RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 CXCL5P42830 114 aa9.1□□□□□ -0.95
SPG7-210ENST00000564409 C9orf129Q5T035 196 aaKnown RBP9.1□□□□□ -0.95
SPG7-210ENST00000564409 ZC2HC1BQ5TFG8 222 aa9.1□□□□□ -0.95
SPG7-210ENST00000564409 F8VRH5 84 aa9.09□□□□□ -0.95
SPG7-210ENST00000564409 KRTAP11-1Q8IUC1 163 aa9.09□□□□□ -0.95
SPG7-210ENST00000564409 CDKN2A-AS1Q9UH64 79 aa9.09□□□□□ -0.95
SPG7-210ENST00000564409 COX19Q49B96 90 aa9.08□□□□□ -0.96
SPG7-210ENST00000564409 LBHQ53QV2 105 aaPredicted RBP9.08□□□□□ -0.96
SPG7-210ENST00000564409 GNB1LQ9BYB4 327 aa9.08□□□□□ -0.96
SPG7-210ENST00000564409 TMEM218A2RU14 115 aa9.07□□□□□ -0.96
SPG7-210ENST00000564409 NUPR1O60356 82 aa9.07□□□□□ -0.96
SPG7-210ENST00000564409 S100PP25815 95 aa9.07□□□□□ -0.96
SPG7-210ENST00000564409 PRR26Q8N8Z3 221 aa9.07□□□□□ -0.96
SPG7-210ENST00000564409 SCGB3A1Q96QR1 104 aa9.07□□□□□ -0.96
SPG7-210ENST00000564409 TP73-AS1Q9UF72 201 aa9.07□□□□□ -0.96
SPG7-210ENST00000564409 TINCRA0A1B0GVN0 87 aa9.06□□□□□ -0.96
SPG7-210ENST00000564409 LINC01546A6NGU7 62 aa9.06□□□□□ -0.96
SPG7-210ENST00000564409 RPL13AP40429 203 aaKnown RBP9.06□□□□□ -0.96
SPG7-210ENST00000564409 KIAA1644Q3SXP7 199 aa9.06□□□□□ -0.96
SPG7-210ENST00000564409 PDZD11Q5EBL8 140 aa9.06□□□□□ -0.96
SPG7-210ENST00000564409 LRP2P98164 4655 aa9.06□□□□□ -0.96
SPG7-210ENST00000564409 LINC00469Q8N7U9 141 aa9.05□□□□□ -0.96
SPG7-210ENST00000564409 SEC11CQ9BY50 192 aa9.05□□□□□ -0.96
SPG7-210ENST00000564409 CARHSP1Q9Y2V2 147 aaKnown RBP9.05□□□□□ -0.96
SPG7-210ENST00000564409 IGLV5-45A0A087WSX0 123 aa9.04□□□□□ -0.96
SPG7-210ENST00000564409 ZNF861PO60384 105 aa9.04□□□□□ -0.96
SPG7-210ENST00000564409 KRTAP1-4P0C5Y4 121 aa9.04□□□□□ -0.96
SPG7-210ENST00000564409 ADCYAP1P18509 176 aa9.04□□□□□ -0.96
SPG7-210ENST00000564409 C22orf24Q9Y442 160 aa9.04□□□□□ -0.96
SPG7-210ENST00000564409 SMIM1B2RUZ4 78 aa9.03□□□□□ -0.96
SPG7-210ENST00000564409 XAGE1AQ9HD64 81 aa9.03□□□□□ -0.96
SPG7-210ENST00000564409 IFITM2Q01629 132 aa9.02□□□□□ -0.97
SPG7-210ENST00000564409 COX7B2Q8TF08 81 aa9.02□□□□□ -0.97
SPG7-210ENST00000564409 CST9LQ9H4G1 147 aa9.02□□□□□ -0.97
SPG7-210ENST00000564409 PMVKQ15126 192 aa9.01□□□□□ -0.97
SPG7-210ENST00000564409 MRPL55Q7Z7F7 128 aaKnown RBP9.01□□□□□ -0.97
SPG7-210ENST00000564409 MRPL18Q9H0U6 180 aaKnown RBP9.01□□□□□ -0.97
SPG7-210ENST00000564409 RNF213Q63HN8 5207 aa9.01□□□□□ -0.97
SPG7-210ENST00000564409 H3BRM9 83 aa9□□□□□ -0.97
SPG7-210ENST00000564409 FA2HQ7L5A8 372 aa9□□□□□ -0.97
SPG7-210ENST00000564409 SMCO4Q9NRQ5 59 aa9□□□□□ -0.97
SPG7-210ENST00000564409 RPL28P46779 137 aaKnown RBP8.99□□□□□ -0.97
SPG7-210ENST00000564409 BCE1O60756 84 aa8.97□□□□□ -0.97
SPG7-210ENST00000564409 FABP9Q0Z7S8 132 aa8.97□□□□□ -0.97
SPG7-210ENST00000564409 RHEBQ15382 184 aa8.97□□□□□ -0.97
SPG7-210ENST00000564409 IGLV5-37A0A075B6J1 123 aa8.96□□□□□ -0.98
SPG7-210ENST00000564409 ATP5LO75964 103 aa8.96□□□□□ -0.98
SPG7-210ENST00000564409 C10orf91Q5T1B1 145 aa8.96□□□□□ -0.98
SPG7-210ENST00000564409 SPINK8P0C7L1 97 aa8.95□□□□□ -0.98
SPG7-210ENST00000564409 LINC00167Q96N53 147 aa8.95□□□□□ -0.98
SPG7-210ENST00000564409 IGLC3P0DOY3 106 aa8.94□□□□□ -0.98
SPG7-210ENST00000564409 COMMD7Q86VX2 200 aa8.94□□□□□ -0.98
SPG7-210ENST00000564409 NKAPP1Q8N9T2 125 aa8.94□□□□□ -0.98
SPG7-210ENST00000564409 RPS10P5Q9NQ39 176 aa8.93□□□□□ -0.98
SPG7-210ENST00000564409 IGLV5-39A0A0G2JS06 123 aa8.92□□□□□ -0.98
SPG7-210ENST00000564409 LINC00614P0C842 121 aa8.92□□□□□ -0.98
SPG7-210ENST00000564409 RAB5BP61020 215 aa8.92□□□□□ -0.98
SPG7-210ENST00000564409 SFTA2Q6UW10 78 aa8.92□□□□□ -0.98
SPG7-210ENST00000564409 RPL37AP8A6NKH3 93 aa8.91□□□□□ -0.98
SPG7-210ENST00000564409 CRYGAP11844 174 aa8.91□□□□□ -0.98
SPG7-210ENST00000564409 COX17Q14061 63 aa8.91□□□□□ -0.98
SPG7-210ENST00000564409 HBDP02042 147 aa8.9□□□□□ -0.98
SPG7-210ENST00000564409 TRAPPC1Q9Y5R8 145 aa8.9□□□□□ -0.98
SPG7-210ENST00000564409 NDUFA6P56556 154 aa8.89□□□□□ -0.99
SPG7-210ENST00000564409 C18orf32Q8TCD1 76 aa8.89□□□□□ -0.99
SPG7-210ENST00000564409 A0A096LNJ9 63 aa8.88□□□□□ -0.99
SPG7-210ENST00000564409 GAGE10A6NGK3 116 aa8.88□□□□□ -0.99
SPG7-210ENST00000564409 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
SPG7-210ENST00000564409 UBE2AP49459 152 aa8.88□□□□□ -0.99
SPG7-210ENST00000564409 PRR4Q16378 134 aa8.88□□□□□ -0.99
SPG7-210ENST00000564409 PFN2P35080 140 aa8.87□□□□□ -0.99
SPG7-210ENST00000564409 RPL24P83731 157 aaKnown RBP8.87□□□□□ -0.99
SPG7-210ENST00000564409 KRTAP13-1Q8IUC0 172 aa8.87□□□□□ -0.99
SPG7-210ENST00000564409 TYMSOSQ8TAI1 123 aa8.87□□□□□ -0.99
SPG7-210ENST00000564409 ERG28Q9UKR5 140 aa8.87□□□□□ -0.99
SPG7-210ENST00000564409 A0A087X002 238 aa8.86□□□□□ -0.99
SPG7-210ENST00000564409 FAM229BQ4G0N7 80 aa8.86□□□□□ -0.99
SPG7-210ENST00000564409 URB1-AS1Q96HZ7 61 aa8.86□□□□□ -0.99
SPG7-210ENST00000564409 SND1-IT1Q9HBX3 110 aa8.86□□□□□ -0.99
SPG7-210ENST00000564409 BAGE3Q86Y29 109 aa8.85□□□□□ -0.99
SPG7-210ENST00000564409 SNAPINO95295 136 aa8.84□□□□□ -0.99
SPG7-210ENST00000564409 VPREB1P12018 145 aa8.84□□□□□ -0.99
SPG7-210ENST00000564409 NDUFA5Q16718 116 aa8.84□□□□□ -0.99
SPG7-210ENST00000564409 TMEM170BQ5T4T1 132 aa8.84□□□□□ -0.99
SPG7-210ENST00000564409 LPAP08519 4548 aa8.83□□□□□ -1
SPG7-210ENST00000564409 IGKV2-28A0A075B6P5 120 aa8.83□□□□□ -1
SPG7-210ENST00000564409 C11orf86A6NJI1 115 aa8.83□□□□□ -1
SPG7-210ENST00000564409 IGKV2D-28P01615 120 aa8.83□□□□□ -1
SPG7-210ENST00000564409 CTAG1AP78358 180 aa8.83□□□□□ -1
SPG7-210ENST00000564409 SVBPQ8N300 66 aa8.83□□□□□ -1
SPG7-210ENST00000564409 TSPAN13O95857 204 aa8.82□□□□□ -1
SPG7-210ENST00000564409 ZNF625Q96I27 306 aaPredicted RBP8.82□□□□□ -1
SPG7-210ENST00000564409 APOC3P02656 99 aa8.81□□□□□ -1
SPG7-210ENST00000564409 PMCHL1Q16048 86 aa8.81□□□□□ -1
SPG7-210ENST00000564409 TMEM126AQ9H061 195 aa8.81□□□□□ -1
SPG7-210ENST00000564409 CHTOPQ9Y3Y2 248 aaKnown RBP8.81□□□□□ -1
SPG7-210ENST00000564409 TRAV12-1A0A0B4J245 112 aa8.8□□□□□ -1
SPG7-210ENST00000564409 CHCHD1Q96BP2 118 aaKnown RBP8.8□□□□□ -1
SPG7-210ENST00000564409 SCO1O75880 301 aa8.79□□□□□ -1
SPG7-210ENST00000564409 FAM19A1Q7Z5A9 133 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms