RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TINCRA0A1B0GVN0 87 aa8.69□□□□□ -1.02
HERPUD1-218ENST00000569569 PRSS2P07478 247 aa8.69□□□□□ -1.02
HERPUD1-218ENST00000569569 RPL18AQ02543 176 aaKnown RBP8.69□□□□□ -1.02
HERPUD1-218ENST00000569569 PACRGQ96M98 296 aaPredicted RBP8.69□□□□□ -1.02
HERPUD1-218ENST00000569569 C6orf48Q9UBA6 75 aa8.69□□□□□ -1.02
HERPUD1-218ENST00000569569 MYCBP2O75592 4640 aa8.68□□□□□ -1.02
HERPUD1-218ENST00000569569 TRBV30A0A0K0K1B3 111 aa8.68□□□□□ -1.02
HERPUD1-218ENST00000569569 HBDP02042 147 aa8.68□□□□□ -1.02
HERPUD1-218ENST00000569569 TLX1NBP0CAT3 122 aa8.68□□□□□ -1.02
HERPUD1-218ENST00000569569 C6orf226Q5I0X4 101 aa8.68□□□□□ -1.02
HERPUD1-218ENST00000569569 TOMM7Q9P0U1 55 aa8.68□□□□□ -1.02
HERPUD1-218ENST00000569569 GHRHP01286 108 aa8.67□□□□□ -1.02
HERPUD1-218ENST00000569569 C2orf82Q6UX34 121 aa8.67□□□□□ -1.02
HERPUD1-218ENST00000569569 Q8IZM0 81 aa8.67□□□□□ -1.02
HERPUD1-218ENST00000569569 LINC00469Q8N7U9 141 aa8.67□□□□□ -1.02
HERPUD1-218ENST00000569569 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
HERPUD1-218ENST00000569569 CKS1BP61024 79 aa8.66□□□□□ -1.02
HERPUD1-218ENST00000569569 PMCHL1Q16048 86 aa8.66□□□□□ -1.02
HERPUD1-218ENST00000569569 DMBT1Q9UGM3 2413 aaPredicted RBP8.66□□□□□ -1.02
HERPUD1-218ENST00000569569 A0A1W2PNN7 141 aa8.65□□□□□ -1.02
HERPUD1-218ENST00000569569 ATP5LO75964 103 aa8.65□□□□□ -1.02
HERPUD1-218ENST00000569569 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.02
HERPUD1-218ENST00000569569 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.02
HERPUD1-218ENST00000569569 Q6ZRP5 223 aa8.65□□□□□ -1.02
HERPUD1-218ENST00000569569 CHCHD1Q96BP2 118 aaKnown RBP8.65□□□□□ -1.02
HERPUD1-218ENST00000569569 KRTAP29-1A8MX34 341 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-218ENST00000569569 HNRNPA3P51991 378 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-218ENST00000569569 NDUFA6P56556 154 aa8.64□□□□□ -1.03
HERPUD1-218ENST00000569569 PKHD1L1Q86WI1 4243 aa8.64□□□□□ -1.03
HERPUD1-218ENST00000569569 SMIM1B2RUZ4 78 aa8.63□□□□□ -1.03
HERPUD1-218ENST00000569569 NDUFC2-KCTD14E9PQ53 114 aa8.63□□□□□ -1.03
HERPUD1-218ENST00000569569 TRGC2P03986 189 aa8.63□□□□□ -1.03
HERPUD1-218ENST00000569569 IGLC3P0DOY3 106 aa8.63□□□□□ -1.03
HERPUD1-218ENST00000569569 CXCL5P42830 114 aa8.63□□□□□ -1.03
HERPUD1-218ENST00000569569 GAGE2EQ4V326 116 aa8.63□□□□□ -1.03
HERPUD1-218ENST00000569569 GAGE2DQ9UEU5 116 aa8.63□□□□□ -1.03
HERPUD1-218ENST00000569569 H3BRM9 83 aa8.62□□□□□ -1.03
HERPUD1-218ENST00000569569 F8VRH5 84 aa8.61□□□□□ -1.03
HERPUD1-218ENST00000569569 OXTP01178 125 aa8.61□□□□□ -1.03
HERPUD1-218ENST00000569569 BAGE3Q86Y29 109 aa8.61□□□□□ -1.03
HERPUD1-218ENST00000569569 COX7B2Q8TF08 81 aa8.61□□□□□ -1.03
HERPUD1-218ENST00000569569 LRP1Q07954 4544 aaKnown RBP8.6□□□□□ -1.03
HERPUD1-218ENST00000569569 COLCA2A8K830 154 aa8.6□□□□□ -1.03
HERPUD1-218ENST00000569569 SPINK8P0C7L1 97 aa8.6□□□□□ -1.03
HERPUD1-218ENST00000569569 PRR3P79522 188 aaKnown RBP8.6□□□□□ -1.03
HERPUD1-218ENST00000569569 HSBP1O75506 76 aa8.59□□□□□ -1.03
HERPUD1-218ENST00000569569 FAT3Q8TDW7 4589 aa8.58□□□□□ -1.04
HERPUD1-218ENST00000569569 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
HERPUD1-218ENST00000569569 ZNF22P17026 224 aaPredicted RBP8.58□□□□□ -1.04
HERPUD1-218ENST00000569569 PHF5AQ7RTV0 110 aaKnown RBP8.58□□□□□ -1.04
HERPUD1-218ENST00000569569 IFI27L1Q96BM0 104 aa8.58□□□□□ -1.04
HERPUD1-218ENST00000569569 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
HERPUD1-218ENST00000569569 FAM19A2Q8N3H0 131 aa8.57□□□□□ -1.04
HERPUD1-218ENST00000569569 CHTOPQ9Y3Y2 248 aaKnown RBP8.57□□□□□ -1.04
HERPUD1-218ENST00000569569 TRAV12-1A0A0B4J245 112 aa8.56□□□□□ -1.04
HERPUD1-218ENST00000569569 IGLV5-39A0A0G2JS06 123 aa8.56□□□□□ -1.04
HERPUD1-218ENST00000569569 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
HERPUD1-218ENST00000569569 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-218ENST00000569569 FAM19A5Q7Z5A7 132 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-218ENST00000569569 TMEM170BQ5T4T1 132 aa8.55□□□□□ -1.04
HERPUD1-218ENST00000569569 PSORS1C2Q9UIG4 136 aa8.55□□□□□ -1.04
HERPUD1-218ENST00000569569 SERF1AO75920 110 aa8.54□□□□□ -1.04
HERPUD1-218ENST00000569569 SPINK6Q6UWN8 80 aa8.54□□□□□ -1.04
HERPUD1-218ENST00000569569 KRTAP7-1Q8IUC3 87 aa8.54□□□□□ -1.04
HERPUD1-218ENST00000569569 KRTAP9-2Q9BYQ4 174 aa8.54□□□□□ -1.04
HERPUD1-218ENST00000569569 M0QXV9 152 aa8.53□□□□□ -1.04
HERPUD1-218ENST00000569569 LEPROTL1O95214 131 aa8.53□□□□□ -1.04
HERPUD1-218ENST00000569569 LINC00310P59036 64 aa8.53□□□□□ -1.04
HERPUD1-218ENST00000569569 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
HERPUD1-218ENST00000569569 HERC1Q15751 4861 aa8.53□□□□□ -1.04
HERPUD1-218ENST00000569569 SCO1O75880 301 aa8.52□□□□□ -1.05
HERPUD1-218ENST00000569569 SRSF9Q13242 221 aaKnown RBP eCLIP8.52□□□□□ -1.05
HERPUD1-218ENST00000569569 NUPR1O60356 82 aa8.51□□□□□ -1.05
HERPUD1-218ENST00000569569 C1orf137Q5JT78 98 aa8.51□□□□□ -1.05
HERPUD1-218ENST00000569569 KRTAP9-6A0A140TA67 174 aa8.5□□□□□ -1.05
HERPUD1-218ENST00000569569 UBE2BP63146 152 aa8.5□□□□□ -1.05
HERPUD1-218ENST00000569569 SERTAD4-AS1Q5TG53 156 aa8.5□□□□□ -1.05
HERPUD1-218ENST00000569569 SFTA2Q6UW10 78 aa8.5□□□□□ -1.05
HERPUD1-218ENST00000569569 C22orf24Q9Y442 160 aa8.5□□□□□ -1.05
HERPUD1-218ENST00000569569 TMEM223A0PJW6 202 aa8.49□□□□□ -1.05
HERPUD1-218ENST00000569569 ODF1Q14990 250 aa8.49□□□□□ -1.05
HERPUD1-218ENST00000569569 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
HERPUD1-218ENST00000569569 HSPB8Q9UJY1 196 aa8.49□□□□□ -1.05
HERPUD1-218ENST00000569569 H0Y8G0 127 aa8.48□□□□□ -1.05
HERPUD1-218ENST00000569569 FABP4P15090 132 aa8.48□□□□□ -1.05
HERPUD1-218ENST00000569569 PFN2P35080 140 aa8.48□□□□□ -1.05
HERPUD1-218ENST00000569569 COX17Q14061 63 aa8.48□□□□□ -1.05
HERPUD1-218ENST00000569569 LBHQ53QV2 105 aaPredicted RBP8.48□□□□□ -1.05
HERPUD1-218ENST00000569569 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
HERPUD1-218ENST00000569569 PLA2G2DQ9UNK4 145 aa8.48□□□□□ -1.05
HERPUD1-218ENST00000569569 IGLV7-43P04211 117 aa8.47□□□□□ -1.05
HERPUD1-218ENST00000569569 REG3GQ6UW15 175 aa8.47□□□□□ -1.05
HERPUD1-218ENST00000569569 ERG28Q9UKR5 140 aa8.47□□□□□ -1.05
HERPUD1-218ENST00000569569 HIST1H2BKO60814 126 aa8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 HIST1H2BJP06899 126 aa8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 HIST1H2BOP23527 126 aa8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 HIST1H2BBP33778 126 aa8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 HIST1H2BDP58876 126 aa8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 HIST1H2BCP62807 126 aa8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 HIST2H2BEQ16778 126 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms