RNA–Protein interactions for RNA: ENST00000574060.1

RNF213-218, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-218ENST00000574060 CHCHD1Q96BP2 118 aaKnown RBP8.45□□□□□ -1.06
RNF213-218ENST00000574060 IGLV5-45A0A087WSX0 123 aa8.44□□□□□ -1.06
RNF213-218ENST00000574060 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
RNF213-218ENST00000574060 PMCHL1Q16048 86 aa8.44□□□□□ -1.06
RNF213-218ENST00000574060 PDZD11Q5EBL8 140 aa8.44□□□□□ -1.06
RNF213-218ENST00000574060 C10orf25Q5T742 122 aa8.44□□□□□ -1.06
RNF213-218ENST00000574060 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
RNF213-218ENST00000574060 Q8IZM0 81 aa8.44□□□□□ -1.06
RNF213-218ENST00000574060 LINC00469Q8N7U9 141 aa8.44□□□□□ -1.06
RNF213-218ENST00000574060 C6orf48Q9UBA6 75 aa8.44□□□□□ -1.06
RNF213-218ENST00000574060 TRBV30A0A0K0K1B3 111 aa8.43□□□□□ -1.06
RNF213-218ENST00000574060 ATP5LO75964 103 aa8.43□□□□□ -1.06
RNF213-218ENST00000574060 TRGC2P03986 189 aa8.43□□□□□ -1.06
RNF213-218ENST00000574060 TLX1NBP0CAT3 122 aa8.43□□□□□ -1.06
RNF213-218ENST00000574060 C7orf33Q8WU49 177 aa8.43□□□□□ -1.06
RNF213-218ENST00000574060 TOMM7Q9P0U1 55 aa8.43□□□□□ -1.06
RNF213-218ENST00000574060 SMIM1B2RUZ4 78 aa8.42□□□□□ -1.06
RNF213-218ENST00000574060 CKS1BP61024 79 aa8.42□□□□□ -1.06
RNF213-218ENST00000574060 C6orf226Q5I0X4 101 aa8.42□□□□□ -1.06
RNF213-218ENST00000574060 C2orf82Q6UX34 121 aa8.42□□□□□ -1.06
RNF213-218ENST00000574060 IGLC3P0DOY3 106 aa8.41□□□□□ -1.06
RNF213-218ENST00000574060 COLCA2A8K830 154 aa8.4□□□□□ -1.06
RNF213-218ENST00000574060 CXCL5P42830 114 aa8.4□□□□□ -1.06
RNF213-218ENST00000574060 NDUFA6P56556 154 aa8.4□□□□□ -1.06
RNF213-218ENST00000574060 Q6ZRP5 223 aa8.4□□□□□ -1.06
RNF213-218ENST00000574060 BAGE3Q86Y29 109 aa8.4□□□□□ -1.06
RNF213-218ENST00000574060 NDUFC2-KCTD14E9PQ53 114 aa8.39□□□□□ -1.07
RNF213-218ENST00000574060 H3BRM9 83 aa8.39□□□□□ -1.07
RNF213-218ENST00000574060 HSBP1O75506 76 aa8.39□□□□□ -1.07
RNF213-218ENST00000574060 F8VRH5 84 aa8.38□□□□□ -1.07
RNF213-218ENST00000574060 C9orf116Q5BN46 136 aaPredicted RBP8.38□□□□□ -1.07
RNF213-218ENST00000574060 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
RNF213-218ENST00000574060 A0A1W2PNN7 141 aa8.37□□□□□ -1.07
RNF213-218ENST00000574060 SPINK8P0C7L1 97 aa8.37□□□□□ -1.07
RNF213-218ENST00000574060 GAGE2EQ4V326 116 aa8.37□□□□□ -1.07
RNF213-218ENST00000574060 GAGE2DQ9UEU5 116 aa8.37□□□□□ -1.07
RNF213-218ENST00000574060 FLG2Q5D862 2391 aaPredicted RBP8.36□□□□□ -1.07
RNF213-218ENST00000574060 MYCBP2O75592 4640 aa8.36□□□□□ -1.07
RNF213-218ENST00000574060 ZNF22P17026 224 aaPredicted RBP8.36□□□□□ -1.07
RNF213-218ENST00000574060 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
RNF213-218ENST00000574060 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
RNF213-218ENST00000574060 SERF1AO75920 110 aa8.35□□□□□ -1.07
RNF213-218ENST00000574060 HNRNPA3P51991 378 aaKnown RBP8.35□□□□□ -1.07
RNF213-218ENST00000574060 PRR3P79522 188 aaKnown RBP8.35□□□□□ -1.07
RNF213-218ENST00000574060 FAM19A2Q8N3H0 131 aa8.35□□□□□ -1.07
RNF213-218ENST00000574060 CHTOPQ9Y3Y2 248 aaKnown RBP8.35□□□□□ -1.07
RNF213-218ENST00000574060 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.07
RNF213-218ENST00000574060 C11orf86A6NJI1 115 aa8.34□□□□□ -1.07
RNF213-218ENST00000574060 EIF4EBP3O60516 100 aaPredicted RBP8.34□□□□□ -1.07
RNF213-218ENST00000574060 SCO1O75880 301 aa8.34□□□□□ -1.07
RNF213-218ENST00000574060 LINC00310P59036 64 aa8.34□□□□□ -1.07
RNF213-218ENST00000574060 KRTAP29-1A8MX34 341 aaPredicted RBP8.33□□□□□ -1.08
RNF213-218ENST00000574060 FAM168BA1KXE4 195 aa8.32□□□□□ -1.08
RNF213-218ENST00000574060 LEPROTL1O95214 131 aa8.32□□□□□ -1.08
RNF213-218ENST00000574060 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
RNF213-218ENST00000574060 TMEM170BQ5T4T1 132 aa8.32□□□□□ -1.08
RNF213-218ENST00000574060 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
RNF213-218ENST00000574060 PKHD1L1Q86WI1 4243 aa8.32□□□□□ -1.08
RNF213-218ENST00000574060 PHF5AQ7RTV0 110 aaKnown RBP8.31□□□□□ -1.08
RNF213-218ENST00000574060 OXTP01178 125 aa8.3□□□□□ -1.08
RNF213-218ENST00000574060 M0QXV9 152 aa8.29□□□□□ -1.08
RNF213-218ENST00000574060 NUPR1O60356 82 aa8.29□□□□□ -1.08
RNF213-218ENST00000574060 SFTA2Q6UW10 78 aa8.29□□□□□ -1.08
RNF213-218ENST00000574060 KRTAP7-1Q8IUC3 87 aa8.29□□□□□ -1.08
RNF213-218ENST00000574060 KRTAP4-8Q9BYQ9 185 aa8.29□□□□□ -1.08
RNF213-218ENST00000574060 XAGE1AQ9HD64 81 aa8.29□□□□□ -1.08
RNF213-218ENST00000574060 HSPB8Q9UJY1 196 aa8.29□□□□□ -1.08
RNF213-218ENST00000574060 TMEM223A0PJW6 202 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 HIST1H2BKO60814 126 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 HIST1H2BJP06899 126 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 HIST1H2BOP23527 126 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 HIST1H2BBP33778 126 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 HIST1H2BDP58876 126 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 HIST1H2BCP62807 126 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 HIST2H2BEQ16778 126 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.28□□□□□ -1.08
RNF213-218ENST00000574060 HIST1H2BHQ93079 126 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 HIST1H2BNQ99877 126 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 HIST1H2BMQ99879 126 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 PSORS1C2Q9UIG4 136 aa8.28□□□□□ -1.08
RNF213-218ENST00000574060 DMBT1Q9UGM3 2413 aaPredicted RBP8.28□□□□□ -1.08
RNF213-218ENST00000574060 H0Y8G0 127 aa8.27□□□□□ -1.09
RNF213-218ENST00000574060 ODF1Q14990 250 aa8.27□□□□□ -1.09
RNF213-218ENST00000574060 FABP4P15090 132 aa8.26□□□□□ -1.09
RNF213-218ENST00000574060 SERTAD4-AS1Q5TG53 156 aa8.26□□□□□ -1.09
RNF213-218ENST00000574060 SPINK6Q6UWN8 80 aa8.26□□□□□ -1.09
RNF213-218ENST00000574060 LRP1Q07954 4544 aaKnown RBP8.25□□□□□ -1.09
RNF213-218ENST00000574060 PLNP26678 52 aa8.25□□□□□ -1.09
RNF213-218ENST00000574060 UBE2BP63146 152 aa8.25□□□□□ -1.09
RNF213-218ENST00000574060 COX17Q14061 63 aa8.25□□□□□ -1.09
RNF213-218ENST00000574060 ERG28Q9UKR5 140 aa8.25□□□□□ -1.09
RNF213-218ENST00000574060 FAT3Q8TDW7 4589 aa8.25□□□□□ -1.09
RNF213-218ENST00000574060 PFN2P35080 140 aa8.24□□□□□ -1.09
RNF213-218ENST00000574060 SRSF9Q13242 221 aaKnown RBP eCLIP8.24□□□□□ -1.09
RNF213-218ENST00000574060 C1orf137Q5JT78 98 aa8.24□□□□□ -1.09
RNF213-218ENST00000574060 ZNF625Q96I27 306 aaPredicted RBP8.24□□□□□ -1.09
RNF213-218ENST00000574060 TP73-AS1Q9UF72 201 aa8.24□□□□□ -1.09
RNF213-218ENST00000574060 PLA2G2DQ9UNK4 145 aa8.24□□□□□ -1.09
RNF213-218ENST00000574060 LBHQ53QV2 105 aaPredicted RBP8.23□□□□□ -1.09
RNF213-218ENST00000574060 KRTAP11-1Q8IUC1 163 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms