RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 DEFB130BP0DP73 79 aa9.89□□□□□ -0.83
CDK5RAP3-237ENST00000585163 DEFB130AP0DP74 79 aa9.89□□□□□ -0.83
CDK5RAP3-237ENST00000585163 LINC00612Q8N6U2 182 aa9.89□□□□□ -0.83
CDK5RAP3-237ENST00000585163 PFN2P35080 140 aa9.88□□□□□ -0.83
CDK5RAP3-237ENST00000585163 LINC00643Q86TS7 51 aa9.88□□□□□ -0.83
CDK5RAP3-237ENST00000585163 H0YGX0 51 aa9.87□□□□□ -0.83
CDK5RAP3-237ENST00000585163 ANK3Q12955 4377 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-237ENST00000585163 A0A087WYN8 130 aa9.87□□□□□ -0.83
CDK5RAP3-237ENST00000585163 A0A1B0GUV1 79 aa9.86□□□□□ -0.83
CDK5RAP3-237ENST00000585163 DNAL4O96015 105 aa9.86□□□□□ -0.83
CDK5RAP3-237ENST00000585163 GYPEP15421 78 aa9.86□□□□□ -0.83
CDK5RAP3-237ENST00000585163 C6orf226Q5I0X4 101 aa9.86□□□□□ -0.83
CDK5RAP3-237ENST00000585163 PDZD2O15018 2839 aa9.85□□□□□ -0.83
CDK5RAP3-237ENST00000585163 ACANP16112 2415 aa9.85□□□□□ -0.83
CDK5RAP3-237ENST00000585163 PAX4O43316 350 aa9.85□□□□□ -0.83
CDK5RAP3-237ENST00000585163 HILS1P60008 231 aa9.85□□□□□ -0.83
CDK5RAP3-237ENST00000585163 MTORP42345 2549 aa9.84□□□□□ -0.83
CDK5RAP3-237ENST00000585163 XCL1P47992 114 aa9.84□□□□□ -0.83
CDK5RAP3-237ENST00000585163 SS18Q15532 418 aa9.84□□□□□ -0.83
CDK5RAP3-237ENST00000585163 GAGE2AQ6NT46 116 aa9.83□□□□□ -0.84
CDK5RAP3-237ENST00000585163 Q8IZM0 81 aa9.83□□□□□ -0.84
CDK5RAP3-237ENST00000585163 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
CDK5RAP3-237ENST00000585163 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
CDK5RAP3-237ENST00000585163 LY6G6DO95868 133 aa9.83□□□□□ -0.84
CDK5RAP3-237ENST00000585163 C11orf68Q9H3H3 251 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-237ENST00000585163 C3orf56Q8N813 242 aa9.82□□□□□ -0.84
CDK5RAP3-237ENST00000585163 V9GYY9 64 aa9.82□□□□□ -0.84
CDK5RAP3-237ENST00000585163 X6R8D5 127 aa9.82□□□□□ -0.84
CDK5RAP3-237ENST00000585163 ATP5G1P05496 136 aa9.82□□□□□ -0.84
CDK5RAP3-237ENST00000585163 OBSCN-AS1Q96MR7 158 aa9.82□□□□□ -0.84
CDK5RAP3-237ENST00000585163 PRO0255Q9UI72 69 aa9.82□□□□□ -0.84
CDK5RAP3-237ENST00000585163 TENM4Q6N022 2769 aa9.82□□□□□ -0.84
CDK5RAP3-237ENST00000585163 LECT2O14960 151 aa9.81□□□□□ -0.84
CDK5RAP3-237ENST00000585163 C9orf129Q5T035 196 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-237ENST00000585163 PRO0628Q9UI54 55 aa9.81□□□□□ -0.84
CDK5RAP3-237ENST00000585163 LINC01561Q8N1V8 128 aa9.81□□□□□ -0.84
CDK5RAP3-237ENST00000585163 CXCL5P42830 114 aa9.8□□□□□ -0.84
CDK5RAP3-237ENST00000585163 CLPSL2Q6UWE3 100 aa9.8□□□□□ -0.84
CDK5RAP3-237ENST00000585163 LINC00482Q8N8I6 264 aa9.8□□□□□ -0.84
CDK5RAP3-237ENST00000585163 FN1P02751 2386 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-237ENST00000585163 KRTAP10-3P60369 221 aa9.79□□□□□ -0.84
CDK5RAP3-237ENST00000585163 C14orf132Q9NPU4 83 aa9.79□□□□□ -0.84
CDK5RAP3-237ENST00000585163 A0A096LPF7 62 aa9.78□□□□□ -0.84
CDK5RAP3-237ENST00000585163 C1orf43Q9BWL3 253 aa9.78□□□□□ -0.84
CDK5RAP3-237ENST00000585163 KLK5Q9Y337 293 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-237ENST00000585163 GCN1Q92616 2671 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-237ENST00000585163 KIAA0087Q14695 138 aa9.76□□□□□ -0.85
CDK5RAP3-237ENST00000585163 CD164L2Q6UWJ8 174 aa9.76□□□□□ -0.85
CDK5RAP3-237ENST00000585163 HRCT1Q6UXD1 115 aa9.76□□□□□ -0.85
CDK5RAP3-237ENST00000585163 LINC00269Q8N2A0 174 aa9.76□□□□□ -0.85
CDK5RAP3-237ENST00000585163 LYRM9A8MSI8 78 aa9.76□□□□□ -0.85
CDK5RAP3-237ENST00000585163 ITPR2Q14571 2701 aa9.75□□□□□ -0.85
CDK5RAP3-237ENST00000585163 SLPIP03973 132 aa9.75□□□□□ -0.85
CDK5RAP3-237ENST00000585163 COX17Q14061 63 aa9.75□□□□□ -0.85
CDK5RAP3-237ENST00000585163 C4orf26Q17RF5 130 aa9.75□□□□□ -0.85
CDK5RAP3-237ENST00000585163 ORMDL1Q9P0S3 153 aa9.75□□□□□ -0.85
CDK5RAP3-237ENST00000585163 NBEAL2Q6ZNJ1 2754 aa9.75□□□□□ -0.85
CDK5RAP3-237ENST00000585163 NANOS2P60321 138 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-237ENST00000585163 C9orf153Q5TBE3 101 aa9.75□□□□□ -0.85
CDK5RAP3-237ENST00000585163 NDUFC2O95298 119 aa9.74□□□□□ -0.85
CDK5RAP3-237ENST00000585163 NCR3O14931 201 aa9.74□□□□□ -0.85
CDK5RAP3-237ENST00000585163 CHCHD10Q8WYQ3 142 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-237ENST00000585163 LINC00167Q96N53 147 aa9.74□□□□□ -0.85
CDK5RAP3-237ENST00000585163 IGHV4-28A0A0C4DH34 117 aa9.73□□□□□ -0.85
CDK5RAP3-237ENST00000585163 PRR3P79522 188 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-237ENST00000585163 KMT2BQ9UMN6 2715 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-237ENST00000585163 REG3AQ06141 175 aa9.72□□□□□ -0.85
CDK5RAP3-237ENST00000585163 LINC00846Q9NV44 126 aa9.72□□□□□ -0.85
CDK5RAP3-237ENST00000585163 Q8N3U1 123 aa9.72□□□□□ -0.85
CDK5RAP3-237ENST00000585163 IGLV10-54A0A075B6I4 117 aa9.71□□□□□ -0.85
CDK5RAP3-237ENST00000585163 ANGP03950 147 aaKnown RBP9.71□□□□□ -0.85
CDK5RAP3-237ENST00000585163 HIST1H4AP62805 103 aaKnown RBP9.71□□□□□ -0.85
CDK5RAP3-237ENST00000585163 C3orf22Q8N5N4 141 aa9.71□□□□□ -0.85
CDK5RAP3-237ENST00000585163 Q8N814 137 aa9.71□□□□□ -0.86
CDK5RAP3-237ENST00000585163 SMR3AQ99954 134 aa9.71□□□□□ -0.86
CDK5RAP3-237ENST00000585163 DEFB4AO15263 64 aa9.7□□□□□ -0.86
CDK5RAP3-237ENST00000585163 DEFB135Q30KP9 77 aa9.7□□□□□ -0.86
CDK5RAP3-237ENST00000585163 Q5XG85 94 aa9.7□□□□□ -0.86
CDK5RAP3-237ENST00000585163 Q6JHZ5 121 aa9.7□□□□□ -0.86
CDK5RAP3-237ENST00000585163 SPATA3Q8NHX4 192 aa9.7□□□□□ -0.86
CDK5RAP3-237ENST00000585163 UQCRQO14949 82 aa9.69□□□□□ -0.86
CDK5RAP3-237ENST00000585163 C9orf116Q5BN46 136 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-237ENST00000585163 VWFP04275 2813 aa9.69□□□□□ -0.86
CDK5RAP3-237ENST00000585163 HIVEP2P31629 2446 aa9.69□□□□□ -0.86
CDK5RAP3-237ENST00000585163 C9orf66Q5T8R8 295 aa9.68□□□□□ -0.86
CDK5RAP3-237ENST00000585163 LINC00526Q96FQ7 95 aa9.68□□□□□ -0.86
CDK5RAP3-237ENST00000585163 PKIGQ9Y2B9 76 aa9.68□□□□□ -0.86
CDK5RAP3-237ENST00000585163 CCKP06307 115 aa9.67□□□□□ -0.86
CDK5RAP3-237ENST00000585163 DAD1P61803 113 aa9.67□□□□□ -0.86
CDK5RAP3-237ENST00000585163 JMJD7-PLA2G4BH0Y9G9 81 aa9.67□□□□□ -0.86
CDK5RAP3-237ENST00000585163 TMEM256-PLSCR3K7ERE1 68 aa9.67□□□□□ -0.86
CDK5RAP3-237ENST00000585163 Q8NDZ9 215 aa9.66□□□□□ -0.86
CDK5RAP3-237ENST00000585163 IGKV3D-7A0A0C4DH55 119 aa9.66□□□□□ -0.86
CDK5RAP3-237ENST00000585163 APOC4P55056 127 aa9.66□□□□□ -0.86
CDK5RAP3-237ENST00000585163 UNC79Q9P2D8 2635 aa9.66□□□□□ -0.86
CDK5RAP3-237ENST00000585163 ATOX1O00244 68 aa9.65□□□□□ -0.86
CDK5RAP3-237ENST00000585163 COX7CP15954 63 aa9.65□□□□□ -0.86
CDK5RAP3-237ENST00000585163 CELA1Q9UNI1 258 aa9.65□□□□□ -0.86
CDK5RAP3-237ENST00000585163 C6orf99Q4VX62 202 aa9.64□□□□□ -0.87
CDK5RAP3-237ENST00000585163 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms