RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 hADV29S1A0JD25 119 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 ZNF815PA8K554 130 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 BCE1O60756 84 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 LEPROTL1O95214 131 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 ACYP1P07311 99 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 IFI6P09912 130 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 HMGA1P17096 107 aaKnown RBP0.47□□□□□ -2.33
COPS3-213ENST00000577210 UBE2D3P61077 147 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 UBE2D2P62837 147 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 RPL38P63173 70 aaKnown RBP0.47□□□□□ -2.33
COPS3-213ENST00000577210 COX17Q14061 63 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 LINC01590Q5TEZ4 76 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 SSBP3-AS1Q7Z2R9 100 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 LINC00643Q86TS7 51 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 FAM223AQ8IWN6 122 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 DEFB106AQ8N104 65 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 AMELXQ99217 191 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 TRGV9Q99603 122 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 PLAC8Q9NZF1 115 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 KIAA0100Q14667 2235 aaKnown RBP0.47□□□□□ -2.33
COPS3-213ENST00000577210 MED13LQ71F56 2210 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 PLXNC1O60486 1568 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 IQGAP2Q13576 1575 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 TTC37Q6PGP7 1564 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 MROH2BQ7Z745 1585 aa0.47□□□□□ -2.33
COPS3-213ENST00000577210 WIZO95785 1651 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 SCN7AQ01118 1682 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 KIF14Q15058 1648 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 MADDQ8WXG6 1647 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 RNF17Q9BXT8 1623 aaKnown RBP0.46□□□□□ -2.34
COPS3-213ENST00000577210 PTPN23Q9H3S7 1636 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 GLI2P10070 1586 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 ADAMTS12P58397 1594 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 CFAP74Q9C0B2 1584 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 INO80Q9ULG1 1556 aaPredicted RBP0.46□□□□□ -2.34
COPS3-213ENST00000577210 MAST1Q9Y2H9 1570 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 TRAV22A0A0B4J277 110 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 LINC01546A6NGU7 62 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 LINC01549A6NIU2 74 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 C10orf142B7Z368 130 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 K7EMI3 77 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 CCL22O00626 93 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 UQCR11O14957 56 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 SPINK4O60575 86 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 COX6A2Q02221 97 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 C6orf201Q7Z4U5 140 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 SERP2Q8N6R1 65 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 ARHGAP5-AS1Q96IT6 56 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 NXT2Q9NPJ8 142 aaKnown RBP0.46□□□□□ -2.34
COPS3-213ENST00000577210 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.46□□□□□ -2.346e-8■■■■□ 20.3
COPS3-213ENST00000577210 CEP290O15078 2479 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 MYO7AQ13402 2215 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 CD163L1Q9NR16 1453 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 ABCA9Q8IUA7 1624 aa0.46□□□□□ -2.34
COPS3-213ENST00000577210 ABCA8O94911 1581 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 TIAM1Q13009 1591 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 DIP2AQ14689 1571 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 UGGT1Q9NYU2 1555 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 DIP2CQ9Y2E4 1556 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 SLIT1O75093 1534 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 CPS1P31327 1500 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 KCPQ6ZWJ8 1503 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 TULP4Q9NRJ4 1543 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 CHD1O14646 1710 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 ABCA3Q99758 1704 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 A0A1B0GWA3 101 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 FAM223BA6NKX1 122 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 CPSF4LA6NMK7 179 aaKnown RBP0.45□□□□□ -2.34
COPS3-213ENST00000577210 IQCF6A8MYZ5 107 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 H3BVH4 76 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 H7BZZ5 65 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 M0R3E3 92 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 ATOX1O00244 68 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 HMGN2P05204 90 aaKnown RBP0.45□□□□□ -2.34
COPS3-213ENST00000577210 COX6B1P14854 86 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 FCER1GP30273 86 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 IFI27P40305 119 aaPredicted RBP0.45□□□□□ -2.34
COPS3-213ENST00000577210 ATXN8Q156A1 80 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 TMEM263Q8WUH6 116 aaKnown RBP0.45□□□□□ -2.34
COPS3-213ENST00000577210 FAM167A-AS1Q96KT0 104 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 PSENENQ9NZ42 101 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 PRO1854Q9UHT4 67 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 UBE2D4Q9Y2X8 147 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 GPR98Q8WXG9 6306 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 LRP6O75581 1613 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 PREX2Q70Z35 1606 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 ABCA6Q8N139 1617 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 ADCY10Q96PN6 1610 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 GOLGA4Q13439 2230 aaKnown RBP0.45□□□□□ -2.34
COPS3-213ENST00000577210 ANKRD17O75179 2603 aaKnown RBP0.45□□□□□ -2.34
COPS3-213ENST00000577210 NWD1Q149M9 1564 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 ERCC6L2Q5T890 1561 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 CEP170BQ9Y4F5 1589 aaPredicted RBP0.45□□□□□ -2.34
COPS3-213ENST00000577210 SETBP1Q9Y6X0 1596 aa0.45□□□□□ -2.34
COPS3-213ENST00000577210 JMJD1CQ15652 2540 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 ABCC1P33527 1531 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 CROCC2H7BZ55 1655 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 KIF1AQ12756 1690 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 TRBV6-1A0A0K0K1D8 114 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 IGIPA6NJ69 53 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms