RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 CHTF8P0CG12 524 aa16.67■□□□□ 0.26
NME3-209ENST00000566600 CKS1BP61024 79 aa16.67■□□□□ 0.26
NME3-209ENST00000566600 UNQ6190/PRO20217Q6UXQ8 127 aa16.67■□□□□ 0.26
NME3-209ENST00000566600 IGKV2-24A0A0C4DH68 120 aa16.66■□□□□ 0.26
NME3-209ENST00000566600 A0A096LNI7 61 aa16.65■□□□□ 0.26
NME3-209ENST00000566600 TRBV30A0A0K0K1B3 111 aa16.65■□□□□ 0.26
NME3-209ENST00000566600 C10orf25Q5T742 122 aa16.65■□□□□ 0.26
NME3-209ENST00000566600 FAM229AH3BQW9 127 aa16.64■□□□□ 0.25
NME3-209ENST00000566600 SPINK8P0C7L1 97 aa16.64■□□□□ 0.25
NME3-209ENST00000566600 ZNF22P17026 224 aaPredicted RBP16.64■□□□□ 0.25
NME3-209ENST00000566600 CXCL5P42830 114 aa16.64■□□□□ 0.25
NME3-209ENST00000566600 MAJINQ3KP22 176 aa16.64■□□□□ 0.25
NME3-209ENST00000566600 C2orf82Q6UX34 121 aa16.64■□□□□ 0.25
NME3-209ENST00000566600 C6orf48Q9UBA6 75 aa16.64■□□□□ 0.25
NME3-209ENST00000566600 EPM2AB3EWF7 344 aa16.63■□□□□ 0.25
NME3-209ENST00000566600 COX7B2Q8TF08 81 aa16.63■□□□□ 0.25
NME3-209ENST00000566600 C11orf86A6NJI1 115 aa16.62■□□□□ 0.25
NME3-209ENST00000566600 F8VRH5 84 aa16.62■□□□□ 0.25
NME3-209ENST00000566600 FABP4P15090 132 aa16.62■□□□□ 0.25
NME3-209ENST00000566600 PTTG1IPP53801 180 aa16.62■□□□□ 0.25
NME3-209ENST00000566600 KRTAP17-1Q9BYP8 105 aa16.62■□□□□ 0.25
NME3-209ENST00000566600 A0A087WYN8 130 aa16.61■□□□□ 0.25
NME3-209ENST00000566600 TLX1NBP0CAT3 122 aa16.61■□□□□ 0.25
NME3-209ENST00000566600 GAGE2BQ13066 116 aa16.61■□□□□ 0.25
NME3-209ENST00000566600 RPL18AQ02543 176 aaKnown RBP16.6■□□□□ 0.25
NME3-209ENST00000566600 TMEM170BQ5T4T1 132 aa16.6■□□□□ 0.25
NME3-209ENST00000566600 Q5VSD8 79 aa16.6■□□□□ 0.25
NME3-209ENST00000566600 LINC00528Q8N1L1 170 aa16.59■□□□□ 0.25
NME3-209ENST00000566600 PLAC8Q9NZF1 115 aa16.59■□□□□ 0.25
NME3-209ENST00000566600 IGLV5-39A0A0G2JS06 123 aa16.58■□□□□ 0.24
NME3-209ENST00000566600 H0Y8G0 127 aa16.58■□□□□ 0.24
NME3-209ENST00000566600 COA6Q5JTJ3 125 aaKnown RBP16.57■□□□□ 0.24
NME3-209ENST00000566600 STPG4Q8N801 248 aa16.57■□□□□ 0.24
NME3-209ENST00000566600 ODF1Q14990 250 aa16.56■□□□□ 0.24
NME3-209ENST00000566600 MAP1LC3CQ9BXW4 147 aa16.56■□□□□ 0.24
NME3-209ENST00000566600 PLA2G1BP04054 148 aaKnown RBP16.54■□□□□ 0.24
NME3-209ENST00000566600 KRTAP4-5Q9BYR2 181 aa16.54■□□□□ 0.24
NME3-209ENST00000566600 NDUFC2-KCTD14E9PQ53 114 aa16.53■□□□□ 0.24
NME3-209ENST00000566600 C9orf116Q5BN46 136 aaPredicted RBP16.52■□□□□ 0.24
NME3-209ENST00000566600 Q6ZRP5 223 aa16.52■□□□□ 0.24
NME3-209ENST00000566600 PLNP26678 52 aa16.51■□□□□ 0.23
NME3-209ENST00000566600 TMEM223A0PJW6 202 aa16.5■□□□□ 0.23
NME3-209ENST00000566600 GAGE2EQ4V326 116 aa16.49■□□□□ 0.23
NME3-209ENST00000566600 GAGE2DQ9UEU5 116 aa16.49■□□□□ 0.23
NME3-209ENST00000566600 SFTA2Q6UW10 78 aa16.48■□□□□ 0.23
NME3-209ENST00000566600 DPM2O94777 84 aa16.47■□□□□ 0.23
NME3-209ENST00000566600 C7orf33Q8WU49 177 aa16.47■□□□□ 0.23
NME3-209ENST00000566600 SYS1-DBNDD2H3BUS1 97 aa16.45■□□□□ 0.22
NME3-209ENST00000566600 FAT1Q14517 4588 aa16.45■□□□□ 0.22
NME3-209ENST00000566600 SRRM2Q9UQ35 2752 aaKnown RBP16.44■□□□□ 0.22
NME3-209ENST00000566600 IGKCP01834 107 aa16.44■□□□□ 0.22
NME3-209ENST00000566600 A0A1W2PNN7 141 aa16.43■□□□□ 0.22
NME3-209ENST00000566600 RPL37AP61513 92 aaKnown RBP16.43■□□□□ 0.22
NME3-209ENST00000566600 PET117Q6UWS5 81 aa16.41■□□□□ 0.22
NME3-209ENST00000566600 PMCHL2Q9BQD1 86 aa16.41■□□□□ 0.22
NME3-209ENST00000566600 VPS13BQ7Z7G8 4022 aa16.41■□□□□ 0.22
NME3-209ENST00000566600 HERVK_113P61574 105 aa16.39■□□□□ 0.21
NME3-209ENST00000566600 INAFM2P0DMQ5 153 aa16.38■□□□□ 0.21
NME3-209ENST00000566600 C9orf129Q5T035 196 aaKnown RBP16.38■□□□□ 0.21
NME3-209ENST00000566600 ZNF625Q96I27 306 aaPredicted RBP16.38■□□□□ 0.21
NME3-209ENST00000566600 COX17Q14061 63 aa16.37■□□□□ 0.21
NME3-209ENST00000566600 LINC01545Q5VT33 79 aa16.36■□□□□ 0.21
NME3-209ENST00000566600 PLEKHB2Q96CS7 222 aa16.36■□□□□ 0.21
NME3-209ENST00000566600 ERG28Q9UKR5 140 aa16.36■□□□□ 0.21
NME3-209ENST00000566600 FAM168BA1KXE4 195 aa16.35■□□□□ 0.21
NME3-209ENST00000566600 LEPROTO15243 131 aa16.35■□□□□ 0.21
NME3-209ENST00000566600 S100A6P06703 90 aa16.35■□□□□ 0.21
NME3-209ENST00000566600 C3orf79P0CE67 100 aa16.35■□□□□ 0.21
NME3-209ENST00000566600 KRTAP10-4P60372 401 aaPredicted RBP16.35■□□□□ 0.21
NME3-209ENST00000566600 XAGE1AQ9HD64 81 aa16.35■□□□□ 0.21
NME3-209ENST00000566600 PFN2P35080 140 aa16.34■□□□□ 0.21
NME3-209ENST00000566600 KRTDAPP60985 99 aa16.34■□□□□ 0.21
NME3-209ENST00000566600 FAM19A5Q7Z5A7 132 aaPredicted RBP16.34■□□□□ 0.21
NME3-209ENST00000566600 HERV-K104P63124 156 aa16.32■□□□□ 0.2
NME3-209ENST00000566600 S100A2P29034 98 aa16.31■□□□□ 0.2
NME3-209ENST00000566600 NDUFA12Q9UI09 145 aa16.31■□□□□ 0.2
NME3-209ENST00000566600 ABCA13Q86UQ4 5058 aa16.31■□□□□ 0.2
NME3-209ENST00000566600 MYMXA0A1B0GTQ4 84 aa16.3■□□□□ 0.2
NME3-209ENST00000566600 C20orf202A1L168 122 aa16.3■□□□□ 0.2
NME3-209ENST00000566600 PHF5AQ7RTV0 110 aaKnown RBP16.3■□□□□ 0.2
NME3-209ENST00000566600 HIST3H2BBQ8N257 126 aa16.3■□□□□ 0.2
NME3-209ENST00000566600 M0QXV9 152 aa16.29■□□□□ 0.2
NME3-209ENST00000566600 LINC00587B1AMM8 73 aa16.28■□□□□ 0.2
NME3-209ENST00000566600 J3QQQ9 107 aa16.28■□□□□ 0.2
NME3-209ENST00000566600 NMUP48645 174 aa16.27■□□□□ 0.2
NME3-209ENST00000566600 PRR3P79522 188 aaKnown RBP16.27■□□□□ 0.2
NME3-209ENST00000566600 KRTAP7-1Q8IUC3 87 aa16.27■□□□□ 0.2
NME3-209ENST00000566600 PLA2G2DQ9UNK4 145 aa16.27■□□□□ 0.2
NME3-209ENST00000566600 LGALS3P17931 250 aaKnown RBP16.26■□□□□ 0.19
NME3-209ENST00000566600 AKR1D1P51857 326 aa16.26■□□□□ 0.19
NME3-209ENST00000566600 LINC00158P58513 81 aa16.26■□□□□ 0.19
NME3-209ENST00000566600 E9PLD3 99 aa16.25■□□□□ 0.19
NME3-209ENST00000566600 TSPEAR-AS2P59090 65 aa16.25■□□□□ 0.19
NME3-209ENST00000566600 MEIG1Q5JSS6 88 aa16.25■□□□□ 0.19
NME3-209ENST00000566600 SERTAD4-AS1Q5TG53 156 aa16.25■□□□□ 0.19
NME3-209ENST00000566600 HIST1H2BLQ99880 126 aa16.24■□□□□ 0.19
NME3-209ENST00000566600 SND1-IT1Q9HBX3 110 aa16.24■□□□□ 0.19
NME3-209ENST00000566600 PCLOQ9Y6V0 5065 aa16.24■□□□□ 0.19
NME3-209ENST00000566600 LBHQ53QV2 105 aaPredicted RBP16.23■□□□□ 0.19
NME3-209ENST00000566600 TP73-AS1Q9UF72 201 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms