RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
TVP23C-210ENST00000584811 IGKV2-28A0A075B6P5 120 aa10.85□□□□□ -0.67
TVP23C-210ENST00000584811 IGKV2D-28P01615 120 aa10.85□□□□□ -0.67
TVP23C-210ENST00000584811 COL6A5A8TX70 2615 aa10.85□□□□□ -0.67
TVP23C-210ENST00000584811 TRBV10-2A0A0K0K1G8 114 aa10.84□□□□□ -0.67
TVP23C-210ENST00000584811 LYRM9A8MSI8 78 aa10.84□□□□□ -0.67
TVP23C-210ENST00000584811 LST1O00453 97 aa10.84□□□□□ -0.67
TVP23C-210ENST00000584811 MT-ATP8P03928 68 aa10.84□□□□□ -0.67
TVP23C-210ENST00000584811 COX6CP09669 75 aa10.84□□□□□ -0.67
TVP23C-210ENST00000584811 APOC4P55056 127 aa10.84□□□□□ -0.67
TVP23C-210ENST00000584811 XGP55808 180 aa10.84□□□□□ -0.67
TVP23C-210ENST00000584811 FAM218AQ96MZ4 157 aa10.83□□□□□ -0.68
TVP23C-210ENST00000584811 ANGP03950 147 aaKnown RBP10.83□□□□□ -0.68
TVP23C-210ENST00000584811 C6orf226Q5I0X4 101 aa10.83□□□□□ -0.68
TVP23C-210ENST00000584811 CCL18P55774 89 aa10.82□□□□□ -0.68
TVP23C-210ENST00000584811 SND1-IT1Q9HBX3 110 aa10.82□□□□□ -0.68
TVP23C-210ENST00000584811 SHISA2Q6UWI4 295 aa10.82□□□□□ -0.68
TVP23C-210ENST00000584811 A0A1B0GUV1 79 aa10.81□□□□□ -0.68
TVP23C-210ENST00000584811 WFDC9Q8NEX5 89 aa10.81□□□□□ -0.68
TVP23C-210ENST00000584811 LINC00526Q96FQ7 95 aa10.81□□□□□ -0.68
TVP23C-210ENST00000584811 KRTAP10-11P60412 298 aa10.8□□□□□ -0.68
TVP23C-210ENST00000584811 NBEAL1Q6ZS30 2694 aa10.8□□□□□ -0.68
TVP23C-210ENST00000584811 ATP5G1P05496 136 aa10.8□□□□□ -0.68
TVP23C-210ENST00000584811 SS18Q15532 418 aa10.8□□□□□ -0.68
TVP23C-210ENST00000584811 C9orf116Q5BN46 136 aaPredicted RBP10.8□□□□□ -0.68
TVP23C-210ENST00000584811 TRAV8-4A0A0B4J246 113 aa10.8□□□□□ -0.68
TVP23C-210ENST00000584811 PRR3P79522 188 aaKnown RBP10.8□□□□□ -0.68
TVP23C-210ENST00000584811 CHCHD10Q8WYQ3 142 aaPredicted RBP10.78□□□□□ -0.68
TVP23C-210ENST00000584811 COX7A2LO14548 114 aa10.78□□□□□ -0.68
TVP23C-210ENST00000584811 REG3AQ06141 175 aa10.78□□□□□ -0.68
TVP23C-210ENST00000584811 Q9HAA7 133 aa10.77□□□□□ -0.68
TVP23C-210ENST00000584811 MIFP14174 115 aa10.77□□□□□ -0.69
TVP23C-210ENST00000584811 SPART-AS1P0CW21 52 aa10.77□□□□□ -0.69
TVP23C-210ENST00000584811 UBE2WQ96B02 151 aa10.77□□□□□ -0.69
TVP23C-210ENST00000584811 CRPP02741 224 aa10.76□□□□□ -0.69
TVP23C-210ENST00000584811 KRTAP24-1Q3LI83 254 aa10.76□□□□□ -0.69
TVP23C-210ENST00000584811 IBA57-AS1B1ANH7 110 aa10.75□□□□□ -0.69
TVP23C-210ENST00000584811 SMIM11BQ8TCY0 68 aa10.75□□□□□ -0.69
TVP23C-210ENST00000584811 C6orf223Q8N319 242 aa10.75□□□□□ -0.69
TVP23C-210ENST00000584811 M0QXV9 152 aa10.74□□□□□ -0.69
TVP23C-210ENST00000584811 KIAA0087Q14695 138 aa10.74□□□□□ -0.69
TVP23C-210ENST00000584811 KLK12Q9UKR0 248 aa10.74□□□□□ -0.69
TVP23C-210ENST00000584811 COPS9Q8WXC6 57 aa10.74□□□□□ -0.69
TVP23C-210ENST00000584811 A0A087WYN8 130 aa10.73□□□□□ -0.69
TVP23C-210ENST00000584811 SCGB1A1P11684 91 aa10.73□□□□□ -0.69
TVP23C-210ENST00000584811 OR13C6PQ8NH95 151 aa10.73□□□□□ -0.69
TVP23C-210ENST00000584811 CD164L2Q6UWJ8 174 aa10.72□□□□□ -0.69
TVP23C-210ENST00000584811 H3BT86 120 aa10.72□□□□□ -0.69
TVP23C-210ENST00000584811 C10orf25Q5T742 122 aa10.72□□□□□ -0.69
TVP23C-210ENST00000584811 Q8IZM0 81 aa10.72□□□□□ -0.69
TVP23C-210ENST00000584811 Q8NDZ9 215 aa10.72□□□□□ -0.69
TVP23C-210ENST00000584811 C22orf24Q9Y442 160 aa10.72□□□□□ -0.69
TVP23C-210ENST00000584811 MALP21145 153 aa10.71□□□□□ -0.69
TVP23C-210ENST00000584811 MRPL23Q16540 153 aaKnown RBP10.71□□□□□ -0.69
TVP23C-210ENST00000584811 TRAV13-2A0A0B4J235 113 aa10.71□□□□□ -0.69
TVP23C-210ENST00000584811 SS18L2Q9UHA2 77 aa10.71□□□□□ -0.69
TVP23C-210ENST00000584811 WIPF1O43516 503 aa10.7□□□□□ -0.7
TVP23C-210ENST00000584811 LINC01600Q96MT4 127 aa10.7□□□□□ -0.7
TVP23C-210ENST00000584811 RPL28P46779 137 aaKnown RBP10.7□□□□□ -0.7
TVP23C-210ENST00000584811 Q6ZTC4 211 aa10.7□□□□□ -0.7
TVP23C-210ENST00000584811 PRB2P02812 416 aaPredicted RBP10.69□□□□□ -0.7
TVP23C-210ENST00000584811 C9orf129Q5T035 196 aaKnown RBP10.69□□□□□ -0.7
TVP23C-210ENST00000584811 BAALC-AS2P0C853 105 aa10.68□□□□□ -0.7
TVP23C-210ENST00000584811 UNQ6190/PRO20217Q6UXQ8 127 aa10.68□□□□□ -0.7
TVP23C-210ENST00000584811 ENHOQ6UWT2 76 aa10.68□□□□□ -0.7
TVP23C-210ENST00000584811 LELP1Q5T871 98 aa10.68□□□□□ -0.7
TVP23C-210ENST00000584811 LYPD5Q6UWN5 251 aa10.68□□□□□ -0.7
TVP23C-210ENST00000584811 WFDC10BQ8IUB3 73 aa10.68□□□□□ -0.7
TVP23C-210ENST00000584811 SLPIP03973 132 aa10.67□□□□□ -0.7
TVP23C-210ENST00000584811 MGAM2Q2M2H8 2515 aa10.67□□□□□ -0.7
TVP23C-210ENST00000584811 CFAP161Q6P656 301 aa10.67□□□□□ -0.7
TVP23C-210ENST00000584811 TTC32Q5I0X7 151 aa10.66□□□□□ -0.7
TVP23C-210ENST00000584811 CYSRT1A8MQ03 144 aa10.65□□□□□ -0.7
TVP23C-210ENST00000584811 BAHCC1Q9P281 2608 aa10.65□□□□□ -0.7
TVP23C-210ENST00000584811 DNAH3Q8TD57 4116 aa10.65□□□□□ -0.7
TVP23C-210ENST00000584811 C3orf56Q8N813 242 aa10.65□□□□□ -0.71
TVP23C-210ENST00000584811 KPRPQ5T749 579 aaPredicted RBP10.64□□□□□ -0.71
TVP23C-210ENST00000584811 LECT2O14960 151 aa10.64□□□□□ -0.71
TVP23C-210ENST00000584811 TRACP01848 142 aa10.64□□□□□ -0.71
TVP23C-210ENST00000584811 NANOS2P60321 138 aaKnown RBP10.64□□□□□ -0.71
TVP23C-210ENST00000584811 NCR3O14931 201 aa10.63□□□□□ -0.71
TVP23C-210ENST00000584811 SPAG11BQ08648 103 aa10.63□□□□□ -0.71
TVP23C-210ENST00000584811 C15orf53Q8NAA6 179 aa10.63□□□□□ -0.71
TVP23C-210ENST00000584811 PPDPFQ9H3Y8 114 aa10.63□□□□□ -0.71
TVP23C-210ENST00000584811 A0A0J9YWU9 116 aa10.62□□□□□ -0.71
TVP23C-210ENST00000584811 LYSTQ99698 3801 aa10.62□□□□□ -0.71
TVP23C-210ENST00000584811 PRR34Q9NV39 138 aa10.62□□□□□ -0.71
TVP23C-210ENST00000584811 B5MCH6 92 aa10.61□□□□□ -0.71
TVP23C-210ENST00000584811 HIGD2BQ4VC39 106 aa10.6□□□□□ -0.71
TVP23C-210ENST00000584811 DEFB121Q5J5C9 76 aa10.6□□□□□ -0.71
TVP23C-210ENST00000584811 ANAPC13Q9BS18 74 aa10.59□□□□□ -0.71
TVP23C-210ENST00000584811 ESRGQ1W209 222 aa10.59□□□□□ -0.71
TVP23C-210ENST00000584811 SNCGO76070 127 aa10.58□□□□□ -0.72
TVP23C-210ENST00000584811 LINC01561Q8N1V8 128 aa10.58□□□□□ -0.72
TVP23C-210ENST00000584811 XAGE1AQ9HD64 81 aa10.58□□□□□ -0.72
TVP23C-210ENST00000584811 DNAL4O96015 105 aa10.58□□□□□ -0.72
TVP23C-210ENST00000584811 SMCR5Q8TEV8 140 aa10.58□□□□□ -0.72
TVP23C-210ENST00000584811 EGFEM1PQ0D2K5 195 aa10.57□□□□□ -0.72
TVP23C-210ENST00000584811 KLK5Q9Y337 293 aaPredicted RBP10.56□□□□□ -0.72
TVP23C-210ENST00000584811 C14orf132Q9NPU4 83 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms