RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	INSL4	Q14641	139 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569		Q56UQ5	140 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569	SCN3B	Q9NY72	215 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569	GNG8	Q9UK08	70 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569		V9GYV3	84 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569	ABCA1	O95477	2261 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569	LAMC1	P11047	1609 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569	LPA	P08519	4548 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	MYH7	P12883	1935 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	FOCAD	Q5VW36	1801 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	TRBV7-1	A0A0A6YYK4	115 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	PIGBOS1	A0A0B4J2F0	54 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	TRBV10-3	A0A0K0K1G6	114 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569		F2Z2F3	143 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	S100A1	P23297	94 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	RPL37	P61927	97 aa	Known RBP	0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	CATR1	Q13166	79 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569		Q6AWC8	147 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	PP6455	Q8WZ26	134 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	CGREF1	Q99674	301 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	C2orf88	Q9BSF0	95 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	LINC00312	Q9Y6C7	94 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	TNXB	P22105	4242 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	TOPAZ1	Q8N9V7	1692 aa		0.74	□□□□□ -2.29
NUP85-222	ENST00000583569	AKAP6	Q13023	2319 aa		0.73	□□□□□ -2.29
NUP85-222	ENST00000583569	LOC285556	D6RIA3	1793 aa		0.73	□□□□□ -2.29
NUP85-222	ENST00000583569		A0A087WTM6	91 aa		0.73	□□□□□ -2.29
NUP85-222	ENST00000583569		A0A0D9SG42	100 aa		0.73	□□□□□ -2.29
NUP85-222	ENST00000583569	HCG22	E2RYF7	251 aa		0.73	□□□□□ -2.29
NUP85-222	ENST00000583569		F6UZH7	168 aa		0.73	□□□□□ -2.29
NUP85-222	ENST00000583569	APOC4-APOC2	K7ER74	178 aa		0.73	□□□□□ -2.29
NUP85-222	ENST00000583569	APOC2	P02655	101 aa		0.73	□□□□□ -2.29
NUP85-222	ENST00000583569	EDDM3B	P56851	147 aa		0.73	□□□□□ -2.29
NUP85-222	ENST00000583569		Q8N8P6	123 aa		0.73	□□□□□ -2.29
NUP85-222	ENST00000583569	MYH9	P35579	1960 aa	Known RBP	0.73	□□□□□ -2.29
NUP85-222	ENST00000583569	LTN1	O94822	1766 aa		0.73	□□□□□ -2.29
NUP85-222	ENST00000583569	VPS13D	Q5THJ4	4388 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	KIF14	Q15058	1648 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	SAMD9	Q5K651	1589 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	TRAV13-2	A0A0B4J235	113 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	BTG2	P78543	158 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	CCL8	P80075	99 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	C12orf73	Q69YU5	71 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	MRPL54	Q6P161	138 aa	Known RBP	0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	AQP10	Q96PS8	301 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	PRDM15	P57071	1507 aa	Predicted RBP	0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	MUC17	Q685J3	4493 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	IFT140	Q96RY7	1462 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	ITSN1	Q15811	1721 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	DNAH17	Q9UFH2	4485 aa		0.72	□□□□□ -2.29
NUP85-222	ENST00000583569	RGPD3	A6NKT7	1758 aa	Predicted RBP	0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	RGPD4	Q7Z3J3	1758 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	TRGV1	A0A0A0MS02	117 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	IFNG	P01579	166 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	ACYP2	P14621	99 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	TPPP2	P59282	170 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	C10orf128	Q5T292	105 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	C9orf153	Q5TBE3	101 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	ZNF818P	Q6ZRF7	136 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	TMEM203	Q969S6	136 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	PPP3R2	Q96LZ3	170 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569		Q96NJ1	140 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	NALCN	Q8IZF0	1738 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	SYNE1	Q8NF91	8797 aa	Known RBP	0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	PLCE1	Q9P212	2302 aa		0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	URB1	O60287	2271 aa	Known RBP	0.71	□□□□□ -2.3
NUP85-222	ENST00000583569	DNAH2	Q9P225	4427 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	NEXMIF	Q5QGS0	1516 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	NRXN2	Q9P2S2	1712 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	NHS	Q6T4R5	1651 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569		A0A096LNT2	108 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	LCE6A	A0A183	80 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	CLPSL1	A2RUU4	121 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	OOSP1	A8MZH6	123 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	CORT	O00230	105 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	KRTAP19-3	Q7Z4W3	81 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	TTC9C	Q8N5M4	171 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	SPAG17	Q6Q759	2223 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	MYO3A	Q8NEV4	1616 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	CASKIN1	Q8WXD9	1431 aa		0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	KTN1	Q86UP2	1357 aa	Known RBP	0.7	□□□□□ -2.3
NUP85-222	ENST00000583569	MAP2	P11137	1827 aa	Known RBP	0.69	□□□□□ -2.3
NUP85-222	ENST00000583569	ATP10B	O94823	1461 aa		0.69	□□□□□ -2.3
NUP85-222	ENST00000583569	SIX6	O95475	246 aa		0.69	□□□□□ -2.3
NUP85-222	ENST00000583569	PPP1R17	O96001	155 aa		0.69	□□□□□ -2.3
NUP85-222	ENST00000583569	SMIM6	P0DI80	62 aa		0.69	□□□□□ -2.3
NUP85-222	ENST00000583569	S100P	P25815	95 aa		0.69	□□□□□ -2.3
NUP85-222	ENST00000583569	PPP3R1	P63098	170 aa		0.69	□□□□□ -2.3
NUP85-222	ENST00000583569	WHAMMP3	Q1A5X7	153 aa		0.69	□□□□□ -2.3
NUP85-222	ENST00000583569	LAMB1	P07942	1786 aa		0.69	□□□□□ -2.3
NUP85-222	ENST00000583569	URB2	Q14146	1524 aa	Known RBP	0.69	□□□□□ -2.3
NUP85-222	ENST00000583569	MAGI3	Q5TCQ9	1506 aa		0.69	□□□□□ -2.3
NUP85-222	ENST00000583569	PHIP	Q8WWQ0	1821 aa		0.68	□□□□□ -2.3
NUP85-222	ENST00000583569	ESPL1	Q14674	2120 aa		0.68	□□□□□ -2.3
NUP85-222	ENST00000583569	PLEKHH2	Q8IVE3	1493 aa		0.68	□□□□□ -2.3
NUP85-222	ENST00000583569	GVQW2	A0A096LPI5	108 aa	Predicted RBP	0.68	□□□□□ -2.3
NUP85-222	ENST00000583569	ATP6V1G2-DDX39B	F2Z307	99 aa		0.68	□□□□□ -2.3
NUP85-222	ENST00000583569	MT4	P47944	62 aa		0.68	□□□□□ -2.3
NUP85-222	ENST00000583569	GNG4	P50150	75 aa		0.68	□□□□□ -2.3
NUP85-222	ENST00000583569	MRPS10	P82664	201 aa	Known RBP	0.68	□□□□□ -2.3

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