RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 C6orf223Q8N319 242 aa7.33□□□□□ -1.24
SF3B3-205ENST00000564899 MAPKAPK5-AS1Q8N8E1 139 aa7.33□□□□□ -1.24
SF3B3-205ENST00000564899 C14orf144Q96I85 54 aa7.33□□□□□ -1.24
SF3B3-205ENST00000564899 TTTY13Q9BZ97 58 aa7.33□□□□□ -1.24
SF3B3-205ENST00000564899 PRO1933Q9H354 126 aa7.33□□□□□ -1.24
SF3B3-205ENST00000564899 UBR4Q5T4S7 5183 aa7.33□□□□□ -1.24
SF3B3-205ENST00000564899 USP17L23D6RBM5 183 aa7.32□□□□□ -1.24
SF3B3-205ENST00000564899 COX8AP10176 69 aa7.32□□□□□ -1.24
SF3B3-205ENST00000564899 HIGD2BQ4VC39 106 aa7.32□□□□□ -1.24
SF3B3-205ENST00000564899 Q8IZM0 81 aa7.32□□□□□ -1.24
SF3B3-205ENST00000564899 C15orf56Q8N910 161 aa7.32□□□□□ -1.24
SF3B3-205ENST00000564899 NDUFA12Q9UI09 145 aa7.32□□□□□ -1.24
SF3B3-205ENST00000564899 MYMXA0A1B0GTQ4 84 aa7.31□□□□□ -1.24
SF3B3-205ENST00000564899 ZNF815PA8K554 130 aa7.31□□□□□ -1.24
SF3B3-205ENST00000564899 KIAA0087Q14695 138 aa7.31□□□□□ -1.24
SF3B3-205ENST00000564899 C6orf226Q5I0X4 101 aa7.31□□□□□ -1.24
SF3B3-205ENST00000564899 C1orf134Q5TEV5 83 aa7.31□□□□□ -1.24
SF3B3-205ENST00000564899 SLC25A34Q6PIV7 304 aa7.31□□□□□ -1.24
SF3B3-205ENST00000564899 Q6ZRN7 208 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-205ENST00000564899 TP73-AS1Q9UF72 201 aa7.31□□□□□ -1.24
SF3B3-205ENST00000564899 MYCBP2O75592 4640 aa7.31□□□□□ -1.24
SF3B3-205ENST00000564899 FAT1Q14517 4588 aa7.3□□□□□ -1.24
SF3B3-205ENST00000564899 GVQW2A0A096LPI5 108 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-205ENST00000564899 TSTD3H0UI37 97 aa7.3□□□□□ -1.24
SF3B3-205ENST00000564899 ZNF561-AS1K7EIQ3 104 aa7.3□□□□□ -1.24
SF3B3-205ENST00000564899 LECT2O14960 151 aa7.3□□□□□ -1.24
SF3B3-205ENST00000564899 NDUFA1O15239 70 aa7.3□□□□□ -1.24
SF3B3-205ENST00000564899 CXCL5P42830 114 aa7.3□□□□□ -1.24
SF3B3-205ENST00000564899 CKS1BP61024 79 aa7.3□□□□□ -1.24
SF3B3-205ENST00000564899 BOD1L2Q8IYS8 172 aa7.3□□□□□ -1.24
SF3B3-205ENST00000564899 LINC00526Q96FQ7 95 aa7.3□□□□□ -1.24
SF3B3-205ENST00000564899 DLEU1O43261 78 aa7.29□□□□□ -1.24
SF3B3-205ENST00000564899 C2orf82Q6UX34 121 aa7.29□□□□□ -1.24
SF3B3-205ENST00000564899 ZNF625Q96I27 306 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-205ENST00000564899 UQCR10Q9UDW1 63 aa7.29□□□□□ -1.24
SF3B3-205ENST00000564899 DMBT1Q9UGM3 2413 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-205ENST00000564899 WFDC2Q14508 124 aa7.28□□□□□ -1.24
SF3B3-205ENST00000564899 SFTA2Q6UW10 78 aa7.28□□□□□ -1.24
SF3B3-205ENST00000564899 NTN5Q8WTR8 489 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-205ENST00000564899 A0A0J9YXY3 114 aa7.27□□□□□ -1.25
SF3B3-205ENST00000564899 HERV-K104P63124 156 aa7.27□□□□□ -1.25
SF3B3-205ENST00000564899 C14orf177Q52M58 125 aa7.27□□□□□ -1.25
SF3B3-205ENST00000564899 SCGB1D4Q6XE38 83 aa7.27□□□□□ -1.25
SF3B3-205ENST00000564899 C2orf48Q96LS8 159 aa7.27□□□□□ -1.25
SF3B3-205ENST00000564899 CAMK2N2Q96S95 79 aa7.27□□□□□ -1.25
SF3B3-205ENST00000564899 MIEN1Q9BRT3 115 aa7.27□□□□□ -1.25
SF3B3-205ENST00000564899 LRCOL1A6NCL2 159 aa7.25□□□□□ -1.25
SF3B3-205ENST00000564899 F8WDY8 70 aa7.25□□□□□ -1.25
SF3B3-205ENST00000564899 HNRNPA3P51991 378 aaKnown RBP7.25□□□□□ -1.25
SF3B3-205ENST00000564899 MEIG1Q5JSS6 88 aa7.25□□□□□ -1.25
SF3B3-205ENST00000564899 C10orf25Q5T742 122 aa7.25□□□□□ -1.25
SF3B3-205ENST00000564899 UNQ6190/PRO20217Q6UXQ8 127 aa7.25□□□□□ -1.25
SF3B3-205ENST00000564899 A0A087WTM6 91 aa7.24□□□□□ -1.25
SF3B3-205ENST00000564899 SYCNQ0VAF6 134 aa7.24□□□□□ -1.25
SF3B3-205ENST00000564899 Q6ZRU5 148 aa7.24□□□□□ -1.25
SF3B3-205ENST00000564899 C2orf91Q6ZV80 131 aa7.24□□□□□ -1.25
SF3B3-205ENST00000564899 CARD19Q96LW7 228 aa7.24□□□□□ -1.25
SF3B3-205ENST00000564899 TRBV30A0A0K0K1B3 111 aa7.23□□□□□ -1.25
SF3B3-205ENST00000564899 HIGD1BQ9P298 99 aa7.23□□□□□ -1.25
SF3B3-205ENST00000564899 C6orf48Q9UBA6 75 aa7.23□□□□□ -1.25
SF3B3-205ENST00000564899 ERG28Q9UKR5 140 aa7.23□□□□□ -1.25
SF3B3-205ENST00000564899 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-205ENST00000564899 A0A0U1RRA0 63 aa7.22□□□□□ -1.25
SF3B3-205ENST00000564899 LINC00587B1AMM8 73 aa7.22□□□□□ -1.25
SF3B3-205ENST00000564899 TMEM238C9JI98 176 aa7.22□□□□□ -1.25
SF3B3-205ENST00000564899 TIMM17BO60830 172 aa7.22□□□□□ -1.25
SF3B3-205ENST00000564899 SLPIP03973 132 aa7.22□□□□□ -1.25
SF3B3-205ENST00000564899 SMIM13P0DJ93 91 aa7.22□□□□□ -1.25
SF3B3-205ENST00000564899 DDTP30046 118 aa7.22□□□□□ -1.25
SF3B3-205ENST00000564899 PFN2P35080 140 aa7.22□□□□□ -1.25
SF3B3-205ENST00000564899 CIRBPQ14011 172 aaKnown RBP7.22□□□□□ -1.25
SF3B3-205ENST00000564899 C9orf116Q5BN46 136 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-205ENST00000564899 Q8N814 137 aa7.22□□□□□ -1.25
SF3B3-205ENST00000564899 VPS13BQ7Z7G8 4022 aa7.22□□□□□ -1.25
SF3B3-205ENST00000564899 PCP4L1A6NKN8 68 aa7.21□□□□□ -1.26
SF3B3-205ENST00000564899 EREGO14944 169 aa7.21□□□□□ -1.26
SF3B3-205ENST00000564899 LINC00158P58513 81 aa7.21□□□□□ -1.26
SF3B3-205ENST00000564899 CNBPP62633 177 aaKnown RBP7.21□□□□□ -1.26
SF3B3-205ENST00000564899 TNP2Q05952 138 aa7.21□□□□□ -1.26
SF3B3-205ENST00000564899 LITAFQ99732 161 aa7.21□□□□□ -1.26
SF3B3-205ENST00000564899 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-205ENST00000564899 CDK2AP2O75956 126 aa7.2□□□□□ -1.26
SF3B3-205ENST00000564899 Q8N1X5 172 aa7.2□□□□□ -1.26
SF3B3-205ENST00000564899 SPANXB1Q9NS25 103 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-205ENST00000564899 C16orf90A8MZG2 172 aa7.19□□□□□ -1.26
SF3B3-205ENST00000564899 SRSF9Q13242 221 aaKnown RBP eCLIP7.19□□□□□ -1.26
SF3B3-205ENST00000564899 COX17Q14061 63 aa7.19□□□□□ -1.26
SF3B3-205ENST00000564899 RNF151Q2KHN1 245 aa7.19□□□□□ -1.26
SF3B3-205ENST00000564899 ADAMTSL4-AS1Q5T5F5 129 aa7.19□□□□□ -1.26
SF3B3-205ENST00000564899 MIR7-3HGQ8N6C7 128 aa7.19□□□□□ -1.26
SF3B3-205ENST00000564899 DAND5Q8N907 189 aa7.19□□□□□ -1.26
SF3B3-205ENST00000564899 HIST1H4GQ99525 98 aa7.19□□□□□ -1.26
SF3B3-205ENST00000564899 SRRM2Q9UQ35 2752 aaKnown RBP7.19□□□□□ -1.26
SF3B3-205ENST00000564899 CTAG1AP78358 180 aa7.18□□□□□ -1.26
SF3B3-205ENST00000564899 HSD52Q0P140 79 aa7.18□□□□□ -1.26
SF3B3-205ENST00000564899 SPANXDQ9BXN6 97 aa7.18□□□□□ -1.26
SF3B3-205ENST00000564899 SPANXCQ9NY87 97 aa7.18□□□□□ -1.26
SF3B3-205ENST00000564899 NDUFC2-KCTD14E9PQ53 114 aa7.17□□□□□ -1.26
SF3B3-205ENST00000564899 NPC2P61916 151 aa7.17□□□□□ -1.26
SF3B3-205ENST00000564899 TAL2Q16559 108 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms