RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 KRTAP9-2Q9BYQ4 174 aa8.61□□□□□ -1.03
CNOT1-206ENST00000564557 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
CNOT1-206ENST00000564557 TRBV30A0A0K0K1B3 111 aa8.6□□□□□ -1.03
CNOT1-206ENST00000564557 HBDP02042 147 aa8.6□□□□□ -1.03
CNOT1-206ENST00000564557 KRTAP10-4P60372 401 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-206ENST00000564557 KIAA0087Q14695 138 aa8.6□□□□□ -1.03
CNOT1-206ENST00000564557 C10orf25Q5T742 122 aa8.6□□□□□ -1.03
CNOT1-206ENST00000564557 CST9LQ9H4G1 147 aa8.6□□□□□ -1.03
CNOT1-206ENST00000564557 C6orf48Q9UBA6 75 aa8.6□□□□□ -1.03
CNOT1-206ENST00000564557 CDKN2A-AS1Q9UH64 79 aa8.6□□□□□ -1.03
CNOT1-206ENST00000564557 TINCRA0A1B0GVN0 87 aa8.59□□□□□ -1.03
CNOT1-206ENST00000564557 GAGE2EQ4V326 116 aa8.59□□□□□ -1.03
CNOT1-206ENST00000564557 C2orf82Q6UX34 121 aa8.59□□□□□ -1.03
CNOT1-206ENST00000564557 SLC7A5P1Q8MH63 180 aa8.59□□□□□ -1.03
CNOT1-206ENST00000564557 GAGE2DQ9UEU5 116 aa8.59□□□□□ -1.03
CNOT1-206ENST00000564557 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-206ENST00000564557 H3BRM9 83 aa8.58□□□□□ -1.04
CNOT1-206ENST00000564557 TLX1NBP0CAT3 122 aa8.58□□□□□ -1.04
CNOT1-206ENST00000564557 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-206ENST00000564557 Q8IZM0 81 aa8.58□□□□□ -1.04
CNOT1-206ENST00000564557 KRTAP29-1A8MX34 341 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-206ENST00000564557 ATP5LO75964 103 aa8.57□□□□□ -1.04
CNOT1-206ENST00000564557 CBLN2Q8IUK8 224 aa8.57□□□□□ -1.04
CNOT1-206ENST00000564557 A0A1W2PNN7 141 aa8.56□□□□□ -1.04
CNOT1-206ENST00000564557 OXTP01178 125 aa8.56□□□□□ -1.04
CNOT1-206ENST00000564557 CXCL5P42830 114 aa8.56□□□□□ -1.04
CNOT1-206ENST00000564557 PMCHL1Q16048 86 aa8.56□□□□□ -1.04
CNOT1-206ENST00000564557 PDZD11Q5EBL8 140 aa8.56□□□□□ -1.04
CNOT1-206ENST00000564557 Q6ZRP5 223 aa8.56□□□□□ -1.04
CNOT1-206ENST00000564557 NDUFC2-KCTD14E9PQ53 114 aa8.55□□□□□ -1.04
CNOT1-206ENST00000564557 BAGE3Q86Y29 109 aa8.55□□□□□ -1.04
CNOT1-206ENST00000564557 CHCHD1Q96BP2 118 aaKnown RBP8.55□□□□□ -1.04
CNOT1-206ENST00000564557 URB1-AS1Q96HZ7 61 aa8.55□□□□□ -1.04
CNOT1-206ENST00000564557 YPEL4Q96NS1 127 aa8.55□□□□□ -1.04
CNOT1-206ENST00000564557 KRTAP9-6A0A140TA67 174 aa8.54□□□□□ -1.04
CNOT1-206ENST00000564557 F8VRH5 84 aa8.54□□□□□ -1.04
CNOT1-206ENST00000564557 HNRNPA3P51991 378 aaKnown RBP8.54□□□□□ -1.04
CNOT1-206ENST00000564557 PRR3P79522 188 aaKnown RBP8.54□□□□□ -1.04
CNOT1-206ENST00000564557 COX7B2Q8TF08 81 aa8.54□□□□□ -1.04
CNOT1-206ENST00000564557 IGLV5-45A0A087WSX0 123 aa8.53□□□□□ -1.04
CNOT1-206ENST00000564557 A0A096LNJ9 63 aa8.53□□□□□ -1.04
CNOT1-206ENST00000564557 SMIM1B2RUZ4 78 aa8.53□□□□□ -1.04
CNOT1-206ENST00000564557 SPINK8P0C7L1 97 aa8.53□□□□□ -1.04
CNOT1-206ENST00000564557 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
CNOT1-206ENST00000564557 KRTAP4-12Q9BQ66 201 aa8.53□□□□□ -1.04
CNOT1-206ENST00000564557 DMBT1Q9UGM3 2413 aaPredicted RBP8.52□□□□□ -1.05
CNOT1-206ENST00000564557 HSBP1O75506 76 aa8.52□□□□□ -1.05
CNOT1-206ENST00000564557 PHF5AQ7RTV0 110 aaKnown RBP8.52□□□□□ -1.05
CNOT1-206ENST00000564557 TRGC2P03986 189 aa8.51□□□□□ -1.05
CNOT1-206ENST00000564557 IGLC3P0DOY3 106 aa8.51□□□□□ -1.05
CNOT1-206ENST00000564557 FAM168BA1KXE4 195 aa8.5□□□□□ -1.05
CNOT1-206ENST00000564557 UBE2BP63146 152 aa8.5□□□□□ -1.05
CNOT1-206ENST00000564557 MYCBP2O75592 4640 aa8.49□□□□□ -1.05
CNOT1-206ENST00000564557 TMEM170BQ5T4T1 132 aa8.49□□□□□ -1.05
CNOT1-206ENST00000564557 IFI27L1Q96BM0 104 aa8.49□□□□□ -1.05
CNOT1-206ENST00000564557 CHTOPQ9Y3Y2 248 aaKnown RBP8.49□□□□□ -1.05
CNOT1-206ENST00000564557 M0QXV9 152 aa8.48□□□□□ -1.05
CNOT1-206ENST00000564557 C1orf137Q5JT78 98 aa8.48□□□□□ -1.05
CNOT1-206ENST00000564557 SPINK6Q6UWN8 80 aa8.48□□□□□ -1.05
CNOT1-206ENST00000564557 KRTAP19-1Q8IUB9 90 aa8.48□□□□□ -1.05
CNOT1-206ENST00000564557 ZNF22P17026 224 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-206ENST00000564557 C9orf129Q5T035 196 aaKnown RBP8.47□□□□□ -1.05
CNOT1-206ENST00000564557 REG3GQ6UW15 175 aa8.47□□□□□ -1.05
CNOT1-206ENST00000564557 XAGE1AQ9HD64 81 aa8.47□□□□□ -1.05
CNOT1-206ENST00000564557 PSORS1C2Q9UIG4 136 aa8.47□□□□□ -1.05
CNOT1-206ENST00000564557 C11orf86A6NJI1 115 aa8.46□□□□□ -1.06
CNOT1-206ENST00000564557 FAM19A2Q8N3H0 131 aa8.46□□□□□ -1.06
CNOT1-206ENST00000564557 TRAV12-1A0A0B4J245 112 aa8.45□□□□□ -1.06
CNOT1-206ENST00000564557 LBHQ53QV2 105 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-206ENST00000564557 IGLV5-39A0A0G2JS06 123 aa8.44□□□□□ -1.06
CNOT1-206ENST00000564557 COLCA2A8K830 154 aa8.44□□□□□ -1.06
CNOT1-206ENST00000564557 H0Y8G0 127 aa8.44□□□□□ -1.06
CNOT1-206ENST00000564557 LEPROTL1O95214 131 aa8.44□□□□□ -1.06
CNOT1-206ENST00000564557 SERF1AO75920 110 aa8.43□□□□□ -1.06
CNOT1-206ENST00000564557 PFN2P35080 140 aa8.43□□□□□ -1.06
CNOT1-206ENST00000564557 SFTA2Q6UW10 78 aa8.43□□□□□ -1.06
CNOT1-206ENST00000564557 SRSF9Q13242 221 aaKnown RBP eCLIP8.42□□□□□ -1.06
CNOT1-206ENST00000564557 HSPB8Q9UJY1 196 aa8.42□□□□□ -1.06
CNOT1-206ENST00000564557 C22orf24Q9Y442 160 aa8.42□□□□□ -1.06
CNOT1-206ENST00000564557 PKHD1L1Q86WI1 4243 aa8.42□□□□□ -1.06
CNOT1-206ENST00000564557 IGLV7-43P04211 117 aa8.41□□□□□ -1.06
CNOT1-206ENST00000564557 SERTAD4-AS1Q5TG53 156 aa8.41□□□□□ -1.06
CNOT1-206ENST00000564557 FABP4P15090 132 aa8.4□□□□□ -1.06
CNOT1-206ENST00000564557 KRTAP7-1Q8IUC3 87 aa8.4□□□□□ -1.06
CNOT1-206ENST00000564557 NKAPP1Q8N9T2 125 aa8.4□□□□□ -1.06
CNOT1-206ENST00000564557 ZNF625Q96I27 306 aaPredicted RBP8.4□□□□□ -1.06
CNOT1-206ENST00000564557 ERG28Q9UKR5 140 aa8.4□□□□□ -1.06
CNOT1-206ENST00000564557 TMEM223A0PJW6 202 aa8.39□□□□□ -1.07
CNOT1-206ENST00000564557 ATP6V1G1O75348 118 aa8.39□□□□□ -1.07
CNOT1-206ENST00000564557 COX17Q14061 63 aa8.39□□□□□ -1.07
CNOT1-206ENST00000564557 MRPL55Q7Z7F7 128 aaKnown RBP8.39□□□□□ -1.07
CNOT1-206ENST00000564557 DIRC1Q969H9 104 aa8.39□□□□□ -1.07
CNOT1-206ENST00000564557 LINC01600Q96MT4 127 aa8.39□□□□□ -1.07
CNOT1-206ENST00000564557 TP73-AS1Q9UF72 201 aa8.39□□□□□ -1.07
CNOT1-206ENST00000564557 LRP1Q07954 4544 aaKnown RBP8.39□□□□□ -1.07
CNOT1-206ENST00000564557 SCO1O75880 301 aa8.38□□□□□ -1.07
CNOT1-206ENST00000564557 FAT3Q8TDW7 4589 aa8.37□□□□□ -1.07
CNOT1-206ENST00000564557 HERC1Q15751 4861 aa8.37□□□□□ -1.07
CNOT1-206ENST00000564557 NUPR1O60356 82 aa8.37□□□□□ -1.07
CNOT1-206ENST00000564557 LINC00158P58513 81 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms