RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 KRTAP4-1Q9BYQ7 146 aa10.93□□□□□ -0.66
NDEL1-209ENST00000580738 F8VRH5 84 aa10.92□□□□□ -0.66
NDEL1-209ENST00000580738 MRPL54Q6P161 138 aaKnown RBP10.92□□□□□ -0.66
NDEL1-209ENST00000580738 C2orf88Q9BSF0 95 aa10.92□□□□□ -0.66
NDEL1-209ENST00000580738 RPL23P62829 140 aaKnown RBP10.91□□□□□ -0.66
NDEL1-209ENST00000580738 F8W036 122 aa10.9□□□□□ -0.66
NDEL1-209ENST00000580738 PPBPP02775 128 aa10.9□□□□□ -0.66
NDEL1-209ENST00000580738 CTAG1AP78358 180 aa10.9□□□□□ -0.66
NDEL1-209ENST00000580738 TCTE3Q8IZS6 198 aa10.9□□□□□ -0.66
NDEL1-209ENST00000580738 AMELXQ99217 191 aa10.9□□□□□ -0.66
NDEL1-209ENST00000580738 PNRC1Q12796 327 aaPredicted RBP10.89□□□□□ -0.67
NDEL1-209ENST00000580738 VCX2Q9H322 139 aa10.89□□□□□ -0.67
NDEL1-209ENST00000580738 CDKN2A-AS1Q9UH64 79 aa10.89□□□□□ -0.67
NDEL1-209ENST00000580738 A0A1B0GXF2 115 aa10.88□□□□□ -0.67
NDEL1-209ENST00000580738 ADIRFQ15847 76 aa10.88□□□□□ -0.67
NDEL1-209ENST00000580738 ASB16-AS1Q495Z4 193 aa10.88□□□□□ -0.67
NDEL1-209ENST00000580738 C2orf66Q6UXQ4 117 aa10.88□□□□□ -0.67
NDEL1-209ENST00000580738 ORMDL3Q8N138 153 aa10.88□□□□□ -0.67
NDEL1-209ENST00000580738 PRLHP81277 87 aa10.87□□□□□ -0.67
NDEL1-209ENST00000580738 SRSF3P84103 164 aaKnown RBP10.87□□□□□ -0.67
NDEL1-209ENST00000580738 TMEM136Q6ZRR5 245 aa10.87□□□□□ -0.67
NDEL1-209ENST00000580738 FAM19A3Q7Z5A8 133 aa10.87□□□□□ -0.67
NDEL1-209ENST00000580738 C3orf22Q8N5N4 141 aa10.87□□□□□ -0.67
NDEL1-209ENST00000580738 PRELID3AQ96N28 172 aa10.87□□□□□ -0.67
NDEL1-209ENST00000580738 IGKV2-28A0A075B6P5 120 aa10.86□□□□□ -0.67
NDEL1-209ENST00000580738 LOC389332A0A1B0GUA5 103 aa10.86□□□□□ -0.67
NDEL1-209ENST00000580738 SCO1O75880 301 aa10.86□□□□□ -0.67
NDEL1-209ENST00000580738 IGKV2D-28P01615 120 aa10.86□□□□□ -0.67
NDEL1-209ENST00000580738 S100A8P05109 93 aa10.86□□□□□ -0.67
NDEL1-209ENST00000580738 LINC00337Q8N6G1 96 aa10.86□□□□□ -0.67
NDEL1-209ENST00000580738 IGLV5-37A0A075B6J1 123 aa10.85□□□□□ -0.67
NDEL1-209ENST00000580738 KRTAP13-3Q3SY46 172 aa10.85□□□□□ -0.67
NDEL1-209ENST00000580738 CYSLTR1Q9Y271 337 aa10.85□□□□□ -0.67
NDEL1-209ENST00000580738 NKAPP1Q8N9T2 125 aa10.84□□□□□ -0.67
NDEL1-209ENST00000580738 HERVK_113P63121 156 aa10.83□□□□□ -0.68
NDEL1-209ENST00000580738 IGIPA6NJ69 53 aa10.82□□□□□ -0.68
NDEL1-209ENST00000580738 PRSS47A8MTI9 375 aa10.82□□□□□ -0.68
NDEL1-209ENST00000580738 CXCL5P42830 114 aa10.82□□□□□ -0.68
NDEL1-209ENST00000580738 RAB5BP61020 215 aa10.82□□□□□ -0.68
NDEL1-209ENST00000580738 FP248Q71RG6 208 aaPredicted RBP10.82□□□□□ -0.68
NDEL1-209ENST00000580738 PLEKHB2Q96CS7 222 aa10.81□□□□□ -0.68
NDEL1-209ENST00000580738 NAT8Q9UHE5 227 aa10.81□□□□□ -0.68
NDEL1-209ENST00000580738 C9JQL5 133 aa10.8□□□□□ -0.68
NDEL1-209ENST00000580738 FAM19A1Q7Z5A9 133 aa10.8□□□□□ -0.68
NDEL1-209ENST00000580738 GEMIN7Q9H840 131 aaKnown RBP10.8□□□□□ -0.68
NDEL1-209ENST00000580738 SMIM1B2RUZ4 78 aa10.79□□□□□ -0.68
NDEL1-209ENST00000580738 TMEM238C9JI98 176 aa10.79□□□□□ -0.68
NDEL1-209ENST00000580738 NPSP0C0P6 89 aa10.79□□□□□ -0.68
NDEL1-209ENST00000580738 SEC11AP67812 179 aa10.79□□□□□ -0.68
NDEL1-209ENST00000580738 SPAG11AQ6PDA7 123 aa10.79□□□□□ -0.68
NDEL1-209ENST00000580738 MAP1LC3AQ9H492 121 aa10.79□□□□□ -0.68
NDEL1-209ENST00000580738 Q8N8P6 123 aa10.78□□□□□ -0.68
NDEL1-209ENST00000580738 COX7B2Q8TF08 81 aa10.78□□□□□ -0.68
NDEL1-209ENST00000580738 TMEM126AQ9H061 195 aa10.78□□□□□ -0.68
NDEL1-209ENST00000580738 SEC61BP60468 96 aaKnown RBP10.76□□□□□ -0.69
NDEL1-209ENST00000580738 LCE2CQ5TA81 110 aa10.76□□□□□ -0.69
NDEL1-209ENST00000580738 ORMDL2Q53FV1 153 aa10.75□□□□□ -0.69
NDEL1-209ENST00000580738 LAMTOR2Q9Y2Q5 125 aa10.75□□□□□ -0.69
NDEL1-209ENST00000580738 M0R378 163 aa10.74□□□□□ -0.69
NDEL1-209ENST00000580738 PDZD11Q5EBL8 140 aa10.74□□□□□ -0.69
NDEL1-209ENST00000580738 ATP5L2Q7Z4Y8 100 aa10.73□□□□□ -0.69
NDEL1-209ENST00000580738 CBLN2Q8IUK8 224 aa10.73□□□□□ -0.69
NDEL1-209ENST00000580738 C4orf48Q5BLP8 95 aa10.72□□□□□ -0.69
NDEL1-209ENST00000580738 PAPPA-AS1Q5QFB9 102 aa10.72□□□□□ -0.69
NDEL1-209ENST00000580738 DAND5Q8N907 189 aa10.72□□□□□ -0.69
NDEL1-209ENST00000580738 VPREB1P12018 145 aa10.71□□□□□ -0.69
NDEL1-209ENST00000580738 HIGD2AQ9BW72 106 aa10.71□□□□□ -0.69
NDEL1-209ENST00000580738 SPINK8P0C7L1 97 aa10.7□□□□□ -0.7
NDEL1-209ENST00000580738 SPRR4Q96PI1 79 aa10.7□□□□□ -0.7
NDEL1-209ENST00000580738 TIMM17AQ99595 171 aa10.7□□□□□ -0.7
NDEL1-209ENST00000580738 TINCRA0A1B0GVN0 87 aa10.69□□□□□ -0.7
NDEL1-209ENST00000580738 PFN2P35080 140 aa10.69□□□□□ -0.7
NDEL1-209ENST00000580738 Q8NBF4 154 aa10.69□□□□□ -0.7
NDEL1-209ENST00000580738 GNB1LQ9BYB4 327 aa10.69□□□□□ -0.7
NDEL1-209ENST00000580738 IGLV5-45A0A087WSX0 123 aa10.68□□□□□ -0.7
NDEL1-209ENST00000580738 K7EMI3 77 aa10.68□□□□□ -0.7
NDEL1-209ENST00000580738 TOMM6Q96B49 74 aa10.68□□□□□ -0.7
NDEL1-209ENST00000580738 Q8NDZ9 215 aa10.67□□□□□ -0.7
NDEL1-209ENST00000580738 ATP5LO75964 103 aa10.66□□□□□ -0.7
NDEL1-209ENST00000580738 KRTAP19-2Q3LHN2 52 aa10.66□□□□□ -0.7
NDEL1-209ENST00000580738 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
NDEL1-209ENST00000580738 NXT2Q9NPJ8 142 aaKnown RBP10.66□□□□□ -0.7
NDEL1-209ENST00000580738 ADCYAP1P18509 176 aa10.65□□□□□ -0.7
NDEL1-209ENST00000580738 MT1HP80294 61 aa10.64□□□□□ -0.71
NDEL1-209ENST00000580738 ERASQ7Z444 233 aa10.64□□□□□ -0.71
NDEL1-209ENST00000580738 AKAP14Q86UN6 197 aa10.64□□□□□ -0.71
NDEL1-209ENST00000580738 SCGB3A1Q96QR1 104 aa10.64□□□□□ -0.71
NDEL1-209ENST00000580738 SPINK1P00995 79 aa10.63□□□□□ -0.71
NDEL1-209ENST00000580738 RAB14P61106 215 aa10.63□□□□□ -0.71
NDEL1-209ENST00000580738 PEA15Q15121 130 aa10.63□□□□□ -0.71
NDEL1-209ENST00000580738 G0S2P27469 103 aa10.62□□□□□ -0.71
NDEL1-209ENST00000580738 RPL24P83731 157 aaKnown RBP10.62□□□□□ -0.71
NDEL1-209ENST00000580738 XP32Q5T750 250 aa10.61□□□□□ -0.71
NDEL1-209ENST00000580738 CST9LQ9H4G1 147 aa10.61□□□□□ -0.71
NDEL1-209ENST00000580738 ERG28Q9UKR5 140 aa10.59□□□□□ -0.71
NDEL1-209ENST00000580738 ZNF706Q9Y5V0 76 aaPredicted RBP10.59□□□□□ -0.71
NDEL1-209ENST00000580738 A0A1B0GVG6 124 aa10.58□□□□□ -0.72
NDEL1-209ENST00000580738 Q8N377 158 aa10.57□□□□□ -0.72
NDEL1-209ENST00000580738 MRPL18Q9H0U6 180 aaKnown RBP10.57□□□□□ -0.72
NDEL1-209ENST00000580738 NDUFA12Q9UI09 145 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms