RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 GAGE2DQ9UEU5 116 aa14.16□□□□□ -0.14
VAPA-205ENST00000578314 PSORS1C2Q9UIG4 136 aa14.16□□□□□ -0.14
VAPA-205ENST00000578314 FAM168BA1KXE4 195 aa14.15□□□□□ -0.14
VAPA-205ENST00000578314 NDUFC2-KCTD14E9PQ53 114 aa14.15□□□□□ -0.14
VAPA-205ENST00000578314 C6orf226Q5I0X4 101 aa14.15□□□□□ -0.14
VAPA-205ENST00000578314 TOMM7Q9P0U1 55 aa14.14□□□□□ -0.15
VAPA-205ENST00000578314 CKS1BP61024 79 aa14.13□□□□□ -0.15
VAPA-205ENST00000578314 FA2HQ7L5A8 372 aa14.13□□□□□ -0.15
VAPA-205ENST00000578314 REG3GQ6UW15 175 aa14.12□□□□□ -0.15
VAPA-205ENST00000578314 KRTAP7-1Q8IUC3 87 aa14.12□□□□□ -0.15
VAPA-205ENST00000578314 TINCRA0A1B0GVN0 87 aa14.11□□□□□ -0.15
VAPA-205ENST00000578314 CST9LQ9H4G1 147 aa14.11□□□□□ -0.15
VAPA-205ENST00000578314 FAM19A5Q7Z5A7 132 aaPredicted RBP14.1□□□□□ -0.15
VAPA-205ENST00000578314 SMCO4Q9NRQ5 59 aa14.1□□□□□ -0.15
VAPA-205ENST00000578314 IGLV5-45A0A087WSX0 123 aa14.09□□□□□ -0.15
VAPA-205ENST00000578314 APOC3P02656 99 aa14.09□□□□□ -0.15
VAPA-205ENST00000578314 C9orf129Q5T035 196 aaKnown RBP14.09□□□□□ -0.15
VAPA-205ENST00000578314 LINC00469Q8N7U9 141 aa14.09□□□□□ -0.15
VAPA-205ENST00000578314 TRAPPC1Q9Y5R8 145 aa14.09□□□□□ -0.15
VAPA-205ENST00000578314 C1orf137Q5JT78 98 aa14.08□□□□□ -0.16
VAPA-205ENST00000578314 SMIM1B2RUZ4 78 aa14.07□□□□□ -0.16
VAPA-205ENST00000578314 F8VRH5 84 aa14.07□□□□□ -0.16
VAPA-205ENST00000578314 KRTAP10-8P60410 259 aa14.07□□□□□ -0.16
VAPA-205ENST00000578314 PMVKQ15126 192 aa14.07□□□□□ -0.16
VAPA-205ENST00000578314 PDZD11Q5EBL8 140 aa14.07□□□□□ -0.16
VAPA-205ENST00000578314 KRTAP11-1Q8IUC1 163 aa14.07□□□□□ -0.16
VAPA-205ENST00000578314 SVBPQ8N300 66 aa14.07□□□□□ -0.16
VAPA-205ENST00000578314 SNAPINO95295 136 aa14.06□□□□□ -0.16
VAPA-205ENST00000578314 CXCL5P42830 114 aa14.06□□□□□ -0.16
VAPA-205ENST00000578314 NDUFA5Q16718 116 aa14.05□□□□□ -0.16
VAPA-205ENST00000578314 C18orf32Q8TCD1 76 aa14.05□□□□□ -0.16
VAPA-205ENST00000578314 URB1-AS1Q96HZ7 61 aa14.05□□□□□ -0.16
VAPA-205ENST00000578314 M0QXV9 152 aa14.04□□□□□ -0.16
VAPA-205ENST00000578314 IGLV7-43P04211 117 aa14.04□□□□□ -0.16
VAPA-205ENST00000578314 LINC00614P0C842 121 aa14.04□□□□□ -0.16
VAPA-205ENST00000578314 A0A096LNJ9 63 aa14.03□□□□□ -0.16
VAPA-205ENST00000578314 COX7B2Q8TF08 81 aa14.02□□□□□ -0.17
VAPA-205ENST00000578314 ODF1Q14990 250 aa14□□□□□ -0.17
VAPA-205ENST00000578314 UBE2BP63146 152 aa13.99□□□□□ -0.17
VAPA-205ENST00000578314 XAGE1AQ9HD64 81 aa13.99□□□□□ -0.17
VAPA-205ENST00000578314 HBDP02042 147 aa13.98□□□□□ -0.17
VAPA-205ENST00000578314 SPINK8P0C7L1 97 aa13.98□□□□□ -0.17
VAPA-205ENST00000578314 IGLC3P0DOY3 106 aa13.98□□□□□ -0.17
VAPA-205ENST00000578314 YPEL4Q96NS1 127 aa13.98□□□□□ -0.17
VAPA-205ENST00000578314 H3BRM9 83 aa13.97□□□□□ -0.17
VAPA-205ENST00000578314 RAB5BP61020 215 aa13.97□□□□□ -0.17
VAPA-205ENST00000578314 DIRC1Q969H9 104 aa13.97□□□□□ -0.17
VAPA-205ENST00000578314 C22orf24Q9Y442 160 aa13.96□□□□□ -0.17
VAPA-205ENST00000578314 NDUFA6P56556 154 aa13.94□□□□□ -0.18
VAPA-205ENST00000578314 PMCHL1Q16048 86 aa13.94□□□□□ -0.18
VAPA-205ENST00000578314 IGLV5-39A0A0G2JS06 123 aa13.93□□□□□ -0.18
VAPA-205ENST00000578314 LBHQ53QV2 105 aaPredicted RBP13.93□□□□□ -0.18
VAPA-205ENST00000578314 TP73-AS1Q9UF72 201 aa13.93□□□□□ -0.18
VAPA-205ENST00000578314 H0Y9J4 135 aa13.92□□□□□ -0.18
VAPA-205ENST00000578314 ATP5LO75964 103 aa13.92□□□□□ -0.18
VAPA-205ENST00000578314 ZNF22P17026 224 aaPredicted RBP13.91□□□□□ -0.18
VAPA-205ENST00000578314 LRP2P98164 4655 aa13.9□□□□□ -0.18
VAPA-205ENST00000578314 BAGE3Q86Y29 109 aa13.89□□□□□ -0.19
VAPA-205ENST00000578314 MRPL55Q7Z7F7 128 aaKnown RBP13.88□□□□□ -0.19
VAPA-205ENST00000578314 NUPR1O60356 82 aa13.87□□□□□ -0.19
VAPA-205ENST00000578314 CHCHD1Q96BP2 118 aaKnown RBP13.87□□□□□ -0.19
VAPA-205ENST00000578314 C11orf86A6NJI1 115 aa13.86□□□□□ -0.19
VAPA-205ENST00000578314 IGLV5-37A0A075B6J1 123 aa13.84□□□□□ -0.19
VAPA-205ENST00000578314 ZNF861PO60384 105 aa13.84□□□□□ -0.19
VAPA-205ENST00000578314 KRTAP1-4P0C5Y4 121 aa13.84□□□□□ -0.19
VAPA-205ENST00000578314 CBLN2Q8IUK8 224 aa13.84□□□□□ -0.19
VAPA-205ENST00000578314 PRR26Q8N8Z3 221 aa13.83□□□□□ -0.2
VAPA-205ENST00000578314 LINC00167Q96N53 147 aa13.83□□□□□ -0.2
VAPA-205ENST00000578314 TMEM170BQ5T4T1 132 aa13.82□□□□□ -0.2
VAPA-205ENST00000578314 CHTOPQ9Y3Y2 248 aaKnown RBP13.82□□□□□ -0.2
VAPA-205ENST00000578314 TRAV12-1A0A0B4J245 112 aa13.81□□□□□ -0.2
VAPA-205ENST00000578314 IGLV1-50A0A075B6I6 118 aa13.8□□□□□ -0.2
VAPA-205ENST00000578314 PFN2P35080 140 aa13.8□□□□□ -0.2
VAPA-205ENST00000578314 IFI27L1Q96BM0 104 aa13.8□□□□□ -0.2
VAPA-205ENST00000578314 COX17Q14061 63 aa13.79□□□□□ -0.2
VAPA-205ENST00000578314 ERG28Q9UKR5 140 aa13.79□□□□□ -0.2
VAPA-205ENST00000578314 RNF213Q63HN8 5207 aa13.78□□□□□ -0.2
VAPA-205ENST00000578314 RPL37AP8A6NKH3 93 aa13.78□□□□□ -0.2
VAPA-205ENST00000578314 BCE1O60756 84 aa13.78□□□□□ -0.2
VAPA-205ENST00000578314 SFTA2Q6UW10 78 aa13.78□□□□□ -0.2
VAPA-205ENST00000578314 NKAPP1Q8N9T2 125 aa13.77□□□□□ -0.21
VAPA-205ENST00000578314 ZNF625Q96I27 306 aaPredicted RBP13.77□□□□□ -0.21
VAPA-205ENST00000578314 GAGE10A6NGK3 116 aa13.76□□□□□ -0.21
VAPA-205ENST00000578314 SND1-IT1Q9HBX3 110 aa13.76□□□□□ -0.21
VAPA-205ENST00000578314 TMEM223A0PJW6 202 aa13.75□□□□□ -0.21
VAPA-205ENST00000578314 TRGC2P03986 189 aa13.75□□□□□ -0.21
VAPA-205ENST00000578314 HSBP1O75506 76 aa13.74□□□□□ -0.21
VAPA-205ENST00000578314 RPL28P46779 137 aaKnown RBP13.74□□□□□ -0.21
VAPA-205ENST00000578314 SLC7A5P1Q8MH63 180 aa13.74□□□□□ -0.21
VAPA-205ENST00000578314 FAM19A2Q8N3H0 131 aa13.73□□□□□ -0.21
VAPA-205ENST00000578314 VPREB1P12018 145 aa13.72□□□□□ -0.21
VAPA-205ENST00000578314 RPL13AP40429 203 aaKnown RBP13.71□□□□□ -0.21
VAPA-205ENST00000578314 SCO1O75880 301 aa13.7□□□□□ -0.22
VAPA-205ENST00000578314 RPL24P83731 157 aaKnown RBP13.7□□□□□ -0.22
VAPA-205ENST00000578314 LINC00310P59036 64 aa13.68□□□□□ -0.22
VAPA-205ENST00000578314 KRTAP13-1Q8IUC0 172 aa13.68□□□□□ -0.22
VAPA-205ENST00000578314 IGKV2-28A0A075B6P5 120 aa13.67□□□□□ -0.22
VAPA-205ENST00000578314 SERF1AO75920 110 aa13.67□□□□□ -0.22
VAPA-205ENST00000578314 IGKV2D-28P01615 120 aa13.67□□□□□ -0.22
VAPA-205ENST00000578314 COLCA2A8K830 154 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms