□□ -1
TPM4-205ENST00000586833 LINC00158P58513 81 aa8.81□□□□□ -1
TPM4-205ENST00000586833 ZNF625Q96I27 306 aaPredicted RBP8.81□□□□□ -1
TPM4-205ENST00000586833 PMCHL2Q9BQD1 86 aa8.81□□□□□ -1
TPM4-205ENST00000586833 NDUFA12Q9UI09 145 aa8.81□□□□□ -1
TPM4-205ENST00000586833 FAM168BA1KXE4 195 aa8.8□□□□□ -1
TPM4-205ENST00000586833 KRTDAPP60985 99 aa8.8□□□□□ -1
TPM4-205ENST00000586833 RPL24P83731 157 aaKnown RBP8.8□□□□□ -1
TPM4-205ENST00000586833 NKAPP1Q8N9T2 125 aa8.8□□□□□ -1
TPM4-205ENST00000586833 TP73-AS1Q9UF72 201 aa8.8□□□□□ -1
TPM4-205ENST00000586833 PLA2G2DQ9UNK4 145 aa8.8□□□□□ -1
TPM4-205ENST00000586833 PCLOQ9Y6V0 5065 aa8.79□□□□□ -1
TPM4-205ENST00000586833 KRTAP10-4P60372 401 aaPredicted RBP8.79□□□□□ -1
TPM4-205ENST00000586833 LINC01545Q5VT33 79 aa8.79□□□□□ -1
TPM4-205ENST00000586833 C22orf24Q9Y442 160 aa8.79□□□□□ -1
TPM4-205ENST00000586833 J3QQQ9 107 aa8.78□□□□□ -1
TPM4-205ENST00000586833 VPS13BQ7Z7G8 4022 aa8.78□□□□□ -1
TPM4-205ENST00000586833 C3orf79P0CE67 100 aa8.77□□□□□ -1.01
TPM4-205ENST00000586833 C1orf137Q5JT78 98 aa8.77□□□□□ -1.01
TPM4-205ENST00000586833 MRPL55Q7Z7F7 128 aaKnown RBP8.77□□□□□ -1.01
TPM4-205ENST00000586833 E9PLD3 99 aa8.76□□□□□ -1.01
TPM4-205ENST00000586833 J3QL48 77 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms