RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ANKRD29Q8N6D5 301 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 OR1L8Q8NGR8 309 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 UBE2WQ96B02 151 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 LINC01587Q99440 93 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 NAA38Q9BRA0 125 aaKnown RBP3.57□□□□□ -1.84
SF3B3-214ENST00000572365 F11RQ9Y624 299 aaKnown RBP3.57□□□□□ -1.84
SF3B3-214ENST00000572365 V9GYY9 64 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 TRBV7-3A0A075B6L6 115 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 IGHV3-21A0A0B4J1V1 117 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 IGKV1-6A0A0C4DH72 117 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 KNCNA6PVL3 124 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 INS-IGF2F8WCM5 200 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 H7C1H1 209 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 NDUFC2O95298 119 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 LTAP01374 205 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 UBE2D1P51668 147 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 HERVK_113P63121 156 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 MRPS36P82909 103 aaKnown RBP3.56□□□□□ -1.84
SF3B3-214ENST00000572365 ERHP84090 104 aaKnown RBP3.56□□□□□ -1.84
SF3B3-214ENST00000572365 C2orf83Q53S99 150 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 GDF5OSQ5U4N7 250 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 C10orf113Q5VZT2 155 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 FAM104BQ5XKR9 115 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 LINC00173Q6ZV60 143 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 LINC00643Q86TS7 51 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 PGLYRP4Q96LB8 373 aa3.56□□□□□ -1.84
SF3B3-214ENST00000572365 TRAV8-1A0A0A6YYK1 113 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 TRAV4A0A0B4J268 109 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 IGHV3-66A0A0C4DH42 116 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 TRBV10-2A0A0K0K1G8 114 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 FAM223BA6NKX1 122 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 E7EUB6 86 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 H3BVH4 76 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 PPP1R17O96001 155 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 IGHV3-48P01763 117 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 IGLC6P0CF74 106 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 RPL7P18124 248 aaKnown RBP3.55□□□□□ -1.84
SF3B3-214ENST00000572365 CKS2P33552 79 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 DEFB131AP59861 70 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 SCGB1D4Q6XE38 83 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 MIR17HGQ75NE6 70 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 PCP2Q8IVA1 136 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 FAM223AQ8IWN6 122 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 SRSF12Q8WXF0 261 aaKnown RBP3.55□□□□□ -1.84
SF3B3-214ENST00000572365 BAALCQ8WXS3 180 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 PLEKHB2Q96CS7 222 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 CARD19Q96LW7 228 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 OTORQ9NRC9 128 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 C21orf62Q9NYP8 219 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 PRO1854Q9UHT4 67 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 HHLA3Q9XRX5 114 aa3.55□□□□□ -1.84
SF3B3-214ENST00000572365 A0A0B4J2C4 111 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 PGPA6NDG6 321 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 F8VRH5 84 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 PRM2P04554 102 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 DNAH10OSP0CZ25 163 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 MIFP14174 115 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 IFI27P40305 119 aaPredicted RBP3.54□□□□□ -1.84
SF3B3-214ENST00000572365 FXYD7P58549 80 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 SEC61GP60059 68 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 EIF4EBP1Q13541 118 aaPredicted RBP3.54□□□□□ -1.84
SF3B3-214ENST00000572365 ORMDL2Q53FV1 153 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 C14orf178Q8N769 122 aaPredicted RBP3.54□□□□□ -1.84
SF3B3-214ENST00000572365 TMEM75Q8N9X5 138 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 TMEM14BQ9NUH8 114 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 LINC00588Q9Y4M8 146 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 TIMM8BQ9Y5J9 83 aaPredicted RBP3.54□□□□□ -1.84
SF3B3-214ENST00000572365 KIF25-AS1Q9Y6Z4 181 aa3.54□□□□□ -1.84
SF3B3-214ENST00000572365 TRAV13-1A0A0B4J241 112 aa3.53□□□□□ -1.84
SF3B3-214ENST00000572365 TRBV30A0A0K0K1B3 111 aa3.53□□□□□ -1.84
SF3B3-214ENST00000572365 K7ERJ3 54 aa3.53□□□□□ -1.84
SF3B3-214ENST00000572365 BCE1O60756 84 aa3.53□□□□□ -1.84
SF3B3-214ENST00000572365 GNG5P63218 68 aa3.53□□□□□ -1.84
SF3B3-214ENST00000572365 PRCDQ00LT1 54 aa3.53□□□□□ -1.84
SF3B3-214ENST00000572365 VKORC1L1Q8N0U8 176 aa3.53□□□□□ -1.84
SF3B3-214ENST00000572365 Q8N8P6 123 aa3.53□□□□□ -1.84
SF3B3-214ENST00000572365 ZC2HC1AQ96GY0 325 aa3.53□□□□□ -1.84
SF3B3-214ENST00000572365 TMEM14CQ9P0S9 112 aa3.53□□□□□ -1.84
SF3B3-214ENST00000572365 XCL2Q9UBD3 114 aa3.53□□□□□ -1.84
SF3B3-214ENST00000572365 TNXBP22105 4242 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 TINCRA0A1B0GVN0 87 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 D6R8Y8 96 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 TCL1BO95988 128 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 TCRAP04437 139 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 ATP5EP56381 51 aaPredicted RBP3.52□□□□□ -1.85
SF3B3-214ENST00000572365 ZNF56Q15929 161 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 C6orf226Q5I0X4 101 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 S100A7L2Q5SY68 101 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 FAM222AQ5U5X8 452 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 GOLT1AQ6ZVE7 132 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 EEF1AKMT3Q96AZ1 226 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 DPH3Q96FX2 82 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 FAM167A-AS1Q96KT0 104 aa3.52□□□□□ -1.85
SF3B3-214ENST00000572365 A0A096LNJ9 63 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 FAM236AA0A1B0GUQ0 79 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 FAM236BA0A1B0GV22 79 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 KRTAP1-4P0C5Y4 121 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 SPART-AS1P0CW21 52 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 PYYP10082 97 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms