RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 C10orf25Q5T742 122 aa7.67□□□□□ -1.18
SEC22B-201ENST00000578049 PRO0628Q9UI54 55 aa7.67□□□□□ -1.18
SEC22B-201ENST00000578049 COL5A1P20908 1838 aaPredicted RBP7.67□□□□□ -1.18
SEC22B-201ENST00000578049 FAM30AQ9NZY2 134 aa7.67□□□□□ -1.18
SEC22B-201ENST00000578049 PMAIP1Q13794 54 aa7.66□□□□□ -1.18
SEC22B-201ENST00000578049 PRRC2AP48634 2157 aaKnown RBP7.66□□□□□ -1.18
SEC22B-201ENST00000578049 IGLV4-60A0A075B6I1 120 aa7.66□□□□□ -1.18
SEC22B-201ENST00000578049 IGLV5-45A0A087WSX0 123 aa7.66□□□□□ -1.18
SEC22B-201ENST00000578049 USP9XQ93008 2570 aaPredicted RBP7.66□□□□□ -1.18
SEC22B-201ENST00000578049 PRR4Q16378 134 aa7.66□□□□□ -1.18
SEC22B-201ENST00000578049 CELA1Q9UNI1 258 aa7.66□□□□□ -1.18
SEC22B-201ENST00000578049 LINC01547P58512 204 aaPredicted RBP7.65□□□□□ -1.18
SEC22B-201ENST00000578049 ESRGQ1W209 222 aa7.65□□□□□ -1.18
SEC22B-201ENST00000578049 LINC00337Q8N6G1 96 aa7.65□□□□□ -1.19
SEC22B-201ENST00000578049 AGRNO00468 2067 aa7.64□□□□□ -1.19
SEC22B-201ENST00000578049 CPAMD8Q8IZJ3 1885 aa7.64□□□□□ -1.19
SEC22B-201ENST00000578049 SMCPP49901 116 aaPredicted RBP7.64□□□□□ -1.19
SEC22B-201ENST00000578049 LINC00315P59091 139 aa7.63□□□□□ -1.19
SEC22B-201ENST00000578049 PLAC8L1A1L4L8 177 aa7.63□□□□□ -1.19
SEC22B-201ENST00000578049 ZNF843Q8N446 348 aa7.63□□□□□ -1.19
SEC22B-201ENST00000578049 PRM2P04554 102 aa7.62□□□□□ -1.19
SEC22B-201ENST00000578049 C18orf65Q6ZTR6 163 aa7.62□□□□□ -1.19
SEC22B-201ENST00000578049 CEP192Q8TEP8 1941 aa7.62□□□□□ -1.19
SEC22B-201ENST00000578049 REG3GQ6UW15 175 aa7.62□□□□□ -1.19
SEC22B-201ENST00000578049 SOSTDC1Q6X4U4 206 aa7.62□□□□□ -1.19
SEC22B-201ENST00000578049 TRBV7-6A0A0J9YX20 115 aa7.62□□□□□ -1.19
SEC22B-201ENST00000578049 FAM19A4Q96LR4 140 aa7.62□□□□□ -1.19
SEC22B-201ENST00000578049 RPL37AP8A6NKH3 93 aa7.62□□□□□ -1.19
SEC22B-201ENST00000578049 AVPP01185 164 aa7.61□□□□□ -1.19
SEC22B-201ENST00000578049 LIMD2Q9BT23 127 aa7.61□□□□□ -1.19
SEC22B-201ENST00000578049 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
SEC22B-201ENST00000578049 IGHV3OR16-9A0A0B4J2B5 98 aa7.61□□□□□ -1.19
SEC22B-201ENST00000578049 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.61□□□□□ -1.19
SEC22B-201ENST00000578049 C16orf95Q9H693 158 aa7.6□□□□□ -1.19
SEC22B-201ENST00000578049 PTPRSQ13332 1948 aa7.6□□□□□ -1.19
SEC22B-201ENST00000578049 C9orf116Q5BN46 136 aaPredicted RBP7.6□□□□□ -1.19
SEC22B-201ENST00000578049 HCG22E2RYF7 251 aa7.59□□□□□ -1.19
SEC22B-201ENST00000578049 ABCA12Q86UK0 2595 aa7.59□□□□□ -1.19
SEC22B-201ENST00000578049 SPINK6Q6UWN8 80 aa7.59□□□□□ -1.19
SEC22B-201ENST00000578049 ADAMTS20P59510 1910 aa7.59□□□□□ -1.2
SEC22B-201ENST00000578049 IGHV4-30-4P0DP06 118 aa7.58□□□□□ -1.2
SEC22B-201ENST00000578049 Q6ZSN1 163 aa7.58□□□□□ -1.2
SEC22B-201ENST00000578049 C11orf72Q8NBR9 251 aa7.58□□□□□ -1.2
SEC22B-201ENST00000578049 A0A0J9YWU9 116 aa7.58□□□□□ -1.2
SEC22B-201ENST00000578049 USP9YO00507 2555 aaPredicted RBP7.58□□□□□ -1.2
SEC22B-201ENST00000578049 INAFM1C9JVW0 142 aa7.58□□□□□ -1.2
SEC22B-201ENST00000578049 Q8N2B8 174 aa7.58□□□□□ -1.2
SEC22B-201ENST00000578049 PRR3P79522 188 aaKnown RBP7.58□□□□□ -1.2
SEC22B-201ENST00000578049 H3BPC8 53 aa7.57□□□□□ -1.2
SEC22B-201ENST00000578049 TLN2Q9Y4G6 2542 aa7.57□□□□□ -1.2
SEC22B-201ENST00000578049 EDN2P20800 178 aa7.57□□□□□ -1.2
SEC22B-201ENST00000578049 H0Y9P7 68 aa7.57□□□□□ -1.2
SEC22B-201ENST00000578049 KLK9Q2XQG4 91 aa7.56□□□□□ -1.2
SEC22B-201ENST00000578049 LOC110117498A0A087WWA1 95 aa7.55□□□□□ -1.2
SEC22B-201ENST00000578049 C6orf223Q8N319 242 aa7.55□□□□□ -1.2
SEC22B-201ENST00000578049 A0A087WSZ3 146 aa7.55□□□□□ -1.2
SEC22B-201ENST00000578049 Q9BRP9 147 aa7.54□□□□□ -1.2
SEC22B-201ENST00000578049 PKD1L2Q7Z442 2459 aa7.54□□□□□ -1.2
SEC22B-201ENST00000578049 TP53AIP1Q9HCN2 124 aa7.54□□□□□ -1.2
SEC22B-201ENST00000578049 LY6G6DO95868 133 aa7.54□□□□□ -1.2
SEC22B-201ENST00000578049 IGLV9-49A0A0B4J1Y8 123 aa7.54□□□□□ -1.2
SEC22B-201ENST00000578049 CDSNQ15517 529 aa7.53□□□□□ -1.2
SEC22B-201ENST00000578049 SPATA3Q8NHX4 192 aa7.53□□□□□ -1.2
SEC22B-201ENST00000578049 EXPH5Q8NEV8 1989 aa7.53□□□□□ -1.2
SEC22B-201ENST00000578049 JMJD1CQ15652 2540 aa7.52□□□□□ -1.2
SEC22B-201ENST00000578049 FN1P02751 2386 aaKnown RBP7.52□□□□□ -1.21
SEC22B-201ENST00000578049 LYPD5Q6UWN5 251 aa7.52□□□□□ -1.21
SEC22B-201ENST00000578049 PSPHP1O15172 72 aa7.52□□□□□ -1.21
SEC22B-201ENST00000578049 SETD2Q9BYW2 2564 aaPredicted RBP7.51□□□□□ -1.21
SEC22B-201ENST00000578049 LRCOL1A6NCL2 159 aa7.51□□□□□ -1.21
SEC22B-201ENST00000578049 NANOS2P60321 138 aaKnown RBP7.51□□□□□ -1.21
SEC22B-201ENST00000578049 ZNF462Q96JM2 2506 aa7.5□□□□□ -1.21
SEC22B-201ENST00000578049 A0A1W2PPR1 153 aa7.5□□□□□ -1.21
SEC22B-201ENST00000578049 ERC2-IT1O76042 136 aa7.5□□□□□ -1.21
SEC22B-201ENST00000578049 ZFYVE26Q68DK2 2539 aa7.5□□□□□ -1.21
SEC22B-201ENST00000578049 NUPR2A6NF83 97 aa7.49□□□□□ -1.21
SEC22B-201ENST00000578049 Q6ZRU5 148 aa7.49□□□□□ -1.21
SEC22B-201ENST00000578049 Q6ZQT0 140 aa7.49□□□□□ -1.21
SEC22B-201ENST00000578049 C1orf64Q8NEQ6 169 aa7.49□□□□□ -1.21
SEC22B-201ENST00000578049 IGHV6-1A0A0B4J1U7 121 aa7.48□□□□□ -1.21
SEC22B-201ENST00000578049 H3BNG1 76 aa7.48□□□□□ -1.21
SEC22B-201ENST00000578049 ELOF1P60002 83 aaKnown RBP7.48□□□□□ -1.21
SEC22B-201ENST00000578049 TET2Q6N021 2002 aaPredicted RBP7.48□□□□□ -1.21
SEC22B-201ENST00000578049 Q6ZTC4 211 aa7.47□□□□□ -1.21
SEC22B-201ENST00000578049 FAM218AQ96MZ4 157 aa7.47□□□□□ -1.21
SEC22B-201ENST00000578049 CEP295Q9C0D2 2601 aa7.47□□□□□ -1.21
SEC22B-201ENST00000578049 Q8NBF4 154 aa7.46□□□□□ -1.21
SEC22B-201ENST00000578049 LINC01556Q5JQF7 62 aa7.46□□□□□ -1.21
SEC22B-201ENST00000578049 PCOTHQ58A44 107 aa7.46□□□□□ -1.22
SEC22B-201ENST00000578049 SMIM29Q86T20 159 aa7.45□□□□□ -1.22
SEC22B-201ENST00000578049 LITAFQ99732 161 aa7.45□□□□□ -1.22
SEC22B-201ENST00000578049 KIAA0087Q14695 138 aa7.44□□□□□ -1.22
SEC22B-201ENST00000578049 RAI1Q7Z5J4 1906 aaPredicted RBP7.44□□□□□ -1.22
SEC22B-201ENST00000578049 C22orf24Q9Y442 160 aa7.44□□□□□ -1.22
SEC22B-201ENST00000578049 A8MTW9 85 aa7.44□□□□□ -1.22
SEC22B-201ENST00000578049 ANKRD11Q6UB99 2663 aaPredicted RBP7.44□□□□□ -1.22
SEC22B-201ENST00000578049 GVQW2A0A096LPI5 108 aaPredicted RBP7.44□□□□□ -1.22
SEC22B-201ENST00000578049 FHL3Q13643 280 aa7.43□□□□□ -1.22
SEC22B-201ENST00000578049 OXLD1Q5BKU9 147 aa7.43□□□□□ -1.22
SEC22B-201ENST00000578049 SMCR5Q8TEV8 140 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms