RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 RNF151Q2KHN1 245 aa8.08□□□□□ -1.12
CCDC57-211ENST00000578187 C7orf33Q8WU49 177 aa8.08□□□□□ -1.12
CCDC57-211ENST00000578187 GEMIN7Q9H840 131 aaKnown RBP8.08□□□□□ -1.12
CCDC57-211ENST00000578187 MRPL35Q9NZE8 188 aaKnown RBP8.08□□□□□ -1.12
CCDC57-211ENST00000578187 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
CCDC57-211ENST00000578187 CDKN2A-AS1Q9UH64 79 aa8.08□□□□□ -1.12
CCDC57-211ENST00000578187 LOC107984640A0A0U1RRK4 108 aa8.07□□□□□ -1.12
CCDC57-211ENST00000578187 LINC00474Q9P2X8 69 aa8.07□□□□□ -1.12
CCDC57-211ENST00000578187 ATP5LO75964 103 aa8.06□□□□□ -1.12
CCDC57-211ENST00000578187 PTTG1IPP53801 180 aa8.06□□□□□ -1.12
CCDC57-211ENST00000578187 MAJINQ3KP22 176 aa8.06□□□□□ -1.12
CCDC57-211ENST00000578187 ANKRD39Q53RE8 183 aa8.06□□□□□ -1.12
CCDC57-211ENST00000578187 C10orf25Q5T742 122 aa8.06□□□□□ -1.12
CCDC57-211ENST00000578187 PLA2G2DQ9UNK4 145 aa8.06□□□□□ -1.12
CCDC57-211ENST00000578187 PKHD1L1Q86WI1 4243 aa8.05□□□□□ -1.12
CCDC57-211ENST00000578187 IGLC3P0DOY3 106 aa8.05□□□□□ -1.12
CCDC57-211ENST00000578187 UNQ6190/PRO20217Q6UXQ8 127 aa8.05□□□□□ -1.12
CCDC57-211ENST00000578187 Q8IZM0 81 aa8.05□□□□□ -1.12
CCDC57-211ENST00000578187 LINC00469Q8N7U9 141 aa8.05□□□□□ -1.12
CCDC57-211ENST00000578187 PACRGQ96M98 296 aaPredicted RBP8.05□□□□□ -1.12
CCDC57-211ENST00000578187 C6orf48Q9UBA6 75 aa8.05□□□□□ -1.12
CCDC57-211ENST00000578187 SMIM1B2RUZ4 78 aa8.04□□□□□ -1.12
CCDC57-211ENST00000578187 SCO1O75880 301 aa8.04□□□□□ -1.12
CCDC57-211ENST00000578187 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
CCDC57-211ENST00000578187 STPG4Q8N801 248 aa8.04□□□□□ -1.12
CCDC57-211ENST00000578187 TRBV30A0A0K0K1B3 111 aa8.03□□□□□ -1.12
CCDC57-211ENST00000578187 HSBP1O75506 76 aa8.03□□□□□ -1.12
CCDC57-211ENST00000578187 PRSS2P07478 247 aa8.03□□□□□ -1.12
CCDC57-211ENST00000578187 HNRNPA3P51991 378 aaKnown RBP8.03□□□□□ -1.12
CCDC57-211ENST00000578187 LINC00310P59036 64 aa8.03□□□□□ -1.12
CCDC57-211ENST00000578187 GAGE2BQ13066 116 aa8.03□□□□□ -1.12
CCDC57-211ENST00000578187 C2orf82Q6UX34 121 aa8.03□□□□□ -1.12
CCDC57-211ENST00000578187 BAGE3Q86Y29 109 aa8.03□□□□□ -1.12
CCDC57-211ENST00000578187 RPL18AQ02543 176 aaKnown RBP8.02□□□□□ -1.13
CCDC57-211ENST00000578187 TOMM7Q9P0U1 55 aa8.02□□□□□ -1.13
CCDC57-211ENST00000578187 SERF1AO75920 110 aa8.01□□□□□ -1.13
CCDC57-211ENST00000578187 NDUFA6P56556 154 aa8.01□□□□□ -1.13
CCDC57-211ENST00000578187 IFI27L1Q96BM0 104 aa8.01□□□□□ -1.13
CCDC57-211ENST00000578187 H3BRM9 83 aa8□□□□□ -1.13
CCDC57-211ENST00000578187 ZNF22P17026 224 aaPredicted RBP8□□□□□ -1.13
CCDC57-211ENST00000578187 CXCL5P42830 114 aa8□□□□□ -1.13
CCDC57-211ENST00000578187 CKS1BP61024 79 aa8□□□□□ -1.13
CCDC57-211ENST00000578187 C6orf226Q5I0X4 101 aa8□□□□□ -1.13
CCDC57-211ENST00000578187 Q6ZRP5 223 aa8□□□□□ -1.13
CCDC57-211ENST00000578187 FAM19A2Q8N3H0 131 aa8□□□□□ -1.13
CCDC57-211ENST00000578187 TRAV12-1A0A0B4J245 112 aa7.99□□□□□ -1.13
CCDC57-211ENST00000578187 C11orf86A6NJI1 115 aa7.99□□□□□ -1.13
CCDC57-211ENST00000578187 SPINK8P0C7L1 97 aa7.99□□□□□ -1.13
CCDC57-211ENST00000578187 COX7B2Q8TF08 81 aa7.99□□□□□ -1.13
CCDC57-211ENST00000578187 IGLV5-39A0A0G2JS06 123 aa7.98□□□□□ -1.13
CCDC57-211ENST00000578187 NDUFC2-KCTD14E9PQ53 114 aa7.98□□□□□ -1.13
CCDC57-211ENST00000578187 F8VRH5 84 aa7.98□□□□□ -1.13
CCDC57-211ENST00000578187 CHTOPQ9Y3Y2 248 aaKnown RBP7.98□□□□□ -1.13
CCDC57-211ENST00000578187 A0A1W2PNN7 141 aa7.97□□□□□ -1.13
CCDC57-211ENST00000578187 C9orf116Q5BN46 136 aaPredicted RBP7.97□□□□□ -1.13
CCDC57-211ENST00000578187 LRP1Q07954 4544 aaKnown RBP7.97□□□□□ -1.13
CCDC57-211ENST00000578187 NUPR1O60356 82 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 HIST1H2BKO60814 126 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 LEPROTL1O95214 131 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 HIST1H2BJP06899 126 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 S100A1P23297 94 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 HIST1H2BOP23527 126 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 HIST1H2BBP33778 126 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 HIST1H2BDP58876 126 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 HIST1H2BCP62807 126 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 PRR3P79522 188 aaKnown RBP7.96□□□□□ -1.14
CCDC57-211ENST00000578187 HIST2H2BEQ16778 126 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.96□□□□□ -1.14
CCDC57-211ENST00000578187 HIST1H2BHQ93079 126 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 HIST1H2BNQ99877 126 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 HIST1H2BMQ99879 126 aa7.96□□□□□ -1.14
CCDC57-211ENST00000578187 TMA7Q9Y2S6 64 aaKnown RBP7.96□□□□□ -1.14
CCDC57-211ENST00000578187 H3BS24 57 aa7.95□□□□□ -1.14
CCDC57-211ENST00000578187 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
CCDC57-211ENST00000578187 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
CCDC57-211ENST00000578187 TMEM170BQ5T4T1 132 aa7.94□□□□□ -1.14
CCDC57-211ENST00000578187 FAM168BA1KXE4 195 aa7.93□□□□□ -1.14
CCDC57-211ENST00000578187 MT1HL1P0DM35 61 aa7.93□□□□□ -1.14
CCDC57-211ENST00000578187 ODF1Q14990 250 aa7.93□□□□□ -1.14
CCDC57-211ENST00000578187 C9orf129Q5T035 196 aaKnown RBP7.93□□□□□ -1.14
CCDC57-211ENST00000578187 REG3GQ6UW15 175 aa7.93□□□□□ -1.14
CCDC57-211ENST00000578187 KRTAP7-1Q8IUC3 87 aa7.93□□□□□ -1.14
CCDC57-211ENST00000578187 HSPB8Q9UJY1 196 aa7.93□□□□□ -1.14
CCDC57-211ENST00000578187 FAT3Q8TDW7 4589 aa7.92□□□□□ -1.14
CCDC57-211ENST00000578187 TMEM223A0PJW6 202 aa7.92□□□□□ -1.14
CCDC57-211ENST00000578187 SPINK6Q6UWN8 80 aa7.92□□□□□ -1.14
CCDC57-211ENST00000578187 ATP6V1G1O75348 118 aa7.91□□□□□ -1.14
CCDC57-211ENST00000578187 FABP4P15090 132 aa7.91□□□□□ -1.14
CCDC57-211ENST00000578187 PHF5AQ7RTV0 110 aaKnown RBP7.91□□□□□ -1.14
CCDC57-211ENST00000578187 FAM19A5Q7Z5A7 132 aaPredicted RBP7.91□□□□□ -1.14
CCDC57-211ENST00000578187 H0Y8G0 127 aa7.9□□□□□ -1.14
CCDC57-211ENST00000578187 SFTA2Q6UW10 78 aa7.9□□□□□ -1.14
CCDC57-211ENST00000578187 LINC01600Q96MT4 127 aa7.9□□□□□ -1.14
CCDC57-211ENST00000578187 COA6Q5JTJ3 125 aaKnown RBP7.89□□□□□ -1.15
CCDC57-211ENST00000578187 ZNF625Q96I27 306 aaPredicted RBP7.89□□□□□ -1.15
CCDC57-211ENST00000578187 XAGE1AQ9HD64 81 aa7.89□□□□□ -1.15
CCDC57-211ENST00000578187 M0QXV9 152 aa7.88□□□□□ -1.15
CCDC57-211ENST00000578187 PLNP26678 52 aa7.88□□□□□ -1.15
CCDC57-211ENST00000578187 MAP1LC3CQ9BXW4 147 aa7.87□□□□□ -1.15
CCDC57-211ENST00000578187 PSORS1C2Q9UIG4 136 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms