RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 TRAV12-1A0A0B4J245 112 aa8.71□□□□□ -1.02
RPAIN-213ENST00000573577 NDUFA1O15239 70 aa8.71□□□□□ -1.02
RPAIN-213ENST00000573577 PRSS2P07478 247 aa8.71□□□□□ -1.02
RPAIN-213ENST00000573577 SDIM1Q6ZPB5 146 aa8.71□□□□□ -1.02
RPAIN-213ENST00000573577 CHAC1Q9BUX1 264 aa8.71□□□□□ -1.02
RPAIN-213ENST00000573577 NUPR1O60356 82 aa8.7□□□□□ -1.02
RPAIN-213ENST00000573577 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
RPAIN-213ENST00000573577 CHTOPQ9Y3Y2 248 aaKnown RBP8.7□□□□□ -1.02
RPAIN-213ENST00000573577 RNF151Q2KHN1 245 aa8.69□□□□□ -1.02
RPAIN-213ENST00000573577 C6orf226Q5I0X4 101 aa8.69□□□□□ -1.02
RPAIN-213ENST00000573577 Q6ZRU5 148 aa8.69□□□□□ -1.02
RPAIN-213ENST00000573577 Q8IZM0 81 aa8.69□□□□□ -1.02
RPAIN-213ENST00000573577 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
RPAIN-213ENST00000573577 TOMM7Q9P0U1 55 aa8.69□□□□□ -1.02
RPAIN-213ENST00000573577 FABP4P15090 132 aa8.68□□□□□ -1.02
RPAIN-213ENST00000573577 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
RPAIN-213ENST00000573577 LINC00474Q9P2X8 69 aa8.68□□□□□ -1.02
RPAIN-213ENST00000573577 LOC107984640A0A0U1RRK4 108 aa8.67□□□□□ -1.02
RPAIN-213ENST00000573577 SMIM1B2RUZ4 78 aa8.67□□□□□ -1.02
RPAIN-213ENST00000573577 F8VRH5 84 aa8.67□□□□□ -1.02
RPAIN-213ENST00000573577 CXCL5P42830 114 aa8.67□□□□□ -1.02
RPAIN-213ENST00000573577 CKS1BP61024 79 aa8.67□□□□□ -1.02
RPAIN-213ENST00000573577 COA6Q5JTJ3 125 aaKnown RBP8.67□□□□□ -1.02
RPAIN-213ENST00000573577 TRBV30A0A0K0K1B3 111 aa8.66□□□□□ -1.02
RPAIN-213ENST00000573577 H0Y8G0 127 aa8.66□□□□□ -1.02
RPAIN-213ENST00000573577 SPINK8P0C7L1 97 aa8.66□□□□□ -1.02
RPAIN-213ENST00000573577 ZNF22P17026 224 aaPredicted RBP8.66□□□□□ -1.02
RPAIN-213ENST00000573577 TMEM170BQ5T4T1 132 aa8.66□□□□□ -1.02
RPAIN-213ENST00000573577 CIRBP-AS1Q8TBR5 109 aa8.66□□□□□ -1.02
RPAIN-213ENST00000573577 DPH3Q96FX2 82 aa8.66□□□□□ -1.02
RPAIN-213ENST00000573577 MAP1LC3CQ9BXW4 147 aa8.66□□□□□ -1.02
RPAIN-213ENST00000573577 VPS13BQ7Z7G8 4022 aa8.65□□□□□ -1.02
RPAIN-213ENST00000573577 C11orf86A6NJI1 115 aa8.65□□□□□ -1.02
RPAIN-213ENST00000573577 UNQ6190/PRO20217Q6UXQ8 127 aa8.65□□□□□ -1.02
RPAIN-213ENST00000573577 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
RPAIN-213ENST00000573577 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
RPAIN-213ENST00000573577 CIRBPQ14011 172 aaKnown RBP8.64□□□□□ -1.03
RPAIN-213ENST00000573577 C2orf82Q6UX34 121 aa8.64□□□□□ -1.03
RPAIN-213ENST00000573577 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.64□□□□□ -1.03
RPAIN-213ENST00000573577 PANO1I0J062 215 aa8.63□□□□□ -1.03
RPAIN-213ENST00000573577 INAFM2P0DMQ5 153 aa8.63□□□□□ -1.03
RPAIN-213ENST00000573577 RPL18AQ02543 176 aaKnown RBP8.63□□□□□ -1.03
RPAIN-213ENST00000573577 ODF1Q14990 250 aa8.63□□□□□ -1.03
RPAIN-213ENST00000573577 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
RPAIN-213ENST00000573577 SPACA4Q8TDM5 124 aa8.63□□□□□ -1.03
RPAIN-213ENST00000573577 C6orf48Q9UBA6 75 aa8.63□□□□□ -1.03
RPAIN-213ENST00000573577 A0A096LNI7 61 aa8.62□□□□□ -1.03
RPAIN-213ENST00000573577 IGLV5-39A0A0G2JS06 123 aa8.62□□□□□ -1.03
RPAIN-213ENST00000573577 TLX1NBP0CAT3 122 aa8.62□□□□□ -1.03
RPAIN-213ENST00000573577 CHTF8P0CG12 524 aa8.62□□□□□ -1.03
RPAIN-213ENST00000573577 PLNP26678 52 aa8.62□□□□□ -1.03
RPAIN-213ENST00000573577 PTTG1IPP53801 180 aa8.62□□□□□ -1.03
RPAIN-213ENST00000573577 GAGE2BQ13066 116 aa8.62□□□□□ -1.03
RPAIN-213ENST00000573577 MAJINQ3KP22 176 aa8.62□□□□□ -1.03
RPAIN-213ENST00000573577 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
RPAIN-213ENST00000573577 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
RPAIN-213ENST00000573577 A0A087WYN8 130 aa8.6□□□□□ -1.03
RPAIN-213ENST00000573577 DPM2O94777 84 aa8.6□□□□□ -1.03
RPAIN-213ENST00000573577 SFTA2Q6UW10 78 aa8.6□□□□□ -1.03
RPAIN-213ENST00000573577 TMEM223A0PJW6 202 aa8.59□□□□□ -1.03
RPAIN-213ENST00000573577 NDUFC2-KCTD14E9PQ53 114 aa8.59□□□□□ -1.03
RPAIN-213ENST00000573577 SYS1-DBNDD2H3BUS1 97 aa8.59□□□□□ -1.03
RPAIN-213ENST00000573577 S100A6P06703 90 aa8.59□□□□□ -1.03
RPAIN-213ENST00000573577 STPG4Q8N801 248 aa8.59□□□□□ -1.03
RPAIN-213ENST00000573577 IGKCP01834 107 aa8.58□□□□□ -1.04
RPAIN-213ENST00000573577 PET117Q6UWS5 81 aa8.58□□□□□ -1.04
RPAIN-213ENST00000573577 PLAC8Q9NZF1 115 aa8.58□□□□□ -1.04
RPAIN-213ENST00000573577 HERVK_113P61574 105 aa8.57□□□□□ -1.04
RPAIN-213ENST00000573577 C9orf116Q5BN46 136 aaPredicted RBP8.57□□□□□ -1.04
RPAIN-213ENST00000573577 Q6ZRP5 223 aa8.57□□□□□ -1.04
RPAIN-213ENST00000573577 S100A2P29034 98 aa8.56□□□□□ -1.04
RPAIN-213ENST00000573577 GAGE2EQ4V326 116 aa8.56□□□□□ -1.04
RPAIN-213ENST00000573577 PMCHL2Q9BQD1 86 aa8.56□□□□□ -1.04
RPAIN-213ENST00000573577 GAGE2DQ9UEU5 116 aa8.56□□□□□ -1.04
RPAIN-213ENST00000573577 C3orf79P0CE67 100 aa8.55□□□□□ -1.04
RPAIN-213ENST00000573577 KRTAP10-4P60372 401 aaPredicted RBP8.55□□□□□ -1.04
RPAIN-213ENST00000573577 KRTDAPP60985 99 aa8.55□□□□□ -1.04
RPAIN-213ENST00000573577 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
RPAIN-213ENST00000573577 C20orf202A1L168 122 aa8.54□□□□□ -1.04
RPAIN-213ENST00000573577 LINC01545Q5VT33 79 aa8.54□□□□□ -1.04
RPAIN-213ENST00000573577 C7orf33Q8WU49 177 aa8.54□□□□□ -1.04
RPAIN-213ENST00000573577 AKR1D1P51857 326 aa8.53□□□□□ -1.04
RPAIN-213ENST00000573577 RPL37AP61513 92 aaKnown RBP8.53□□□□□ -1.04
RPAIN-213ENST00000573577 COX17Q14061 63 aa8.53□□□□□ -1.04
RPAIN-213ENST00000573577 HIST3H2BBQ8N257 126 aa8.53□□□□□ -1.04
RPAIN-213ENST00000573577 PLEKHB2Q96CS7 222 aa8.53□□□□□ -1.04
RPAIN-213ENST00000573577 LEPROTO15243 131 aa8.52□□□□□ -1.05
RPAIN-213ENST00000573577 ZNF625Q96I27 306 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-213ENST00000573577 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
RPAIN-213ENST00000573577 HERV-K104P63124 156 aa8.51□□□□□ -1.05
RPAIN-213ENST00000573577 ERG28Q9UKR5 140 aa8.51□□□□□ -1.05
RPAIN-213ENST00000573577 FLG2Q5D862 2391 aaPredicted RBP8.51□□□□□ -1.05
RPAIN-213ENST00000573577 A0A1W2PNN7 141 aa8.5□□□□□ -1.05
RPAIN-213ENST00000573577 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
RPAIN-213ENST00000573577 PFN2P35080 140 aa8.5□□□□□ -1.05
RPAIN-213ENST00000573577 C21orf62-AS1Q17RA5 79 aa8.5□□□□□ -1.05
RPAIN-213ENST00000573577 HIST1H2BLQ99880 126 aa8.5□□□□□ -1.05
RPAIN-213ENST00000573577 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
RPAIN-213ENST00000573577 J3QQQ9 107 aa8.49□□□□□ -1.05
RPAIN-213ENST00000573577 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms