RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 C6orf226Q5I0X4 101 aa11.2□□□□□ -0.62
POLR2A-201ENST00000572844 SCGB1A1P11684 91 aa11.2□□□□□ -0.62
POLR2A-201ENST00000572844 LELP1Q5T871 98 aa11.2□□□□□ -0.62
POLR2A-201ENST00000572844 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
POLR2A-201ENST00000572844 C2orf82Q6UX34 121 aa11.19□□□□□ -0.62
POLR2A-201ENST00000572844 LINC00269Q8N2A0 174 aa11.19□□□□□ -0.62
POLR2A-201ENST00000572844 ATRQ13535 2644 aa11.19□□□□□ -0.62
POLR2A-201ENST00000572844 NTN5Q8WTR8 489 aaPredicted RBP11.18□□□□□ -0.62
POLR2A-201ENST00000572844 CDIP1Q9H305 208 aa11.18□□□□□ -0.62
POLR2A-201ENST00000572844 CRPP02741 224 aa11.18□□□□□ -0.62
POLR2A-201ENST00000572844 RPL28P46779 137 aaKnown RBP11.18□□□□□ -0.62
POLR2A-201ENST00000572844 CCL18P55774 89 aa11.18□□□□□ -0.62
POLR2A-201ENST00000572844 REG3AQ06141 175 aa11.18□□□□□ -0.62
POLR2A-201ENST00000572844 CXCL5P42830 114 aa11.17□□□□□ -0.62
POLR2A-201ENST00000572844 IGKV2-28A0A075B6P5 120 aa11.16□□□□□ -0.62
POLR2A-201ENST00000572844 IGKV2D-28P01615 120 aa11.16□□□□□ -0.62
POLR2A-201ENST00000572844 EGFEM1PQ0D2K5 195 aa11.16□□□□□ -0.62
POLR2A-201ENST00000572844 CLPSL2Q6UWE3 100 aa11.16□□□□□ -0.62
POLR2A-201ENST00000572844 CHCHD10Q8WYQ3 142 aaPredicted RBP11.16□□□□□ -0.62
POLR2A-201ENST00000572844 ANGP03950 147 aaKnown RBP11.16□□□□□ -0.62
POLR2A-201ENST00000572844 TRACP01848 142 aa11.15□□□□□ -0.62
POLR2A-201ENST00000572844 UBE2WQ96B02 151 aa11.15□□□□□ -0.62
POLR2A-201ENST00000572844 NBEAL2Q6ZNJ1 2754 aa11.15□□□□□ -0.62
POLR2A-201ENST00000572844 KIAA0087Q14695 138 aa11.15□□□□□ -0.63
POLR2A-201ENST00000572844 LINC00337Q8N6G1 96 aa11.15□□□□□ -0.63
POLR2A-201ENST00000572844 H3BNG1 76 aa11.14□□□□□ -0.63
POLR2A-201ENST00000572844 PFN2P35080 140 aa11.14□□□□□ -0.63
POLR2A-201ENST00000572844 KRTAP10-11P60412 298 aa11.14□□□□□ -0.63
POLR2A-201ENST00000572844 HTN3P15516 51 aa11.13□□□□□ -0.63
POLR2A-201ENST00000572844 COX17Q14061 63 aa11.13□□□□□ -0.63
POLR2A-201ENST00000572844 KRTAP24-1Q3LI83 254 aa11.13□□□□□ -0.63
POLR2A-201ENST00000572844 OXLD1Q5BKU9 147 aa11.13□□□□□ -0.63
POLR2A-201ENST00000572844 DEFB121Q5J5C9 76 aa11.13□□□□□ -0.63
POLR2A-201ENST00000572844 CKS1BP61024 79 aa11.12□□□□□ -0.63
POLR2A-201ENST00000572844 PRR34Q9NV39 138 aa11.12□□□□□ -0.63
POLR2A-201ENST00000572844 CFAP161Q6P656 301 aa11.12□□□□□ -0.63
POLR2A-201ENST00000572844 Q8N3U1 123 aa11.12□□□□□ -0.63
POLR2A-201ENST00000572844 TEX49A0A1B0GTD5 131 aa11.11□□□□□ -0.63
POLR2A-201ENST00000572844 MALP21145 153 aa11.1□□□□□ -0.63
POLR2A-201ENST00000572844 C11orf68Q9H3H3 251 aaKnown RBP11.1□□□□□ -0.63
POLR2A-201ENST00000572844 KLK5Q9Y337 293 aaPredicted RBP11.1□□□□□ -0.63
POLR2A-201ENST00000572844 LYPD5Q6UWN5 251 aa11.1□□□□□ -0.63
POLR2A-201ENST00000572844 H0YGX0 51 aa11.08□□□□□ -0.63
POLR2A-201ENST00000572844 IGLV10-54A0A075B6I4 117 aa11.08□□□□□ -0.64
POLR2A-201ENST00000572844 C3orf56Q8N813 242 aa11.08□□□□□ -0.64
POLR2A-201ENST00000572844 MUC7Q8TAX7 377 aa11.08□□□□□ -0.64
POLR2A-201ENST00000572844 SMIM11BQ8TCY0 68 aa11.08□□□□□ -0.64
POLR2A-201ENST00000572844 NDUFC2O95298 119 aa11.07□□□□□ -0.64
POLR2A-201ENST00000572844 FAM218AQ96MZ4 157 aa11.07□□□□□ -0.64
POLR2A-201ENST00000572844 TRAV8-4A0A0B4J246 113 aa11.06□□□□□ -0.64
POLR2A-201ENST00000572844 XGP55808 180 aa11.06□□□□□ -0.64
POLR2A-201ENST00000572844 RETNQ9HD89 108 aa11.05□□□□□ -0.64
POLR2A-201ENST00000572844 FAM240AA0A1B0GVK7 77 aa11.05□□□□□ -0.64
POLR2A-201ENST00000572844 ENHOQ6UWT2 76 aa11.05□□□□□ -0.64
POLR2A-201ENST00000572844 KLK12Q9UKR0 248 aa11.05□□□□□ -0.64
POLR2A-201ENST00000572844 TRRAPQ9Y4A5 3859 aa11.05□□□□□ -0.64
POLR2A-201ENST00000572844 MT-ATP8P03928 68 aa11.04□□□□□ -0.64
POLR2A-201ENST00000572844 BAALC-AS2P0C853 105 aa11.04□□□□□ -0.64
POLR2A-201ENST00000572844 KPRPQ5T749 579 aaPredicted RBP11.04□□□□□ -0.64
POLR2A-201ENST00000572844 MAST4O15021 2626 aa11.02□□□□□ -0.64
POLR2A-201ENST00000572844 A0A0J9YWU9 116 aa11.02□□□□□ -0.64
POLR2A-201ENST00000572844 SPAG11BQ08648 103 aa11.02□□□□□ -0.64
POLR2A-201ENST00000572844 FBN1P35555 2871 aaKnown RBP11.02□□□□□ -0.64
POLR2A-201ENST00000572844 OR13C6PQ8NH95 151 aa11.01□□□□□ -0.65
POLR2A-201ENST00000572844 Q6ZTC4 211 aa11□□□□□ -0.65
POLR2A-201ENST00000572844 GVQW2A0A096LPI5 108 aaPredicted RBP11□□□□□ -0.65
POLR2A-201ENST00000572844 C22orf24Q9Y442 160 aa11□□□□□ -0.65
POLR2A-201ENST00000572844 DNAL4O96015 105 aa10.98□□□□□ -0.65
POLR2A-201ENST00000572844 ACYP1P07311 99 aa10.98□□□□□ -0.65
POLR2A-201ENST00000572844 TMEM126AQ9H061 195 aa10.98□□□□□ -0.65
POLR2A-201ENST00000572844 A0A087WYN8 130 aa10.97□□□□□ -0.65
POLR2A-201ENST00000572844 UNQ6190/PRO20217Q6UXQ8 127 aa10.97□□□□□ -0.65
POLR2A-201ENST00000572844 A0A1B0GX51 115 aa10.97□□□□□ -0.65
POLR2A-201ENST00000572844 NANOS2P60321 138 aaKnown RBP10.97□□□□□ -0.65
POLR2A-201ENST00000572844 C9orf116Q5BN46 136 aaPredicted RBP10.97□□□□□ -0.65
POLR2A-201ENST00000572844 WFDC10BQ8IUB3 73 aa10.97□□□□□ -0.65
POLR2A-201ENST00000572844 C10orf25Q5T742 122 aa10.96□□□□□ -0.65
POLR2A-201ENST00000572844 C6orf223Q8N319 242 aa10.96□□□□□ -0.65
POLR2A-201ENST00000572844 Q9HAA7 133 aa10.96□□□□□ -0.65
POLR2A-201ENST00000572844 STAB1Q9NY15 2570 aa10.96□□□□□ -0.66
POLR2A-201ENST00000572844 INAFM2P0DMQ5 153 aa10.95□□□□□ -0.66
POLR2A-201ENST00000572844 KRTAP26-1Q6PEX3 210 aa10.94□□□□□ -0.66
POLR2A-201ENST00000572844 C11orf45Q8TAV5 145 aa10.94□□□□□ -0.66
POLR2A-201ENST00000572844 SNCGO76070 127 aa10.94□□□□□ -0.66
POLR2A-201ENST00000572844 ESRGQ1W209 222 aa10.94□□□□□ -0.66
POLR2A-201ENST00000572844 DEFB131BA0A096LNP1 70 aa10.93□□□□□ -0.66
POLR2A-201ENST00000572844 LECT2O14960 151 aa10.93□□□□□ -0.66
POLR2A-201ENST00000572844 LINC00167Q96N53 147 aa10.93□□□□□ -0.66
POLR2A-201ENST00000572844 PRR3P79522 188 aaKnown RBP10.93□□□□□ -0.66
POLR2A-201ENST00000572844 Q6Q795 121 aa10.93□□□□□ -0.66
POLR2A-201ENST00000572844 LINC01556Q5JQF7 62 aa10.92□□□□□ -0.66
POLR2A-201ENST00000572844 C15orf53Q8NAA6 179 aa10.92□□□□□ -0.66
POLR2A-201ENST00000572844 OBSCN-AS1Q96MR7 158 aa10.91□□□□□ -0.66
POLR2A-201ENST00000572844 C6orf48Q9UBA6 75 aa10.91□□□□□ -0.66
POLR2A-201ENST00000572844 CMYA5Q8N3K9 4069 aa10.9□□□□□ -0.66
POLR2A-201ENST00000572844 Q8NDZ9 215 aa10.9□□□□□ -0.66
POLR2A-201ENST00000572844 LINC00526Q96FQ7 95 aa10.9□□□□□ -0.66
POLR2A-201ENST00000572844 COL6A5A8TX70 2615 aa10.89□□□□□ -0.67
POLR2A-201ENST00000572844 DNAH3Q8TD57 4116 aa10.89□□□□□ -0.67
POLR2A-201ENST00000572844 F8WDY8 70 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms