RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 TOMM7Q9P0U1 55 aa7.03□□□□□ -1.28
SSH2-208ENST00000579040 TNXBP22105 4242 aa7.02□□□□□ -1.29
SSH2-208ENST00000579040 H0Y9J4 135 aa7.02□□□□□ -1.29
SSH2-208ENST00000579040 UBE2BP63146 152 aa7.02□□□□□ -1.29
SSH2-208ENST00000579040 ODF1Q14990 250 aa7.02□□□□□ -1.29
SSH2-208ENST00000579040 C9orf129Q5T035 196 aaKnown RBP7.02□□□□□ -1.29
SSH2-208ENST00000579040 ERASQ7Z444 233 aa7.02□□□□□ -1.29
SSH2-208ENST00000579040 KRTAP11-1Q8IUC1 163 aa7.02□□□□□ -1.29
SSH2-208ENST00000579040 ALKBH7Q9BT30 221 aaPredicted RBP7.02□□□□□ -1.29
SSH2-208ENST00000579040 CDKN2A-AS1Q9UH64 79 aa7.02□□□□□ -1.29
SSH2-208ENST00000579040 S100PP25815 95 aa7.01□□□□□ -1.29
SSH2-208ENST00000579040 CXCL5P42830 114 aa7.01□□□□□ -1.29
SSH2-208ENST00000579040 KIAA1644Q3SXP7 199 aa7.01□□□□□ -1.29
SSH2-208ENST00000579040 COX19Q49B96 90 aa7.01□□□□□ -1.29
SSH2-208ENST00000579040 SLC7A5P1Q8MH63 180 aa7.01□□□□□ -1.29
SSH2-208ENST00000579040 SEC11CQ9BY50 192 aa7.01□□□□□ -1.29
SSH2-208ENST00000579040 GNB1LQ9BYB4 327 aa7.01□□□□□ -1.29
SSH2-208ENST00000579040 LINC01546A6NGU7 62 aa7□□□□□ -1.29
SSH2-208ENST00000579040 F8VRH5 84 aa7□□□□□ -1.29
SSH2-208ENST00000579040 SCGB3A1Q96QR1 104 aa7□□□□□ -1.29
SSH2-208ENST00000579040 ATP6V1G1O75348 118 aa6.99□□□□□ -1.29
SSH2-208ENST00000579040 LINC00469Q8N7U9 141 aa6.99□□□□□ -1.29
SSH2-208ENST00000579040 IGLV1-50A0A075B6I6 118 aa6.98□□□□□ -1.29
SSH2-208ENST00000579040 IGLV5-45A0A087WSX0 123 aa6.98□□□□□ -1.29
SSH2-208ENST00000579040 TINCRA0A1B0GVN0 87 aa6.98□□□□□ -1.29
SSH2-208ENST00000579040 SMIM1B2RUZ4 78 aa6.98□□□□□ -1.29
SSH2-208ENST00000579040 PDZD11Q5EBL8 140 aa6.98□□□□□ -1.29
SSH2-208ENST00000579040 NUPR1O60356 82 aa6.97□□□□□ -1.29
SSH2-208ENST00000579040 LBHQ53QV2 105 aaPredicted RBP6.97□□□□□ -1.29
SSH2-208ENST00000579040 PRR26Q8N8Z3 221 aa6.97□□□□□ -1.29
SSH2-208ENST00000579040 TP73-AS1Q9UF72 201 aa6.97□□□□□ -1.29
SSH2-208ENST00000579040 KRTAP1-4P0C5Y4 121 aa6.96□□□□□ -1.3
SSH2-208ENST00000579040 FA2HQ7L5A8 372 aa6.96□□□□□ -1.3
SSH2-208ENST00000579040 COX7B2Q8TF08 81 aa6.96□□□□□ -1.3
SSH2-208ENST00000579040 XAGE1AQ9HD64 81 aa6.96□□□□□ -1.3
SSH2-208ENST00000579040 C22orf24Q9Y442 160 aa6.96□□□□□ -1.3
SSH2-208ENST00000579040 RPL13AP40429 203 aaKnown RBP6.95□□□□□ -1.3
SSH2-208ENST00000579040 PMVKQ15126 192 aa6.95□□□□□ -1.3
SSH2-208ENST00000579040 RHEBQ15382 184 aa6.95□□□□□ -1.3
SSH2-208ENST00000579040 NDUFA5Q16718 116 aa6.95□□□□□ -1.3
SSH2-208ENST00000579040 C10orf91Q5T1B1 145 aa6.95□□□□□ -1.3
SSH2-208ENST00000579040 COMMD7Q86VX2 200 aa6.95□□□□□ -1.3
SSH2-208ENST00000579040 MRPL18Q9H0U6 180 aaKnown RBP6.95□□□□□ -1.3
SSH2-208ENST00000579040 CST9LQ9H4G1 147 aa6.95□□□□□ -1.3
SSH2-208ENST00000579040 SMCO4Q9NRQ5 59 aa6.95□□□□□ -1.3
SSH2-208ENST00000579040 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
SSH2-208ENST00000579040 ZNF861PO60384 105 aa6.94□□□□□ -1.3
SSH2-208ENST00000579040 FABP9Q0Z7S8 132 aa6.94□□□□□ -1.3
SSH2-208ENST00000579040 MRPL55Q7Z7F7 128 aaKnown RBP6.94□□□□□ -1.3
SSH2-208ENST00000579040 H3BRM9 83 aa6.93□□□□□ -1.3
SSH2-208ENST00000579040 CARHSP1Q9Y2V2 147 aaKnown RBP6.93□□□□□ -1.3
SSH2-208ENST00000579040 LRP2P98164 4655 aa6.92□□□□□ -1.3
SSH2-208ENST00000579040 SPINK8P0C7L1 97 aa6.92□□□□□ -1.3
SSH2-208ENST00000579040 RPS10P5Q9NQ39 176 aa6.92□□□□□ -1.3
SSH2-208ENST00000579040 IGLV5-37A0A075B6J1 123 aa6.91□□□□□ -1.3
SSH2-208ENST00000579040 IGLC3P0DOY3 106 aa6.91□□□□□ -1.3
SSH2-208ENST00000579040 RPL28P46779 137 aaKnown RBP6.91□□□□□ -1.3
SSH2-208ENST00000579040 BCE1O60756 84 aa6.9□□□□□ -1.3
SSH2-208ENST00000579040 ATP5LO75964 103 aa6.9□□□□□ -1.3
SSH2-208ENST00000579040 A0A096LNJ9 63 aa6.89□□□□□ -1.31
SSH2-208ENST00000579040 IGLV5-39A0A0G2JS06 123 aa6.89□□□□□ -1.31
SSH2-208ENST00000579040 C18orf32Q8TCD1 76 aa6.89□□□□□ -1.31
SSH2-208ENST00000579040 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
SSH2-208ENST00000579040 HBDP02042 147 aa6.88□□□□□ -1.31
SSH2-208ENST00000579040 LINC00614P0C842 121 aa6.88□□□□□ -1.31
SSH2-208ENST00000579040 NKAPP1Q8N9T2 125 aa6.88□□□□□ -1.31
SSH2-208ENST00000579040 TRAPPC1Q9Y5R8 145 aa6.88□□□□□ -1.31
SSH2-208ENST00000579040 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
SSH2-208ENST00000579040 ZNF22P17026 224 aaPredicted RBP6.87□□□□□ -1.31
SSH2-208ENST00000579040 NDUFA6P56556 154 aa6.87□□□□□ -1.31
SSH2-208ENST00000579040 RAB5BP61020 215 aa6.87□□□□□ -1.31
SSH2-208ENST00000579040 URB1-AS1Q96HZ7 61 aa6.87□□□□□ -1.31
SSH2-208ENST00000579040 SFTA2Q6UW10 78 aa6.86□□□□□ -1.31
SSH2-208ENST00000579040 GAGE10A6NGK3 116 aa6.85□□□□□ -1.31
SSH2-208ENST00000579040 S100A1P23297 94 aa6.85□□□□□ -1.31
SSH2-208ENST00000579040 COX17Q14061 63 aa6.85□□□□□ -1.31
SSH2-208ENST00000579040 SNAPINO95295 136 aa6.84□□□□□ -1.31
SSH2-208ENST00000579040 CRYGAP11844 174 aa6.84□□□□□ -1.31
SSH2-208ENST00000579040 PFN2P35080 140 aa6.84□□□□□ -1.31
SSH2-208ENST00000579040 UBE2AP49459 152 aa6.84□□□□□ -1.31
SSH2-208ENST00000579040 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.31
SSH2-208ENST00000579040 SVBPQ8N300 66 aa6.84□□□□□ -1.31
SSH2-208ENST00000579040 ERG28Q9UKR5 140 aa6.84□□□□□ -1.31
SSH2-208ENST00000579040 C11orf86A6NJI1 115 aa6.83□□□□□ -1.32
SSH2-208ENST00000579040 APOC3P02656 99 aa6.83□□□□□ -1.32
SSH2-208ENST00000579040 PMCHL1Q16048 86 aa6.83□□□□□ -1.32
SSH2-208ENST00000579040 BAGE3Q86Y29 109 aa6.83□□□□□ -1.32
SSH2-208ENST00000579040 SND1-IT1Q9HBX3 110 aa6.83□□□□□ -1.32
SSH2-208ENST00000579040 A0A087X002 238 aa6.82□□□□□ -1.32
SSH2-208ENST00000579040 VPREB1P12018 145 aa6.82□□□□□ -1.32
SSH2-208ENST00000579040 RPL24P83731 157 aaKnown RBP6.82□□□□□ -1.32
SSH2-208ENST00000579040 TMEM170BQ5T4T1 132 aa6.82□□□□□ -1.32
SSH2-208ENST00000579040 IGKV2-28A0A075B6P5 120 aa6.81□□□□□ -1.32
SSH2-208ENST00000579040 IGKV2D-28P01615 120 aa6.81□□□□□ -1.32
SSH2-208ENST00000579040 PRR4Q16378 134 aa6.81□□□□□ -1.32
SSH2-208ENST00000579040 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
SSH2-208ENST00000579040 TYMSOSQ8TAI1 123 aa6.81□□□□□ -1.32
SSH2-208ENST00000579040 ZNF625Q96I27 306 aaPredicted RBP6.81□□□□□ -1.32
SSH2-208ENST00000579040 SCO1O75880 301 aa6.8□□□□□ -1.32
SSH2-208ENST00000579040 CHCHD1Q96BP2 118 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms