RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 KRTAP7-1Q8IUC3 87 aa10.29□□□□□ -0.76
EDC3-216ENST00000569561 CST9LQ9H4G1 147 aa10.29□□□□□ -0.76
EDC3-216ENST00000569561 TINCRA0A1B0GVN0 87 aa10.28□□□□□ -0.76
EDC3-216ENST00000569561 FAM168BA1KXE4 195 aa10.27□□□□□ -0.77
EDC3-216ENST00000569561 SMIM1B2RUZ4 78 aa10.27□□□□□ -0.77
EDC3-216ENST00000569561 SRSF9Q13242 221 aaKnown RBP eCLIP10.27□□□□□ -0.77
EDC3-216ENST00000569561 PHF5AQ7RTV0 110 aaKnown RBP10.27□□□□□ -0.77
EDC3-216ENST00000569561 GEMIN7Q9H840 131 aaKnown RBP10.27□□□□□ -0.77
EDC3-216ENST00000569561 SMCO4Q9NRQ5 59 aa10.27□□□□□ -0.77
EDC3-216ENST00000569561 NDUFC2-KCTD14E9PQ53 114 aa10.26□□□□□ -0.77
EDC3-216ENST00000569561 PMVKQ15126 192 aa10.26□□□□□ -0.77
EDC3-216ENST00000569561 LINC00614P0C842 121 aa10.25□□□□□ -0.77
EDC3-216ENST00000569561 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
EDC3-216ENST00000569561 C9orf129Q5T035 196 aaKnown RBP10.25□□□□□ -0.77
EDC3-216ENST00000569561 LINC00469Q8N7U9 141 aa10.25□□□□□ -0.77
EDC3-216ENST00000569561 PACRGQ96M98 296 aaPredicted RBP10.25□□□□□ -0.77
EDC3-216ENST00000569561 TOMM7Q9P0U1 55 aa10.25□□□□□ -0.77
EDC3-216ENST00000569561 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
EDC3-216ENST00000569561 PRSS2P07478 247 aa10.24□□□□□ -0.77
EDC3-216ENST00000569561 PDZD11Q5EBL8 140 aa10.24□□□□□ -0.77
EDC3-216ENST00000569561 KRTAP11-1Q8IUC1 163 aa10.24□□□□□ -0.77
EDC3-216ENST00000569561 PSORS1C2Q9UIG4 136 aa10.24□□□□□ -0.77
EDC3-216ENST00000569561 C6orf226Q5I0X4 101 aa10.23□□□□□ -0.77
EDC3-216ENST00000569561 SPINK6Q6UWN8 80 aa10.23□□□□□ -0.77
EDC3-216ENST00000569561 HBDP02042 147 aa10.22□□□□□ -0.77
EDC3-216ENST00000569561 IGLC3P0DOY3 106 aa10.22□□□□□ -0.77
EDC3-216ENST00000569561 CXCL5P42830 114 aa10.22□□□□□ -0.77
EDC3-216ENST00000569561 CKS1BP61024 79 aa10.22□□□□□ -0.77
EDC3-216ENST00000569561 PMCHL1Q16048 86 aa10.22□□□□□ -0.77
EDC3-216ENST00000569561 F8VRH5 84 aa10.21□□□□□ -0.77
EDC3-216ENST00000569561 FAM19A5Q7Z5A7 132 aaPredicted RBP10.21□□□□□ -0.77
EDC3-216ENST00000569561 CBLN2Q8IUK8 224 aa10.21□□□□□ -0.77
EDC3-216ENST00000569561 LINC01600Q96MT4 127 aa10.2□□□□□ -0.78
EDC3-216ENST00000569561 IGLV5-39A0A0G2JS06 123 aa10.19□□□□□ -0.78
EDC3-216ENST00000569561 SPINK8P0C7L1 97 aa10.19□□□□□ -0.78
EDC3-216ENST00000569561 RAB5BP61020 215 aa10.19□□□□□ -0.78
EDC3-216ENST00000569561 COX7B2Q8TF08 81 aa10.19□□□□□ -0.78
EDC3-216ENST00000569561 M0QXV9 152 aa10.18□□□□□ -0.78
EDC3-216ENST00000569561 ZNF22P17026 224 aaPredicted RBP10.18□□□□□ -0.78
EDC3-216ENST00000569561 SERTAD4-AS1Q5TG53 156 aa10.18□□□□□ -0.78
EDC3-216ENST00000569561 ODF1Q14990 250 aa10.17□□□□□ -0.78
EDC3-216ENST00000569561 SLC7A5P1Q8MH63 180 aa10.17□□□□□ -0.78
EDC3-216ENST00000569561 ATP5LO75964 103 aa10.16□□□□□ -0.78
EDC3-216ENST00000569561 C1orf137Q5JT78 98 aa10.16□□□□□ -0.78
EDC3-216ENST00000569561 CHCHD1Q96BP2 118 aaKnown RBP10.16□□□□□ -0.78
EDC3-216ENST00000569561 XAGE1AQ9HD64 81 aa10.15□□□□□ -0.78
EDC3-216ENST00000569561 C11orf86A6NJI1 115 aa10.14□□□□□ -0.79
EDC3-216ENST00000569561 H3BRM9 83 aa10.14□□□□□ -0.79
EDC3-216ENST00000569561 IGLV7-43P04211 117 aa10.14□□□□□ -0.79
EDC3-216ENST00000569561 KRTAP10-8P60410 259 aa10.14□□□□□ -0.79
EDC3-216ENST00000569561 REG3GQ6UW15 175 aa10.13□□□□□ -0.79
EDC3-216ENST00000569561 NDUFA6P56556 154 aa10.12□□□□□ -0.79
EDC3-216ENST00000569561 BAGE3Q86Y29 109 aa10.12□□□□□ -0.79
EDC3-216ENST00000569561 C22orf24Q9Y442 160 aa10.12□□□□□ -0.79
EDC3-216ENST00000569561 TRGC2P03986 189 aa10.11□□□□□ -0.79
EDC3-216ENST00000569561 LINC00310P59036 64 aa10.11□□□□□ -0.79
EDC3-216ENST00000569561 TP73-AS1Q9UF72 201 aa10.11□□□□□ -0.79
EDC3-216ENST00000569561 TRAV12-1A0A0B4J245 112 aa10.1□□□□□ -0.79
EDC3-216ENST00000569561 PLA2G2DQ9UNK4 145 aa10.1□□□□□ -0.79
EDC3-216ENST00000569561 UBE2BP63146 152 aa10.09□□□□□ -0.79
EDC3-216ENST00000569561 IFI27L1Q96BM0 104 aa10.09□□□□□ -0.79
EDC3-216ENST00000569561 COLCA2A8K830 154 aa10.08□□□□□ -0.8
EDC3-216ENST00000569561 CHTOPQ9Y3Y2 248 aaKnown RBP10.08□□□□□ -0.8
EDC3-216ENST00000569561 IGLV5-37A0A075B6J1 123 aa10.07□□□□□ -0.8
EDC3-216ENST00000569561 FAM19A2Q8N3H0 131 aa10.07□□□□□ -0.8
EDC3-216ENST00000569561 H0Y9J4 135 aa10.06□□□□□ -0.8
EDC3-216ENST00000569561 TMEM170BQ5T4T1 132 aa10.06□□□□□ -0.8
EDC3-216ENST00000569561 MRPL55Q7Z7F7 128 aaKnown RBP10.06□□□□□ -0.8
EDC3-216ENST00000569561 DIRC1Q969H9 104 aa10.06□□□□□ -0.8
EDC3-216ENST00000569561 ZNF625Q96I27 306 aaPredicted RBP10.06□□□□□ -0.8
EDC3-216ENST00000569561 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
EDC3-216ENST00000569561 HSBP1O75506 76 aa10.05□□□□□ -0.8
EDC3-216ENST00000569561 LBHQ53QV2 105 aaPredicted RBP10.05□□□□□ -0.8
EDC3-216ENST00000569561 SERF1AO75920 110 aa10.04□□□□□ -0.8
EDC3-216ENST00000569561 KRTAP1-4P0C5Y4 121 aa10.04□□□□□ -0.8
EDC3-216ENST00000569561 ERG28Q9UKR5 140 aa10.04□□□□□ -0.8
EDC3-216ENST00000569561 NUPR1O60356 82 aa10.03□□□□□ -0.8
EDC3-216ENST00000569561 LINC00167Q96N53 147 aa10.03□□□□□ -0.8
EDC3-216ENST00000569561 UBR4Q5T4S7 5183 aa10.03□□□□□ -0.8
EDC3-216ENST00000569561 PFN2P35080 140 aa10.02□□□□□ -0.81
EDC3-216ENST00000569561 COX17Q14061 63 aa10.02□□□□□ -0.81
EDC3-216ENST00000569561 SFTA2Q6UW10 78 aa10.02□□□□□ -0.81
EDC3-216ENST00000569561 ZNF861PO60384 105 aa10.01□□□□□ -0.81
EDC3-216ENST00000569561 SND1-IT1Q9HBX3 110 aa10.01□□□□□ -0.81
EDC3-216ENST00000569561 VPREB1P12018 145 aa10□□□□□ -0.81
EDC3-216ENST00000569561 Q8NDZ9 215 aa10□□□□□ -0.81
EDC3-216ENST00000569561 BCE1O60756 84 aa9.98□□□□□ -0.81
EDC3-216ENST00000569561 LEPROTL1O95214 131 aa9.98□□□□□ -0.81
EDC3-216ENST00000569561 PRR26Q8N8Z3 221 aa9.98□□□□□ -0.81
EDC3-216ENST00000569561 LRP2P98164 4655 aa9.97□□□□□ -0.81
EDC3-216ENST00000569561 GAGE10A6NGK3 116 aa9.97□□□□□ -0.81
EDC3-216ENST00000569561 RPL37AP8A6NKH3 93 aa9.97□□□□□ -0.81
EDC3-216ENST00000569561 SCO1O75880 301 aa9.97□□□□□ -0.81
EDC3-216ENST00000569561 KRTAP13-1Q8IUC0 172 aa9.97□□□□□ -0.81
EDC3-216ENST00000569561 IGLV1-50A0A075B6I6 118 aa9.95□□□□□ -0.82
EDC3-216ENST00000569561 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
EDC3-216ENST00000569561 HSPB8Q9UJY1 196 aa9.94□□□□□ -0.82
EDC3-216ENST00000569561 H0Y8G0 127 aa9.93□□□□□ -0.82
EDC3-216ENST00000569561 TSPEAR-AS2P59090 65 aa9.93□□□□□ -0.82
EDC3-216ENST00000569561 HIST1H2BKO60814 126 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms