RNA–Protein interactions for RNA: ENST00000577208.5

NUP85-204, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-204ENST00000577208 LCE6AA0A183 80 aa2.93□□□□□ -1.94
NUP85-204ENST00000577208 IGLV6-57P01721 117 aa2.93□□□□□ -1.94
NUP85-204ENST00000577208 IGKV3D-7A0A0C4DH55 119 aa2.92□□□□□ -1.94
NUP85-204ENST00000577208 IGKV3OR2-268A0A0C4DH90 116 aa2.92□□□□□ -1.94
NUP85-204ENST00000577208 M0R135 149 aa2.92□□□□□ -1.94
NUP85-204ENST00000577208 CCL18P55774 89 aa2.92□□□□□ -1.94
NUP85-204ENST00000577208 DEFB132Q7Z7B7 95 aa2.92□□□□□ -1.94
NUP85-204ENST00000577208 HIGD2AQ9BW72 106 aa2.92□□□□□ -1.94
NUP85-204ENST00000577208 LINC00846Q9NV44 126 aa2.92□□□□□ -1.94
NUP85-204ENST00000577208 QSER1Q2KHR3 1735 aa2.92□□□□□ -1.94
NUP85-204ENST00000577208 ABCC8Q09428 1581 aa2.91□□□□□ -1.94
NUP85-204ENST00000577208 SEC16AO15027 2179 aa2.91□□□□□ -1.94
NUP85-204ENST00000577208 SHANK1Q9Y566 2161 aa2.91□□□□□ -1.94
NUP85-204ENST00000577208 F8VRH5 84 aa2.91□□□□□ -1.94
NUP85-204ENST00000577208 PDE6GP18545 87 aa2.91□□□□□ -1.94
NUP85-204ENST00000577208 HCP5Q6MZN7 132 aa2.91□□□□□ -1.94
NUP85-204ENST00000577208 Q6ZTI0 123 aa2.91□□□□□ -1.94
NUP85-204ENST00000577208 FDCSPQ8NFU4 85 aa2.91□□□□□ -1.94
NUP85-204ENST00000577208 OBSCN-AS1Q96MR7 158 aa2.91□□□□□ -1.94
NUP85-204ENST00000577208 SPRR4Q96PI1 79 aa2.91□□□□□ -1.94
NUP85-204ENST00000577208 IGLV3-1P01715 115 aa2.9□□□□□ -1.95
NUP85-204ENST00000577208 ZNF137PP52743 207 aa2.9□□□□□ -1.95
NUP85-204ENST00000577208 COX7B2Q8TF08 81 aa2.9□□□□□ -1.95
NUP85-204ENST00000577208 TXNDC17Q9BRA2 123 aa2.9□□□□□ -1.95
NUP85-204ENST00000577208 ZFHX2Q9C0A1 2572 aaPredicted RBP2.9□□□□□ -1.95
NUP85-204ENST00000577208 DLEC1Q9Y238 1755 aa2.89□□□□□ -1.95
NUP85-204ENST00000577208 CTSGP08311 255 aa2.89□□□□□ -1.95
NUP85-204ENST00000577208 CAV3P56539 151 aa2.89□□□□□ -1.95
NUP85-204ENST00000577208 C4orf3Q8WVX3 66 aa2.89□□□□□ -1.95
NUP85-204ENST00000577208 ZCCHC13Q8WW36 166 aaKnown RBP2.89□□□□□ -1.95
NUP85-204ENST00000577208 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
NUP85-204ENST00000577208 SDK1Q7Z5N4 2213 aa2.89□□□□□ -1.95
NUP85-204ENST00000577208 TULP4Q9NRJ4 1543 aa2.88□□□□□ -1.95
NUP85-204ENST00000577208 A0A087WTM6 91 aa2.88□□□□□ -1.95
NUP85-204ENST00000577208 A0A1B0GUT8 65 aa2.88□□□□□ -1.95
NUP85-204ENST00000577208 SMIM27A0A1W2PRY6 76 aa2.88□□□□□ -1.95
NUP85-204ENST00000577208 K7EMI3 77 aa2.88□□□□□ -1.95
NUP85-204ENST00000577208 M0R3E3 92 aa2.88□□□□□ -1.95
NUP85-204ENST00000577208 KRTAP10-1P60331 282 aa2.88□□□□□ -1.95
NUP85-204ENST00000577208 TMEM263Q8WUH6 116 aaKnown RBP2.88□□□□□ -1.95
NUP85-204ENST00000577208 CCL26Q9Y258 94 aa2.88□□□□□ -1.95
NUP85-204ENST00000577208 DOCK10Q96BY6 2186 aa2.88□□□□□ -1.95
NUP85-204ENST00000577208 TRAV1-2A0A0B4J238 106 aa2.87□□□□□ -1.95
NUP85-204ENST00000577208 SPINK7P58062 85 aa2.87□□□□□ -1.95
NUP85-204ENST00000577208 SNRPGP62308 76 aaKnown RBP2.87□□□□□ -1.95
NUP85-204ENST00000577208 TPRXLQ17RH7 258 aa2.87□□□□□ -1.95
NUP85-204ENST00000577208 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
NUP85-204ENST00000577208 R4GMQ9 66 aa2.87□□□□□ -1.95
NUP85-204ENST00000577208 V9GYV3 84 aa2.87□□□□□ -1.95
NUP85-204ENST00000577208 NREPQ16612 68 aa2.86□□□□□ -1.95
NUP85-204ENST00000577208 NRAPQ86VF7 1730 aa2.85□□□□□ -1.95
NUP85-204ENST00000577208 NBDYA0A0U1RRE5 68 aa2.85□□□□□ -1.95
NUP85-204ENST00000577208 J3QRE1 110 aa2.85□□□□□ -1.95
NUP85-204ENST00000577208 UQCR11O14957 56 aa2.85□□□□□ -1.95
NUP85-204ENST00000577208 LINC00322Q6ZN03 302 aaPredicted RBP2.85□□□□□ -1.95
NUP85-204ENST00000577208 WFDC6Q9BQY6 131 aa2.85□□□□□ -1.95
NUP85-204ENST00000577208 DDX60LQ5H9U9 1706 aaKnown RBP2.85□□□□□ -1.95
NUP85-204ENST00000577208 TRAV21A0A0B4J279 112 aa2.84□□□□□ -1.95
NUP85-204ENST00000577208 TRBV6-4A0A1B0GX49 114 aa2.84□□□□□ -1.95
NUP85-204ENST00000577208 FCER1GP30273 86 aa2.84□□□□□ -1.95
NUP85-204ENST00000577208 NOTCH2Q04721 2471 aa2.84□□□□□ -1.96
NUP85-204ENST00000577208 NDUFB1O75438 58 aa2.83□□□□□ -1.96
NUP85-204ENST00000577208 DNAL4O96015 105 aa2.83□□□□□ -1.96
NUP85-204ENST00000577208 SERF2P84101 59 aa2.83□□□□□ -1.96
NUP85-204ENST00000577208 SPACA4Q8TDM5 124 aa2.83□□□□□ -1.96
NUP85-204ENST00000577208 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
NUP85-204ENST00000577208 CEP192Q8TEP8 1941 aa2.83□□□□□ -1.96
NUP85-204ENST00000577208 LINC01546A6NGU7 62 aa2.82□□□□□ -1.96
NUP85-204ENST00000577208 JMJD7-PLA2G4BH0Y9G9 81 aa2.82□□□□□ -1.96
NUP85-204ENST00000577208 MGPP08493 103 aa2.82□□□□□ -1.96
NUP85-204ENST00000577208 ENHOQ6UWT2 76 aa2.82□□□□□ -1.96
NUP85-204ENST00000577208 LINC00208Q96KT6 92 aa2.82□□□□□ -1.96
NUP85-204ENST00000577208 LINC00472Q9H8W2 130 aa2.82□□□□□ -1.96
NUP85-204ENST00000577208 DEPDC5O75140 1603 aa2.82□□□□□ -1.96
NUP85-204ENST00000577208 A0A0G2JQZ4 141 aa2.81□□□□□ -1.96
NUP85-204ENST00000577208 H0Y9P7 68 aa2.81□□□□□ -1.96
NUP85-204ENST00000577208 IL9P15248 144 aa2.81□□□□□ -1.96
NUP85-204ENST00000577208 BRWD1Q9NSI6 2320 aa2.81□□□□□ -1.96
NUP85-204ENST00000577208 DDX60Q8IY21 1712 aaKnown RBP2.8□□□□□ -1.96
NUP85-204ENST00000577208 SAMD9LQ8IVG5 1584 aa2.8□□□□□ -1.96
NUP85-204ENST00000577208 IGKV2-40A0A087WW87 121 aaPredicted RBP2.8□□□□□ -1.96
NUP85-204ENST00000577208 IGIPA6NJ69 53 aa2.8□□□□□ -1.96
NUP85-204ENST00000577208 IGKV2D-40P01614 121 aaPredicted RBP2.8□□□□□ -1.96
NUP85-204ENST00000577208 RNASE3P12724 160 aaKnown RBP2.8□□□□□ -1.96
NUP85-204ENST00000577208 COX6B1P14854 86 aa2.8□□□□□ -1.96
NUP85-204ENST00000577208 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
NUP85-204ENST00000577208 TRBV6-1A0A0K0K1D8 114 aa2.79□□□□□ -1.96
NUP85-204ENST00000577208 Q96NJ1 140 aa2.79□□□□□ -1.96
NUP85-204ENST00000577208 COL5A1P20908 1838 aaPredicted RBP2.78□□□□□ -1.96
NUP85-204ENST00000577208 LINC00959A0A1B0GUT2 108 aa2.78□□□□□ -1.96
NUP85-204ENST00000577208 PLNP26678 52 aa2.78□□□□□ -1.96
NUP85-204ENST00000577208 FXYD3Q14802 87 aa2.78□□□□□ -1.96
NUP85-204ENST00000577208 E9PCH4 1651 aa2.77□□□□□ -1.97
NUP85-204ENST00000577208 CTXND1A0A1B0GTU2 59 aa2.77□□□□□ -1.97
NUP85-204ENST00000577208 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
NUP85-204ENST00000577208 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
NUP85-204ENST00000577208 C10orf113Q5VZT2 155 aa2.77□□□□□ -1.97
NUP85-204ENST00000577208 C5orf56Q8N8D9 126 aa2.77□□□□□ -1.97
NUP85-204ENST00000577208 ZNF625Q96I27 306 aaPredicted RBP2.77□□□□□ -1.97
NUP85-204ENST00000577208 TMEM14CQ9P0S9 112 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms