RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 GCSHP23434 173 aa12.36□□□□□ -0.43
PRKCA-203ENST00000578063 CEND1Q8N111 149 aa12.36□□□□□ -0.43
PRKCA-203ENST00000578063 KRTAP1-5Q9BYS1 174 aa12.36□□□□□ -0.43
PRKCA-203ENST00000578063 MEIG1Q5JSS6 88 aa12.35□□□□□ -0.43
PRKCA-203ENST00000578063 Q6ZVH6 145 aa12.35□□□□□ -0.43
PRKCA-203ENST00000578063 TM2D2Q9BX73 214 aa12.35□□□□□ -0.43
PRKCA-203ENST00000578063 SPANXDQ9BXN6 97 aa12.34□□□□□ -0.43
PRKCA-203ENST00000578063 SPANXCQ9NY87 97 aa12.34□□□□□ -0.43
PRKCA-203ENST00000578063 LBHQ53QV2 105 aaPredicted RBP12.34□□□□□ -0.43
PRKCA-203ENST00000578063 NBDYA0A0U1RRE5 68 aa12.33□□□□□ -0.44
PRKCA-203ENST00000578063 C15orf56Q8N910 161 aa12.33□□□□□ -0.44
PRKCA-203ENST00000578063 DNAH1Q9P2D7 4330 aa12.33□□□□□ -0.44
PRKCA-203ENST00000578063 C3orf84H3BNL1 204 aa12.32□□□□□ -0.44
PRKCA-203ENST00000578063 C2orf82Q6UX34 121 aa12.32□□□□□ -0.44
PRKCA-203ENST00000578063 ZNF561-AS1K7EIQ3 104 aa12.31□□□□□ -0.44
PRKCA-203ENST00000578063 CASC10Q5T4H9 136 aa12.31□□□□□ -0.44
PRKCA-203ENST00000578063 ADAMTSL4-AS1Q5T5F5 129 aa12.31□□□□□ -0.44
PRKCA-203ENST00000578063 LYSTQ99698 3801 aa12.31□□□□□ -0.44
PRKCA-203ENST00000578063 PTTG1IPP53801 180 aa12.31□□□□□ -0.44
PRKCA-203ENST00000578063 FXYD2P54710 66 aa12.31□□□□□ -0.44
PRKCA-203ENST00000578063 GVQW2A0A096LPI5 108 aaPredicted RBP12.3□□□□□ -0.44
PRKCA-203ENST00000578063 SMIM13P0DJ93 91 aa12.3□□□□□ -0.44
PRKCA-203ENST00000578063 COL5A1-AS1Q5SY13 56 aa12.3□□□□□ -0.44
PRKCA-203ENST00000578063 NTN5Q8WTR8 489 aaPredicted RBP12.3□□□□□ -0.44
PRKCA-203ENST00000578063 TMEM238LA0A1B0GVL6 79 aa12.29□□□□□ -0.44
PRKCA-203ENST00000578063 A6NDN8 102 aa12.29□□□□□ -0.44
PRKCA-203ENST00000578063 A6NJY4 79 aa12.29□□□□□ -0.44
PRKCA-203ENST00000578063 ERG28Q9UKR5 140 aa12.29□□□□□ -0.44
PRKCA-203ENST00000578063 IFITM1P13164 125 aa12.28□□□□□ -0.44
PRKCA-203ENST00000578063 HIGD2BQ4VC39 106 aa12.28□□□□□ -0.44
PRKCA-203ENST00000578063 C6orf223Q8N319 242 aa12.28□□□□□ -0.44
PRKCA-203ENST00000578063 C2orf48Q96LS8 159 aa12.28□□□□□ -0.44
PRKCA-203ENST00000578063 VPS13DQ5THJ4 4388 aa12.28□□□□□ -0.44
PRKCA-203ENST00000578063 F8WDY8 70 aa12.28□□□□□ -0.44
PRKCA-203ENST00000578063 COPS9Q8WXC6 57 aa12.28□□□□□ -0.44
PRKCA-203ENST00000578063 A0A0U1RRA0 63 aa12.27□□□□□ -0.45
PRKCA-203ENST00000578063 RPL24P83731 157 aaKnown RBP12.27□□□□□ -0.45
PRKCA-203ENST00000578063 MUSTN1Q8IVN3 82 aa12.27□□□□□ -0.45
PRKCA-203ENST00000578063 LINC00526Q96FQ7 95 aa12.27□□□□□ -0.45
PRKCA-203ENST00000578063 LINC00158P58513 81 aa12.26□□□□□ -0.45
PRKCA-203ENST00000578063 COX17Q14061 63 aa12.26□□□□□ -0.45
PRKCA-203ENST00000578063 DAND5Q8N907 189 aa12.26□□□□□ -0.45
PRKCA-203ENST00000578063 USP17L23D6RBM5 183 aa12.25□□□□□ -0.45
PRKCA-203ENST00000578063 UNQ6190/PRO20217Q6UXQ8 127 aa12.25□□□□□ -0.45
PRKCA-203ENST00000578063 CAMK2N2Q96S95 79 aa12.25□□□□□ -0.45
PRKCA-203ENST00000578063 PSCAO43653 123 aa12.25□□□□□ -0.45
PRKCA-203ENST00000578063 PFN2P35080 140 aa12.25□□□□□ -0.45
PRKCA-203ENST00000578063 PPDPFQ9H3Y8 114 aa12.25□□□□□ -0.45
PRKCA-203ENST00000578063 C10orf25Q5T742 122 aa12.24□□□□□ -0.45
PRKCA-203ENST00000578063 MIR7-3HGQ8N6C7 128 aa12.24□□□□□ -0.45
PRKCA-203ENST00000578063 LINC00308Q8TCZ7 52 aa12.24□□□□□ -0.45
PRKCA-203ENST00000578063 NHP2Q9NX24 153 aaKnown RBP12.24□□□□□ -0.45
PRKCA-203ENST00000578063 TRBV30A0A0K0K1B3 111 aa12.23□□□□□ -0.45
PRKCA-203ENST00000578063 LY6G6CO95867 125 aa12.23□□□□□ -0.45
PRKCA-203ENST00000578063 NPC2P61916 151 aa12.23□□□□□ -0.45
PRKCA-203ENST00000578063 LINC00476Q8WZB0 136 aa12.23□□□□□ -0.45
PRKCA-203ENST00000578063 A4D1N5 150 aa12.22□□□□□ -0.45
PRKCA-203ENST00000578063 C6orf48Q9UBA6 75 aa12.22□□□□□ -0.45
PRKCA-203ENST00000578063 A0A1B0GWB2 263 aa12.21□□□□□ -0.45
PRKCA-203ENST00000578063 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.2□□□□□ -0.46
PRKCA-203ENST00000578063 M0R2N4 97 aa12.2□□□□□ -0.46
PRKCA-203ENST00000578063 SYCNQ0VAF6 134 aa12.2□□□□□ -0.46
PRKCA-203ENST00000578063 C9orf116Q5BN46 136 aaPredicted RBP12.2□□□□□ -0.46
PRKCA-203ENST00000578063 SOSTDC1Q6X4U4 206 aa12.2□□□□□ -0.46
PRKCA-203ENST00000578063 Q6ZR54 194 aa12.2□□□□□ -0.46
PRKCA-203ENST00000578063 Q6ZRU5 148 aa12.2□□□□□ -0.46
PRKCA-203ENST00000578063 K7ERJ3 54 aa12.18□□□□□ -0.46
PRKCA-203ENST00000578063 EIF4EBP3O60516 100 aaPredicted RBP12.18□□□□□ -0.46
PRKCA-203ENST00000578063 Q6ZRN7 208 aaPredicted RBP12.18□□□□□ -0.46
PRKCA-203ENST00000578063 LECT2O14960 151 aa12.17□□□□□ -0.46
PRKCA-203ENST00000578063 C14orf177Q52M58 125 aa12.17□□□□□ -0.46
PRKCA-203ENST00000578063 A0A0B4J2C4 111 aa12.17□□□□□ -0.46
PRKCA-203ENST00000578063 TAX1BP3O14907 124 aa12.17□□□□□ -0.46
PRKCA-203ENST00000578063 CARD19Q96LW7 228 aa12.17□□□□□ -0.46
PRKCA-203ENST00000578063 CFC1BP0CG36 223 aa12.16□□□□□ -0.46
PRKCA-203ENST00000578063 CFC1P0CG37 223 aa12.16□□□□□ -0.46
PRKCA-203ENST00000578063 RNF151Q2KHN1 245 aa12.15□□□□□ -0.46
PRKCA-203ENST00000578063 ALMS1Q8TCU4 4167 aa12.15□□□□□ -0.46
PRKCA-203ENST00000578063 LOC107984156A0A0G2JMH3 177 aa12.14□□□□□ -0.47
PRKCA-203ENST00000578063 WFDC2Q14508 124 aa12.14□□□□□ -0.47
PRKCA-203ENST00000578063 ARL17AQ8IVW1 177 aa12.14□□□□□ -0.47
PRKCA-203ENST00000578063 RAB37Q96AX2 223 aa12.14□□□□□ -0.47
PRKCA-203ENST00000578063 SND1-IT1Q9HBX3 110 aa12.14□□□□□ -0.47
PRKCA-203ENST00000578063 NDUFC2-KCTD14E9PQ53 114 aa12.12□□□□□ -0.47
PRKCA-203ENST00000578063 SLPIP03973 132 aa12.12□□□□□ -0.47
PRKCA-203ENST00000578063 KRTAP3-3Q9BYR6 98 aa12.12□□□□□ -0.47
PRKCA-203ENST00000578063 KRTAP3-2Q9BYR7 98 aa12.12□□□□□ -0.47
PRKCA-203ENST00000578063 PRO1854Q9UHT4 67 aa12.12□□□□□ -0.47
PRKCA-203ENST00000578063 LRCOL1A6NCL2 159 aa12.11□□□□□ -0.47
PRKCA-203ENST00000578063 DNAH6Q9C0G6 4158 aa12.1□□□□□ -0.47
PRKCA-203ENST00000578063 C9orf118A6NHY6 69 aa12.1□□□□□ -0.47
PRKCA-203ENST00000578063 CNBPP62633 177 aaKnown RBP12.1□□□□□ -0.47
PRKCA-203ENST00000578063 TLX1NBP0CAT3 122 aa12.09□□□□□ -0.47
PRKCA-203ENST00000578063 C1orf134Q5TEV5 83 aa12.09□□□□□ -0.47
PRKCA-203ENST00000578063 DNAH10Q8IVF4 4471 aa12.09□□□□□ -0.47
PRKCA-203ENST00000578063 PGPEP1Q9NXJ5 209 aa12.08□□□□□ -0.47
PRKCA-203ENST00000578063 NDUFC2O95298 119 aa12.08□□□□□ -0.48
PRKCA-203ENST00000578063 A0A1B0GV90 55 aa12.07□□□□□ -0.48
PRKCA-203ENST00000578063 H3BUT2 72 aa12.06□□□□□ -0.48
PRKCA-203ENST00000578063 TSPAN13O95857 204 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 317.1 ms