RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PRSS2P07478 247 aa8.43□□□□□ -1.06
SRSF1-204ENST00000581979 GCSHP23434 173 aa8.43□□□□□ -1.06
SRSF1-204ENST00000581979 SRSF9Q13242 221 aaKnown RBP eCLIP8.43□□□□□ -1.061e-9■□□□□ 11.3
SRSF1-204ENST00000581979 DNAH17Q9UFH2 4485 aa8.42□□□□□ -1.06
SRSF1-204ENST00000581979 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
SRSF1-204ENST00000581979 PKHD1P08F94 4074 aa8.42□□□□□ -1.06
SRSF1-204ENST00000581979 HERC2O95714 4834 aa8.41□□□□□ -1.06
SRSF1-204ENST00000581979 APOMO95445 188 aa8.41□□□□□ -1.06
SRSF1-204ENST00000581979 CEND1Q8N111 149 aa8.41□□□□□ -1.06
SRSF1-204ENST00000581979 ORAOV1Q8WV07 137 aa8.41□□□□□ -1.06
SRSF1-204ENST00000581979 C1orf43Q9BWL3 253 aa8.41□□□□□ -1.06
SRSF1-204ENST00000581979 KRTAP3-3Q9BYR6 98 aa8.41□□□□□ -1.06
SRSF1-204ENST00000581979 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
SRSF1-204ENST00000581979 SPANXB1Q9NS25 103 aaPredicted RBP8.41□□□□□ -1.06
SRSF1-204ENST00000581979 IGKV2D-24A0A075B6R9 120 aa8.4□□□□□ -1.06
SRSF1-204ENST00000581979 HERV-K104P63124 156 aa8.4□□□□□ -1.06
SRSF1-204ENST00000581979 LBHQ53QV2 105 aaPredicted RBP8.4□□□□□ -1.06
SRSF1-204ENST00000581979 C6orf226Q5I0X4 101 aa8.4□□□□□ -1.06
SRSF1-204ENST00000581979 Q8IZM0 81 aa8.4□□□□□ -1.06
SRSF1-204ENST00000581979 ZNF625Q96I27 306 aaPredicted RBP8.4□□□□□ -1.06
SRSF1-204ENST00000581979 Q9HAA7 133 aa8.4□□□□□ -1.06
SRSF1-204ENST00000581979 IBA57-AS1B1ANH7 110 aa8.4□□□□□ -1.07
SRSF1-204ENST00000581979 PTTG1IPP53801 180 aa8.4□□□□□ -1.07
SRSF1-204ENST00000581979 MEIG1Q5JSS6 88 aa8.4□□□□□ -1.07
SRSF1-204ENST00000581979 CFAP161Q6P656 301 aa8.4□□□□□ -1.07
SRSF1-204ENST00000581979 KIAA1109Q2LD37 5005 aa8.4□□□□□ -1.07
SRSF1-204ENST00000581979 CIRBPQ14011 172 aaKnown RBP8.39□□□□□ -1.07
SRSF1-204ENST00000581979 COL5A1-AS1Q5SY13 56 aa8.39□□□□□ -1.07
SRSF1-204ENST00000581979 C1orf134Q5TEV5 83 aa8.38□□□□□ -1.07
SRSF1-204ENST00000581979 KRTAP26-1Q6PEX3 210 aa8.38□□□□□ -1.07
SRSF1-204ENST00000581979 SFTA2Q6UW10 78 aa8.38□□□□□ -1.07
SRSF1-204ENST00000581979 TM2D2Q9BX73 214 aa8.38□□□□□ -1.07
SRSF1-204ENST00000581979 PKD1P98161 4303 aa8.38□□□□□ -1.07
SRSF1-204ENST00000581979 A6NDN8 102 aa8.37□□□□□ -1.07
SRSF1-204ENST00000581979 TIMM17BO60830 172 aa8.37□□□□□ -1.07
SRSF1-204ENST00000581979 FXYD2P54710 66 aa8.37□□□□□ -1.07
SRSF1-204ENST00000581979 CKS1BP61024 79 aa8.37□□□□□ -1.07
SRSF1-204ENST00000581979 SPAG11BQ08648 103 aa8.37□□□□□ -1.07
SRSF1-204ENST00000581979 LITAFQ99732 161 aa8.37□□□□□ -1.07
SRSF1-204ENST00000581979 K7EP13 123 aa8.37□□□□□ -1.07
SRSF1-204ENST00000581979 CXCL5P42830 114 aa8.37□□□□□ -1.07
SRSF1-204ENST00000581979 RMI2Q96E14 147 aa8.37□□□□□ -1.07
SRSF1-204ENST00000581979 SPANXDQ9BXN6 97 aa8.37□□□□□ -1.07
SRSF1-204ENST00000581979 SPANXCQ9NY87 97 aa8.37□□□□□ -1.07
SRSF1-204ENST00000581979 A0A0U1RRA0 63 aa8.36□□□□□ -1.07
SRSF1-204ENST00000581979 NBDYA0A0U1RRE5 68 aa8.36□□□□□ -1.07
SRSF1-204ENST00000581979 KIAA0087Q14695 138 aa8.36□□□□□ -1.07
SRSF1-204ENST00000581979 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
SRSF1-204ENST00000581979 C2orf82Q6UX34 121 aa8.35□□□□□ -1.07
SRSF1-204ENST00000581979 MUSTN1Q8IVN3 82 aa8.35□□□□□ -1.07
SRSF1-204ENST00000581979 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
SRSF1-204ENST00000581979 A6NJY4 79 aa8.34□□□□□ -1.07
SRSF1-204ENST00000581979 SMIM13P0DJ93 91 aa8.34□□□□□ -1.07
SRSF1-204ENST00000581979 Q6ZVH6 145 aa8.34□□□□□ -1.07
SRSF1-204ENST00000581979 KRTAP17-1Q9BYP8 105 aa8.34□□□□□ -1.07
SRSF1-204ENST00000581979 NHP2Q9NX24 153 aaKnown RBP8.34□□□□□ -1.07
SRSF1-204ENST00000581979 NPC2P61916 151 aa8.34□□□□□ -1.07
SRSF1-204ENST00000581979 DAND5Q8N907 189 aa8.34□□□□□ -1.07
SRSF1-204ENST00000581979 DNAH11Q96DT5 4516 aa8.33□□□□□ -1.08
SRSF1-204ENST00000581979 LINC00158P58513 81 aa8.33□□□□□ -1.08
SRSF1-204ENST00000581979 RPL24P83731 157 aaKnown RBP8.33□□□□□ -1.08
SRSF1-204ENST00000581979 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
SRSF1-204ENST00000581979 ZNF561-AS1K7EIQ3 104 aa8.32□□□□□ -1.08
SRSF1-204ENST00000581979 IFITM1P13164 125 aa8.32□□□□□ -1.08
SRSF1-204ENST00000581979 PFN2P35080 140 aa8.32□□□□□ -1.08
SRSF1-204ENST00000581979 HIGD2BQ4VC39 106 aa8.32□□□□□ -1.08
SRSF1-204ENST00000581979 C6orf223Q8N319 242 aa8.32□□□□□ -1.08
SRSF1-204ENST00000581979 LINC00526Q96FQ7 95 aa8.32□□□□□ -1.08
SRSF1-204ENST00000581979 ERG28Q9UKR5 140 aa8.32□□□□□ -1.08
SRSF1-204ENST00000581979 C15orf56Q8N910 161 aa8.32□□□□□ -1.08
SRSF1-204ENST00000581979 COPS9Q8WXC6 57 aa8.32□□□□□ -1.08
SRSF1-204ENST00000581979 KRTAP1-5Q9BYS1 174 aa8.32□□□□□ -1.08
SRSF1-204ENST00000581979 COX11Q9Y6N1 276 aa8.32□□□□□ -1.08
SRSF1-204ENST00000581979 K7ERJ3 54 aa8.31□□□□□ -1.08
SRSF1-204ENST00000581979 TTC32Q5I0X7 151 aa8.31□□□□□ -1.08
SRSF1-204ENST00000581979 NTN5Q8WTR8 489 aaPredicted RBP8.31□□□□□ -1.08
SRSF1-204ENST00000581979 RAB37Q96AX2 223 aa8.31□□□□□ -1.08
SRSF1-204ENST00000581979 PCLOQ9Y6V0 5065 aa8.31□□□□□ -1.08
SRSF1-204ENST00000581979 A4D1N5 150 aa8.3□□□□□ -1.08
SRSF1-204ENST00000581979 TAX1BP3O14907 124 aa8.3□□□□□ -1.08
SRSF1-204ENST00000581979 TNP2Q05952 138 aa8.3□□□□□ -1.08
SRSF1-204ENST00000581979 UNQ6190/PRO20217Q6UXQ8 127 aa8.3□□□□□ -1.08
SRSF1-204ENST00000581979 MIR7-3HGQ8N6C7 128 aa8.3□□□□□ -1.08
SRSF1-204ENST00000581979 LINC00308Q8TCZ7 52 aa8.3□□□□□ -1.08
SRSF1-204ENST00000581979 A0A1B0GV90 55 aa8.29□□□□□ -1.08
SRSF1-204ENST00000581979 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
SRSF1-204ENST00000581979 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.29□□□□□ -1.08
SRSF1-204ENST00000581979 C10orf25Q5T742 122 aa8.29□□□□□ -1.08
SRSF1-204ENST00000581979 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
SRSF1-204ENST00000581979 A0A1B0GWB2 263 aa8.28□□□□□ -1.08
SRSF1-204ENST00000581979 COX17Q14061 63 aa8.28□□□□□ -1.08
SRSF1-204ENST00000581979 C2orf48Q96LS8 159 aa8.28□□□□□ -1.08
SRSF1-204ENST00000581979 USP17L23D6RBM5 183 aa8.27□□□□□ -1.09
SRSF1-204ENST00000581979 PSCAO43653 123 aa8.27□□□□□ -1.09
SRSF1-204ENST00000581979 CFC1BP0CG36 223 aa8.27□□□□□ -1.09
SRSF1-204ENST00000581979 CFC1P0CG37 223 aa8.27□□□□□ -1.09
SRSF1-204ENST00000581979 C9orf116Q5BN46 136 aaPredicted RBP8.27□□□□□ -1.09
SRSF1-204ENST00000581979 SOSTDC1Q6X4U4 206 aa8.27□□□□□ -1.09
SRSF1-204ENST00000581979 EIF4EBP3O60516 100 aaPredicted RBP8.26□□□□□ -1.09
SRSF1-204ENST00000581979 F8WDY8 70 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms