RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.34□□□□□ -1.07
CDK5RAP3-231ENST00000584063 NBEAL2Q6ZNJ1 2754 aa8.34□□□□□ -1.07
CDK5RAP3-231ENST00000584063 A0A0J9YXY3 114 aa8.33□□□□□ -1.08
CDK5RAP3-231ENST00000584063 I3L3M4 83 aa8.33□□□□□ -1.08
CDK5RAP3-231ENST00000584063 M0R378 163 aa8.33□□□□□ -1.08
CDK5RAP3-231ENST00000584063 LINC01006Q8NI28 216 aa8.33□□□□□ -1.08
CDK5RAP3-231ENST00000584063 CLEC2BQ92478 149 aa8.33□□□□□ -1.08
CDK5RAP3-231ENST00000584063 NDUFC2-KCTD14E9PQ53 114 aa8.33□□□□□ -1.08
CDK5RAP3-231ENST00000584063 TMEM263Q8WUH6 116 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-231ENST00000584063 DYNLRB2Q8TF09 96 aa8.33□□□□□ -1.08
CDK5RAP3-231ENST00000584063 TIMM21Q9BVV7 248 aa8.33□□□□□ -1.08
CDK5RAP3-231ENST00000584063 LEPROTO15243 131 aa8.32□□□□□ -1.08
CDK5RAP3-231ENST00000584063 UPK3BQ9BT76 320 aa8.32□□□□□ -1.08
CDK5RAP3-231ENST00000584063 MAST4O15021 2626 aa8.32□□□□□ -1.08
CDK5RAP3-231ENST00000584063 TRRAPQ9Y4A5 3859 aa8.32□□□□□ -1.08
CDK5RAP3-231ENST00000584063 TRIAP1O43715 76 aa8.32□□□□□ -1.08
CDK5RAP3-231ENST00000584063 FAM104AQ969W3 186 aa8.32□□□□□ -1.08
CDK5RAP3-231ENST00000584063 A8MUN3 132 aa8.31□□□□□ -1.08
CDK5RAP3-231ENST00000584063 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
CDK5RAP3-231ENST00000584063 Q8N2B8 174 aa8.31□□□□□ -1.08
CDK5RAP3-231ENST00000584063 TMEM61Q8N0U2 210 aa8.31□□□□□ -1.08
CDK5RAP3-231ENST00000584063 ZNF73O43830 326 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-231ENST00000584063 SBSPONQ8IVN8 264 aa8.3□□□□□ -1.08
CDK5RAP3-231ENST00000584063 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
CDK5RAP3-231ENST00000584063 IGHV1-58A0A0C4DH39 117 aa8.3□□□□□ -1.08
CDK5RAP3-231ENST00000584063 TRBV6-5A0A0K0K1A5 114 aa8.3□□□□□ -1.08
CDK5RAP3-231ENST00000584063 TMEM256-PLSCR3K7ERE1 68 aa8.3□□□□□ -1.08
CDK5RAP3-231ENST00000584063 ATOX1O00244 68 aa8.3□□□□□ -1.08
CDK5RAP3-231ENST00000584063 C4orf3Q8WVX3 66 aa8.3□□□□□ -1.08
CDK5RAP3-231ENST00000584063 STAB1Q9NY15 2570 aa8.3□□□□□ -1.08
CDK5RAP3-231ENST00000584063 LINC00467Q9BRT7 94 aa8.29□□□□□ -1.08
CDK5RAP3-231ENST00000584063 RNASE1P07998 156 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-231ENST00000584063 XCL2Q9UBD3 114 aa8.28□□□□□ -1.08
CDK5RAP3-231ENST00000584063 CDKN2A-AS1Q9UH64 79 aa8.28□□□□□ -1.08
CDK5RAP3-231ENST00000584063 CXCL5P42830 114 aa8.27□□□□□ -1.08
CDK5RAP3-231ENST00000584063 RHOHQ15669 191 aa8.27□□□□□ -1.08
CDK5RAP3-231ENST00000584063 CYSRT1A8MQ03 144 aa8.27□□□□□ -1.09
CDK5RAP3-231ENST00000584063 GYPEP15421 78 aa8.27□□□□□ -1.09
CDK5RAP3-231ENST00000584063 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
CDK5RAP3-231ENST00000584063 LITAFQ99732 161 aa8.27□□□□□ -1.09
CDK5RAP3-231ENST00000584063 COX6A2Q02221 97 aa8.26□□□□□ -1.09
CDK5RAP3-231ENST00000584063 COL6A5A8TX70 2615 aa8.26□□□□□ -1.09
CDK5RAP3-231ENST00000584063 H3BMM0 161 aa8.26□□□□□ -1.09
CDK5RAP3-231ENST00000584063 C2orf82Q6UX34 121 aa8.26□□□□□ -1.09
CDK5RAP3-231ENST00000584063 TMEM243Q9BU79 118 aa8.26□□□□□ -1.09
CDK5RAP3-231ENST00000584063 LST1O00453 97 aa8.25□□□□□ -1.09
CDK5RAP3-231ENST00000584063 FHL2Q14192 279 aa8.25□□□□□ -1.09
CDK5RAP3-231ENST00000584063 MPLKIPQ8TAP9 179 aa8.25□□□□□ -1.09
CDK5RAP3-231ENST00000584063 CHCHD7Q9BUK0 85 aa8.25□□□□□ -1.09
CDK5RAP3-231ENST00000584063 ICOSQ9Y6W8 199 aa8.25□□□□□ -1.09
CDK5RAP3-231ENST00000584063 ATXN8Q156A1 80 aa8.24□□□□□ -1.09
CDK5RAP3-231ENST00000584063 SERP2Q8N6R1 65 aa8.24□□□□□ -1.09
CDK5RAP3-231ENST00000584063 MAP6D1Q9H9H5 199 aa8.24□□□□□ -1.09
CDK5RAP3-231ENST00000584063 NDUFS5O43920 106 aa8.24□□□□□ -1.09
CDK5RAP3-231ENST00000584063 PLA2G2DQ9UNK4 145 aa8.24□□□□□ -1.09
CDK5RAP3-231ENST00000584063 DEFB114Q30KQ6 69 aa8.23□□□□□ -1.09
CDK5RAP3-231ENST00000584063 VSIG2Q96IQ7 327 aa8.23□□□□□ -1.09
CDK5RAP3-231ENST00000584063 UBE2D4Q9Y2X8 147 aa8.23□□□□□ -1.09
CDK5RAP3-231ENST00000584063 A0A0B4J2C4 111 aa8.23□□□□□ -1.09
CDK5RAP3-231ENST00000584063 H7C423 109 aa8.23□□□□□ -1.09
CDK5RAP3-231ENST00000584063 MRPS36P82909 103 aaKnown RBP8.23□□□□□ -1.09
CDK5RAP3-231ENST00000584063 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.22□□□□□ -1.09
CDK5RAP3-231ENST00000584063 WFDC10AQ9H1F0 79 aa8.22□□□□□ -1.09
CDK5RAP3-231ENST00000584063 TRGV1A0A0A0MS02 117 aa8.22□□□□□ -1.09
CDK5RAP3-231ENST00000584063 LINC00337Q8N6G1 96 aa8.21□□□□□ -1.1
CDK5RAP3-231ENST00000584063 UBE2WQ96B02 151 aa8.21□□□□□ -1.1
CDK5RAP3-231ENST00000584063 MIAQ16674 131 aa8.2□□□□□ -1.1
CDK5RAP3-231ENST00000584063 REG3AQ06141 175 aa8.2□□□□□ -1.1
CDK5RAP3-231ENST00000584063 ODF3L2Q3SX64 289 aa8.2□□□□□ -1.1
CDK5RAP3-231ENST00000584063 TRBV10-2A0A0K0K1G8 114 aa8.19□□□□□ -1.1
CDK5RAP3-231ENST00000584063 UBE2L6O14933 153 aa8.19□□□□□ -1.1
CDK5RAP3-231ENST00000584063 LINC00313P59037 77 aa8.19□□□□□ -1.1
CDK5RAP3-231ENST00000584063 KRTAP10-3P60369 221 aa8.19□□□□□ -1.1
CDK5RAP3-231ENST00000584063 PIK3CD-AS1Q5SR53 167 aa8.19□□□□□ -1.1
CDK5RAP3-231ENST00000584063 C11orf72Q8NBR9 251 aa8.19□□□□□ -1.1
CDK5RAP3-231ENST00000584063 C19orf73Q9NVV2 129 aa8.19□□□□□ -1.1
CDK5RAP3-231ENST00000584063 NOTCH1P46531 2555 aa8.18□□□□□ -1.1
CDK5RAP3-231ENST00000584063 CCKP06307 115 aa8.18□□□□□ -1.1
CDK5RAP3-231ENST00000584063 Q6ZTI0 123 aa8.18□□□□□ -1.1
CDK5RAP3-231ENST00000584063 COPS9Q8WXC6 57 aa8.18□□□□□ -1.1
CDK5RAP3-231ENST00000584063 PKD1L1Q8TDX9 2849 aa8.18□□□□□ -1.1
CDK5RAP3-231ENST00000584063 TRBV30A0A0K0K1B3 111 aa8.18□□□□□ -1.1
CDK5RAP3-231ENST00000584063 LOC100131303A0A0U1RQF7 123 aa8.18□□□□□ -1.1
CDK5RAP3-231ENST00000584063 LINC00588Q9Y4M8 146 aa8.18□□□□□ -1.1
CDK5RAP3-231ENST00000584063 FBN1P35555 2871 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-231ENST00000584063 COX6CP09669 75 aa8.17□□□□□ -1.1
CDK5RAP3-231ENST00000584063 SOSTDC1Q6X4U4 206 aa8.17□□□□□ -1.1
CDK5RAP3-231ENST00000584063 TOMM7Q9P0U1 55 aa8.17□□□□□ -1.1
CDK5RAP3-231ENST00000584063 HIST1H4AP62805 103 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-231ENST00000584063 ZNF706Q9Y5V0 76 aaPredicted RBP8.17□□□□□ -1.1
CDK5RAP3-231ENST00000584063 LINC00242Q5T6M2 205 aa8.16□□□□□ -1.1
CDK5RAP3-231ENST00000584063 Q9HAA7 133 aa8.16□□□□□ -1.1
CDK5RAP3-231ENST00000584063 COX7A2LO14548 114 aa8.15□□□□□ -1.1
CDK5RAP3-231ENST00000584063 LYPD5Q6UWN5 251 aa8.15□□□□□ -1.1
CDK5RAP3-231ENST00000584063 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.1
CDK5RAP3-231ENST00000584063 C5orf38Q86SI9 138 aa8.15□□□□□ -1.11
CDK5RAP3-231ENST00000584063 LINC00308Q8TCZ7 52 aa8.15□□□□□ -1.11
CDK5RAP3-231ENST00000584063 NOP10Q9NPE3 64 aaKnown RBP8.15□□□□□ -1.11
CDK5RAP3-231ENST00000584063 A8MTW9 85 aa8.14□□□□□ -1.11
CDK5RAP3-231ENST00000584063 INSP01308 110 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms