RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 C1orf137Q5JT78 98 aa9.12□□□□□ -0.95
SF3A2-202ENST00000586396 COMMD7Q86VX2 200 aa9.12□□□□□ -0.95
SF3A2-202ENST00000586396 PRR26Q8N8Z3 221 aa9.12□□□□□ -0.95
SF3A2-202ENST00000586396 ZC2HC1BQ5TFG8 222 aa9.11□□□□□ -0.95
SF3A2-202ENST00000586396 CXCL5P42830 114 aa9.1□□□□□ -0.95
SF3A2-202ENST00000586396 KIAA1644Q3SXP7 199 aa9.1□□□□□ -0.95
SF3A2-202ENST00000586396 C2orf82Q6UX34 121 aa9.1□□□□□ -0.95
SF3A2-202ENST00000586396 PHF5AQ7RTV0 110 aaKnown RBP9.1□□□□□ -0.95
SF3A2-202ENST00000586396 CDKN2A-AS1Q9UH64 79 aa9.1□□□□□ -0.95
SF3A2-202ENST00000586396 TINCRA0A1B0GVN0 87 aa9.09□□□□□ -0.95
SF3A2-202ENST00000586396 DIRC1Q969H9 104 aa9.09□□□□□ -0.95
SF3A2-202ENST00000586396 PACRGQ96M98 296 aaPredicted RBP9.09□□□□□ -0.95
SF3A2-202ENST00000586396 FAM168BA1KXE4 195 aa9.08□□□□□ -0.96
SF3A2-202ENST00000586396 C9orf129Q5T035 196 aaKnown RBP9.08□□□□□ -0.96
SF3A2-202ENST00000586396 SMIM1B2RUZ4 78 aa9.07□□□□□ -0.96
SF3A2-202ENST00000586396 F8VRH5 84 aa9.07□□□□□ -0.96
SF3A2-202ENST00000586396 PRR4Q16378 134 aa9.07□□□□□ -0.96
SF3A2-202ENST00000586396 KRTAP11-1Q8IUC1 163 aa9.07□□□□□ -0.96
SF3A2-202ENST00000586396 MRPL18Q9H0U6 180 aaKnown RBP9.07□□□□□ -0.96
SF3A2-202ENST00000586396 IGLV7-43P04211 117 aa9.06□□□□□ -0.96
SF3A2-202ENST00000586396 PDZD11Q5EBL8 140 aa9.06□□□□□ -0.96
SF3A2-202ENST00000586396 SCGB3A1Q96QR1 104 aa9.06□□□□□ -0.96
SF3A2-202ENST00000586396 GEMIN7Q9H840 131 aaKnown RBP9.06□□□□□ -0.96
SF3A2-202ENST00000586396 A0A096LNJ9 63 aa9.05□□□□□ -0.96
SF3A2-202ENST00000586396 H0Y9J4 135 aa9.05□□□□□ -0.96
SF3A2-202ENST00000586396 PRSS2P07478 247 aa9.05□□□□□ -0.96
SF3A2-202ENST00000586396 CKS1BP61024 79 aa9.05□□□□□ -0.96
SF3A2-202ENST00000586396 CST9LQ9H4G1 147 aa9.05□□□□□ -0.96
SF3A2-202ENST00000586396 M0QXV9 152 aa9.04□□□□□ -0.96
SF3A2-202ENST00000586396 PMVKQ15126 192 aa9.04□□□□□ -0.96
SF3A2-202ENST00000586396 GAGE2EQ4V326 116 aa9.04□□□□□ -0.96
SF3A2-202ENST00000586396 C6orf226Q5I0X4 101 aa9.04□□□□□ -0.96
SF3A2-202ENST00000586396 GAGE2DQ9UEU5 116 aa9.04□□□□□ -0.96
SF3A2-202ENST00000586396 TP73-AS1Q9UF72 201 aa9.04□□□□□ -0.96
SF3A2-202ENST00000586396 IGLV1-50A0A075B6I6 118 aa9.03□□□□□ -0.96
SF3A2-202ENST00000586396 FAM19A5Q7Z5A7 132 aaPredicted RBP9.03□□□□□ -0.96
SF3A2-202ENST00000586396 URB1-AS1Q96HZ7 61 aa9.03□□□□□ -0.96
SF3A2-202ENST00000586396 RPS10P5Q9NQ39 176 aa9.03□□□□□ -0.96
SF3A2-202ENST00000586396 FABP9Q0Z7S8 132 aa9.02□□□□□ -0.97
SF3A2-202ENST00000586396 FA2HQ7L5A8 372 aa9.02□□□□□ -0.97
SF3A2-202ENST00000586396 LINC00469Q8N7U9 141 aa9.02□□□□□ -0.97
SF3A2-202ENST00000586396 C18orf32Q8TCD1 76 aa9.02□□□□□ -0.97
SF3A2-202ENST00000586396 IGLV5-39A0A0G2JS06 123 aa9.01□□□□□ -0.97
SF3A2-202ENST00000586396 KRTAP9-6A0A140TA67 174 aa9.01□□□□□ -0.97
SF3A2-202ENST00000586396 IGLC3P0DOY3 106 aa9.01□□□□□ -0.97
SF3A2-202ENST00000586396 TOMM7Q9P0U1 55 aa9.01□□□□□ -0.97
SF3A2-202ENST00000586396 SNAPINO95295 136 aa9□□□□□ -0.97
SF3A2-202ENST00000586396 SVBPQ8N300 66 aa9□□□□□ -0.97
SF3A2-202ENST00000586396 YPEL4Q96NS1 127 aa9□□□□□ -0.97
SF3A2-202ENST00000586396 SMCO4Q9NRQ5 59 aa9□□□□□ -0.97
SF3A2-202ENST00000586396 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
SF3A2-202ENST00000586396 NUPR1O60356 82 aa8.99□□□□□ -0.97
SF3A2-202ENST00000586396 KRTAP1-4P0C5Y4 121 aa8.99□□□□□ -0.97
SF3A2-202ENST00000586396 RPL13AP40429 203 aaKnown RBP8.99□□□□□ -0.97
SF3A2-202ENST00000586396 COX7B2Q8TF08 81 aa8.99□□□□□ -0.97
SF3A2-202ENST00000586396 HBDP02042 147 aa8.98□□□□□ -0.97
SF3A2-202ENST00000586396 LINC00614P0C842 121 aa8.98□□□□□ -0.97
SF3A2-202ENST00000586396 TRAPPC1Q9Y5R8 145 aa8.98□□□□□ -0.97
SF3A2-202ENST00000586396 H3BRM9 83 aa8.97□□□□□ -0.97
SF3A2-202ENST00000586396 LBHQ53QV2 105 aaPredicted RBP8.97□□□□□ -0.97
SF3A2-202ENST00000586396 LCE2AQ5TA79 106 aaPredicted RBP8.97□□□□□ -0.97
SF3A2-202ENST00000586396 C22orf24Q9Y442 160 aa8.97□□□□□ -0.97
SF3A2-202ENST00000586396 APOC3P02656 99 aa8.96□□□□□ -0.98
SF3A2-202ENST00000586396 RAB5BP61020 215 aa8.96□□□□□ -0.98
SF3A2-202ENST00000586396 UBE2BP63146 152 aa8.96□□□□□ -0.98
SF3A2-202ENST00000586396 NDUFA5Q16718 116 aa8.96□□□□□ -0.98
SF3A2-202ENST00000586396 XAGE1AQ9HD64 81 aa8.96□□□□□ -0.98
SF3A2-202ENST00000586396 SFTA2Q6UW10 78 aa8.95□□□□□ -0.98
SF3A2-202ENST00000586396 ZNF861PO60384 105 aa8.94□□□□□ -0.98
SF3A2-202ENST00000586396 ATP5LO75964 103 aa8.94□□□□□ -0.98
SF3A2-202ENST00000586396 SPINK8P0C7L1 97 aa8.94□□□□□ -0.98
SF3A2-202ENST00000586396 ZNF22P17026 224 aaPredicted RBP8.94□□□□□ -0.98
SF3A2-202ENST00000586396 MRPL55Q7Z7F7 128 aaKnown RBP8.94□□□□□ -0.98
SF3A2-202ENST00000586396 COX17Q14061 63 aa8.92□□□□□ -0.98
SF3A2-202ENST00000586396 CHCHD1Q96BP2 118 aaKnown RBP8.92□□□□□ -0.98
SF3A2-202ENST00000586396 TRAV12-1A0A0B4J245 112 aa8.9□□□□□ -0.98
SF3A2-202ENST00000586396 BCE1O60756 84 aa8.9□□□□□ -0.98
SF3A2-202ENST00000586396 TSPAN13O95857 204 aa8.9□□□□□ -0.98
SF3A2-202ENST00000586396 KRTAP13-1Q8IUC0 172 aa8.9□□□□□ -0.98
SF3A2-202ENST00000586396 C11orf86A6NJI1 115 aa8.89□□□□□ -0.99
SF3A2-202ENST00000586396 ZNF625Q96I27 306 aaPredicted RBP8.88□□□□□ -0.99
SF3A2-202ENST00000586396 LINC00167Q96N53 147 aa8.88□□□□□ -0.99
SF3A2-202ENST00000586396 MUC17Q685J3 4493 aa8.88□□□□□ -0.99
SF3A2-202ENST00000586396 PMCHL1Q16048 86 aa8.87□□□□□ -0.99
SF3A2-202ENST00000586396 BAGE3Q86Y29 109 aa8.87□□□□□ -0.99
SF3A2-202ENST00000586396 RPL28P46779 137 aaKnown RBP8.86□□□□□ -0.99
SF3A2-202ENST00000586396 ERG28Q9UKR5 140 aa8.86□□□□□ -0.99
SF3A2-202ENST00000586396 VPREB1P12018 145 aa8.85□□□□□ -0.99
SF3A2-202ENST00000586396 SND1-IT1Q9HBX3 110 aa8.84□□□□□ -0.99
SF3A2-202ENST00000586396 CHTOPQ9Y3Y2 248 aaKnown RBP8.84□□□□□ -0.99
SF3A2-202ENST00000586396 TMEM223A0PJW6 202 aa8.83□□□□□ -1
SF3A2-202ENST00000586396 NDUFA6P56556 154 aa8.83□□□□□ -1
SF3A2-202ENST00000586396 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
SF3A2-202ENST00000586396 TMEM170BQ5T4T1 132 aa8.82□□□□□ -1
SF3A2-202ENST00000586396 NKAPP1Q8N9T2 125 aa8.82□□□□□ -1
SF3A2-202ENST00000586396 RPL24P83731 157 aaKnown RBP8.81□□□□□ -1
SF3A2-202ENST00000586396 CBLN2Q8IUK8 224 aa8.81□□□□□ -1
SF3A2-202ENST00000586396 A0A087X002 238 aa8.8□□□□□ -1
SF3A2-202ENST00000586396 RPL37AP8A6NKH3 93 aa8.8□□□□□ -1
SF3A2-202ENST00000586396 PFN2P35080 140 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms