RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	LINC00242	Q5T6M2	205 aa		5.28	□□□□□ -1.56
TOM1L1-223	ENST00000576932	LCE1A	Q5T7P2	110 aa		5.28	□□□□□ -1.56
TOM1L1-223	ENST00000576932	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.28	□□□□□ -1.56
TOM1L1-223	ENST00000576932	FP248	Q71RG6	208 aa	Predicted RBP	5.28	□□□□□ -1.56
TOM1L1-223	ENST00000576932	AMN1	Q8IY45	258 aa		5.28	□□□□□ -1.56
TOM1L1-223	ENST00000576932	BORCS7	Q96B45	105 aa		5.28	□□□□□ -1.56
TOM1L1-223	ENST00000576932	TRBV30	A0A0K0K1B3	111 aa		5.27	□□□□□ -1.57
TOM1L1-223	ENST00000576932	HIGD1C	A8MV81	97 aa		5.27	□□□□□ -1.57
TOM1L1-223	ENST00000576932	NDUFC2-KCTD14	E9PQ53	114 aa		5.27	□□□□□ -1.57
TOM1L1-223	ENST00000576932	TMEM250	H0YL14	139 aa		5.27	□□□□□ -1.57
TOM1L1-223	ENST00000576932	SMKR1	H3BMG3	65 aa		5.27	□□□□□ -1.57
TOM1L1-223	ENST00000576932	LBH	Q53QV2	105 aa	Predicted RBP	5.27	□□□□□ -1.57
TOM1L1-223	ENST00000576932	C9orf129	Q5T035	196 aa	Known RBP	5.27	□□□□□ -1.57
TOM1L1-223	ENST00000576932	KIR2DL4	Q99706	377 aa		5.27	□□□□□ -1.57
TOM1L1-223	ENST00000576932	KRTAP4-1	Q9BYQ7	146 aa		5.27	□□□□□ -1.57
TOM1L1-223	ENST00000576932	BCE1	O60756	84 aa		5.26	□□□□□ -1.57
TOM1L1-223	ENST00000576932	PPP1R17	O96001	155 aa		5.26	□□□□□ -1.57
TOM1L1-223	ENST00000576932	LINC00337	Q8N6G1	96 aa		5.26	□□□□□ -1.57
TOM1L1-223	ENST00000576932	PPP1R2P9	O14990	202 aa		5.25	□□□□□ -1.57
TOM1L1-223	ENST00000576932	RPL39	P62891	51 aa	Known RBP	5.25	□□□□□ -1.57
TOM1L1-223	ENST00000576932	KIAA0087	Q14695	138 aa		5.25	□□□□□ -1.57
TOM1L1-223	ENST00000576932	TP73-AS1	Q9UF72	201 aa		5.25	□□□□□ -1.57
TOM1L1-223	ENST00000576932	IFITM10	A6NMD0	228 aa		5.24	□□□□□ -1.57
TOM1L1-223	ENST00000576932	RPL32	P62910	135 aa	Known RBP	5.24	□□□□□ -1.57
TOM1L1-223	ENST00000576932	MRPS36	P82909	103 aa	Known RBP	5.24	□□□□□ -1.57
TOM1L1-223	ENST00000576932	KRTAP13-3	Q3SY46	172 aa		5.24	□□□□□ -1.57
TOM1L1-223	ENST00000576932	TCTE3	Q8IZS6	198 aa		5.24	□□□□□ -1.57
TOM1L1-223	ENST00000576932	PACRG	Q96M98	296 aa	Predicted RBP	5.24	□□□□□ -1.57
TOM1L1-223	ENST00000576932	SPANXA1	Q9NS26	97 aa		5.24	□□□□□ -1.57
TOM1L1-223	ENST00000576932	C22orf24	Q9Y442	160 aa		5.24	□□□□□ -1.57
TOM1L1-223	ENST00000576932	TRBV24-1	A0A075B6N3	115 aa		5.23	□□□□□ -1.57
TOM1L1-223	ENST00000576932	IGKV2D-26	A0A0A0MRZ7	120 aa		5.23	□□□□□ -1.57
TOM1L1-223	ENST00000576932	MT3	P25713	68 aa		5.23	□□□□□ -1.57
TOM1L1-223	ENST00000576932	LINC01551	Q86U37	167 aa		5.23	□□□□□ -1.57
TOM1L1-223	ENST00000576932	C20orf78	Q9BR46	151 aa		5.23	□□□□□ -1.57
TOM1L1-223	ENST00000576932	OSTC	Q9NRP0	149 aa		5.23	□□□□□ -1.57
TOM1L1-223	ENST00000576932	ANAPC11	Q9NYG5	84 aa		5.23	□□□□□ -1.57
TOM1L1-223	ENST00000576932	TGIF2-C20orf24	A0A0A6YYL0	155 aa		5.22	□□□□□ -1.57
TOM1L1-223	ENST00000576932	TCAP	O15273	167 aa		5.22	□□□□□ -1.57
TOM1L1-223	ENST00000576932	HBB	P68871	147 aa		5.22	□□□□□ -1.57
TOM1L1-223	ENST00000576932	RIG	Q13278	110 aa		5.22	□□□□□ -1.57
TOM1L1-223	ENST00000576932	MRPL51	Q4U2R6	128 aa	Known RBP	5.22	□□□□□ -1.57
TOM1L1-223	ENST00000576932	FAM104B	Q5XKR9	115 aa		5.22	□□□□□ -1.57
TOM1L1-223	ENST00000576932	SPAG11A	Q6PDA7	123 aa		5.22	□□□□□ -1.57
TOM1L1-223	ENST00000576932	C2orf82	Q6UX34	121 aa		5.22	□□□□□ -1.57
TOM1L1-223	ENST00000576932	SLC51B	Q86UW2	128 aa		5.22	□□□□□ -1.57
TOM1L1-223	ENST00000576932		V9GYV3	84 aa		5.22	□□□□□ -1.57
TOM1L1-223	ENST00000576932	LINC00862	A6NCI5	91 aa		5.21	□□□□□ -1.58
TOM1L1-223	ENST00000576932	SMIM1	B2RUZ4	78 aa		5.21	□□□□□ -1.58
TOM1L1-223	ENST00000576932	MT1H	P80294	61 aa		5.21	□□□□□ -1.58
TOM1L1-223	ENST00000576932	MRPL55	Q7Z7F7	128 aa	Known RBP	5.21	□□□□□ -1.58
TOM1L1-223	ENST00000576932	AKAP14	Q86UN6	197 aa		5.21	□□□□□ -1.58
TOM1L1-223	ENST00000576932	KRTAP13-1	Q8IUC0	172 aa		5.21	□□□□□ -1.58
TOM1L1-223	ENST00000576932	SMIM7	Q9BQ49	75 aa		5.21	□□□□□ -1.58
TOM1L1-223	ENST00000576932	SMIM2	Q9BVW6	85 aa		5.21	□□□□□ -1.58
TOM1L1-223	ENST00000576932	ZNF727	A8MUV8	499 aa		5.2	□□□□□ -1.58
TOM1L1-223	ENST00000576932	CEBPG	P53567	150 aa		5.2	□□□□□ -1.58
TOM1L1-223	ENST00000576932	CKS2	P33552	79 aa		5.19	□□□□□ -1.58
TOM1L1-223	ENST00000576932	KRTAP19-2	Q3LHN2	52 aa		5.19	□□□□□ -1.58
TOM1L1-223	ENST00000576932	SMIM29	Q86T20	159 aa		5.19	□□□□□ -1.58
TOM1L1-223	ENST00000576932	LINC01561	Q8N1V8	128 aa		5.19	□□□□□ -1.58
TOM1L1-223	ENST00000576932	NAT8B	Q9UHF3	227 aa		5.19	□□□□□ -1.58
TOM1L1-223	ENST00000576932	KRTAP10-6	P60371	365 aa	Predicted RBP	5.18	□□□□□ -1.58
TOM1L1-223	ENST00000576932	FAM74A3	Q4VXF1	159 aa		5.18	□□□□□ -1.58
TOM1L1-223	ENST00000576932	PYGO1	Q9Y3Y4	419 aa		5.18	□□□□□ -1.58
TOM1L1-223	ENST00000576932	IGLV4-3	A0A075B6K6	122 aa		5.17	□□□□□ -1.58
TOM1L1-223	ENST00000576932		D6R8Y8	96 aa		5.17	□□□□□ -1.58
TOM1L1-223	ENST00000576932	NPY	P01303	97 aa		5.17	□□□□□ -1.58
TOM1L1-223	ENST00000576932	IFI27	P40305	119 aa	Predicted RBP	5.17	□□□□□ -1.58
TOM1L1-223	ENST00000576932	UBE2A	P49459	152 aa		5.17	□□□□□ -1.58
TOM1L1-223	ENST00000576932	LINC00469	Q8N7U9	141 aa		5.17	□□□□□ -1.58
TOM1L1-223	ENST00000576932		A0A1B0GW15	77 aa		5.16	□□□□□ -1.58
TOM1L1-223	ENST00000576932	SMIM27	A0A1W2PRY6	76 aa		5.16	□□□□□ -1.58
TOM1L1-223	ENST00000576932	SRP19	P09132	144 aa	Known RBP	5.16	□□□□□ -1.58
TOM1L1-223	ENST00000576932	PNRC1	Q12796	327 aa	Predicted RBP	5.16	□□□□□ -1.58
TOM1L1-223	ENST00000576932	ALKAL2	Q6UX46	152 aa		5.16	□□□□□ -1.58
TOM1L1-223	ENST00000576932	TMEM141	Q96I45	108 aa		5.16	□□□□□ -1.58
TOM1L1-223	ENST00000576932	EIF5A2	Q9GZV4	153 aa	Known RBP	5.16	□□□□□ -1.58
TOM1L1-223	ENST00000576932	XAGE1A	Q9HD64	81 aa		5.16	□□□□□ -1.58
TOM1L1-223	ENST00000576932	KIAA1644	Q3SXP7	199 aa		5.15	□□□□□ -1.59
TOM1L1-223	ENST00000576932		Q6ZN92	141 aa		5.15	□□□□□ -1.59
TOM1L1-223	ENST00000576932		Q8IZM0	81 aa		5.15	□□□□□ -1.59
TOM1L1-223	ENST00000576932	LINC00167	Q96N53	147 aa		5.15	□□□□□ -1.59
TOM1L1-223	ENST00000576932		A0A1B0GXF2	115 aa		5.14	□□□□□ -1.59
TOM1L1-223	ENST00000576932	PPBP	P02775	128 aa		5.14	□□□□□ -1.59
TOM1L1-223	ENST00000576932	CKS1B	P61024	79 aa		5.14	□□□□□ -1.59
TOM1L1-223	ENST00000576932	RPL23	P62829	140 aa	Known RBP	5.14	□□□□□ -1.59
TOM1L1-223	ENST00000576932	TEX43	Q6ZNM6	134 aa		5.14	□□□□□ -1.59
TOM1L1-223	ENST00000576932	FAM19A3	Q7Z5A8	133 aa		5.14	□□□□□ -1.59
TOM1L1-223	ENST00000576932	RPL37AP8	A6NKH3	93 aa		5.13	□□□□□ -1.59
TOM1L1-223	ENST00000576932		F8W036	122 aa		5.13	□□□□□ -1.59
TOM1L1-223	ENST00000576932	S100A8	P05109	93 aa		5.13	□□□□□ -1.59
TOM1L1-223	ENST00000576932	RAB5A	P20339	215 aa		5.13	□□□□□ -1.59
TOM1L1-223	ENST00000576932	C6orf226	Q5I0X4	101 aa		5.13	□□□□□ -1.59
TOM1L1-223	ENST00000576932	ZC2HC1B	Q5TFG8	222 aa		5.13	□□□□□ -1.59
TOM1L1-223	ENST00000576932	C3orf22	Q8N5N4	141 aa		5.13	□□□□□ -1.59
TOM1L1-223	ENST00000576932	DAND5	Q8N907	189 aa		5.13	□□□□□ -1.59
TOM1L1-223	ENST00000576932	AMELX	Q99217	191 aa		5.13	□□□□□ -1.59
TOM1L1-223	ENST00000576932	C2orf88	Q9BSF0	95 aa		5.13	□□□□□ -1.59
TOM1L1-223	ENST00000576932	TOMM7	Q9P0U1	55 aa		5.13	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms