RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 LINC00173Q6ZV60 143 aa5.78□□□□□ -1.48
CLN6-203ENST00000563917 FAM19A3Q7Z5A8 133 aa5.78□□□□□ -1.48
CLN6-203ENST00000563917 LINC00469Q8N7U9 141 aa5.78□□□□□ -1.48
CLN6-203ENST00000563917 SCGB3A1Q96QR1 104 aa5.78□□□□□ -1.48
CLN6-203ENST00000563917 ZNF861PO60384 105 aa5.77□□□□□ -1.49
CLN6-203ENST00000563917 S100PP25815 95 aa5.77□□□□□ -1.49
CLN6-203ENST00000563917 ERASQ7Z444 233 aa5.77□□□□□ -1.49
CLN6-203ENST00000563917 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
CLN6-203ENST00000563917 XAGE1AQ9HD64 81 aa5.77□□□□□ -1.49
CLN6-203ENST00000563917 CDKN2A-AS1Q9UH64 79 aa5.77□□□□□ -1.49
CLN6-203ENST00000563917 CARHSP1Q9Y2V2 147 aaKnown RBP5.77□□□□□ -1.49
CLN6-203ENST00000563917 C22orf24Q9Y442 160 aa5.77□□□□□ -1.49
CLN6-203ENST00000563917 RPL28P46779 137 aaKnown RBP5.76□□□□□ -1.49
CLN6-203ENST00000563917 TOMM6Q96B49 74 aa5.76□□□□□ -1.49
CLN6-203ENST00000563917 TRAV9-1A0A075B6T8 112 aa5.75□□□□□ -1.49
CLN6-203ENST00000563917 PRR4Q16378 134 aa5.75□□□□□ -1.49
CLN6-203ENST00000563917 KIAA1644Q3SXP7 199 aa5.75□□□□□ -1.49
CLN6-203ENST00000563917 PDZD11Q5EBL8 140 aa5.75□□□□□ -1.49
CLN6-203ENST00000563917 MRPL55Q7Z7F7 128 aaKnown RBP5.75□□□□□ -1.49
CLN6-203ENST00000563917 KRTAP7-1Q8IUC3 87 aa5.75□□□□□ -1.49
CLN6-203ENST00000563917 SMCO4Q9NRQ5 59 aa5.75□□□□□ -1.49
CLN6-203ENST00000563917 TP73-AS1Q9UF72 201 aa5.75□□□□□ -1.49
CLN6-203ENST00000563917 TINCRA0A1B0GVN0 87 aa5.74□□□□□ -1.49
CLN6-203ENST00000563917 H3BRM9 83 aa5.74□□□□□ -1.49
CLN6-203ENST00000563917 COX19Q49B96 90 aa5.74□□□□□ -1.49
CLN6-203ENST00000563917 FA2HQ7L5A8 372 aa5.74□□□□□ -1.49
CLN6-203ENST00000563917 NKAPP1Q8N9T2 125 aa5.74□□□□□ -1.49
CLN6-203ENST00000563917 COX7B2Q8TF08 81 aa5.74□□□□□ -1.49
CLN6-203ENST00000563917 BCE1O60756 84 aa5.73□□□□□ -1.49
CLN6-203ENST00000563917 ATP5LO75964 103 aa5.73□□□□□ -1.49
CLN6-203ENST00000563917 KRTAP1-4P0C5Y4 121 aa5.73□□□□□ -1.49
CLN6-203ENST00000563917 LRP2P98164 4655 aa5.73□□□□□ -1.49
CLN6-203ENST00000563917 CLLU1Q5K131 121 aa5.73□□□□□ -1.49
CLN6-203ENST00000563917 UQCC3Q6UW78 93 aa5.73□□□□□ -1.49
CLN6-203ENST00000563917 MRPL18Q9H0U6 180 aaKnown RBP5.73□□□□□ -1.49
CLN6-203ENST00000563917 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
CLN6-203ENST00000563917 SMIM1B2RUZ4 78 aa5.72□□□□□ -1.49
CLN6-203ENST00000563917 RAB5BP61020 215 aa5.72□□□□□ -1.49
CLN6-203ENST00000563917 GNB1LQ9BYB4 327 aa5.72□□□□□ -1.49
CLN6-203ENST00000563917 SPINK8P0C7L1 97 aa5.71□□□□□ -1.5
CLN6-203ENST00000563917 CRYGAP11844 174 aa5.71□□□□□ -1.5
CLN6-203ENST00000563917 UBE2AP49459 152 aa5.71□□□□□ -1.5
CLN6-203ENST00000563917 PMVKQ15126 192 aa5.71□□□□□ -1.5
CLN6-203ENST00000563917 TYMSOSQ8TAI1 123 aa5.71□□□□□ -1.5
CLN6-203ENST00000563917 CST9LQ9H4G1 147 aa5.71□□□□□ -1.5
CLN6-203ENST00000563917 IGLV5-45A0A087WSX0 123 aa5.7□□□□□ -1.5
CLN6-203ENST00000563917 TMEM218A2RU14 115 aa5.7□□□□□ -1.5
CLN6-203ENST00000563917 GAGE10A6NGK3 116 aa5.7□□□□□ -1.5
CLN6-203ENST00000563917 RPL37AP8A6NKH3 93 aa5.7□□□□□ -1.5
CLN6-203ENST00000563917 TSPAN13O95857 204 aa5.7□□□□□ -1.5
CLN6-203ENST00000563917 ADCYAP1P18509 176 aa5.7□□□□□ -1.5
CLN6-203ENST00000563917 NDUFA6P56556 154 aa5.7□□□□□ -1.5
CLN6-203ENST00000563917 FABP9Q0Z7S8 132 aa5.7□□□□□ -1.5
CLN6-203ENST00000563917 LINC00167Q96N53 147 aa5.7□□□□□ -1.5
CLN6-203ENST00000563917 SEC11CQ9BY50 192 aa5.69□□□□□ -1.5
CLN6-203ENST00000563917 A0A0U1RQV1 116 aa5.68□□□□□ -1.5
CLN6-203ENST00000563917 PFN2P35080 140 aa5.68□□□□□ -1.5
CLN6-203ENST00000563917 RPL24P83731 157 aaKnown RBP5.68□□□□□ -1.5
CLN6-203ENST00000563917 IGLV5-37A0A075B6J1 123 aa5.67□□□□□ -1.5
CLN6-203ENST00000563917 LINC01546A6NGU7 62 aa5.67□□□□□ -1.5
CLN6-203ENST00000563917 SFTA2Q6UW10 78 aa5.67□□□□□ -1.5
CLN6-203ENST00000563917 IGKV2-28A0A075B6P5 120 aa5.66□□□□□ -1.5
CLN6-203ENST00000563917 IGKV2D-26A0A0A0MRZ7 120 aa5.66□□□□□ -1.5
CLN6-203ENST00000563917 IGKV2D-28P01615 120 aa5.66□□□□□ -1.5
CLN6-203ENST00000563917 COX17Q14061 63 aa5.66□□□□□ -1.5
CLN6-203ENST00000563917 RPS10P5Q9NQ39 176 aa5.66□□□□□ -1.5
CLN6-203ENST00000563917 A0A087X002 238 aa5.65□□□□□ -1.5
CLN6-203ENST00000563917 HBDP02042 147 aa5.65□□□□□ -1.5
CLN6-203ENST00000563917 IGLC3P0DOY3 106 aa5.65□□□□□ -1.5
CLN6-203ENST00000563917 RHEBQ15382 184 aa5.65□□□□□ -1.5
CLN6-203ENST00000563917 FAM229BQ4G0N7 80 aa5.65□□□□□ -1.5
CLN6-203ENST00000563917 ERG28Q9UKR5 140 aa5.65□□□□□ -1.5
CLN6-203ENST00000563917 ATP6V1G1O75348 118 aa5.64□□□□□ -1.51
CLN6-203ENST00000563917 LINC00614P0C842 121 aa5.64□□□□□ -1.51
CLN6-203ENST00000563917 TMEM170BQ5T4T1 132 aa5.64□□□□□ -1.51
CLN6-203ENST00000563917 FAM19A1Q7Z5A9 133 aa5.64□□□□□ -1.51
CLN6-203ENST00000563917 TRAPPC1Q9Y5R8 145 aa5.64□□□□□ -1.51
CLN6-203ENST00000563917 IGLV5-39A0A0G2JS06 123 aa5.63□□□□□ -1.51
CLN6-203ENST00000563917 ZNF22P17026 224 aaPredicted RBP5.63□□□□□ -1.51
CLN6-203ENST00000563917 COMMD7Q86VX2 200 aa5.63□□□□□ -1.51
CLN6-203ENST00000563917 LINC00304Q8N9R0 145 aa5.63□□□□□ -1.51
CLN6-203ENST00000563917 ZNF625Q96I27 306 aaPredicted RBP5.63□□□□□ -1.51
CLN6-203ENST00000563917 SND1-IT1Q9HBX3 110 aa5.63□□□□□ -1.51
CLN6-203ENST00000563917 TMA7Q9Y2S6 64 aaKnown RBP5.63□□□□□ -1.51
CLN6-203ENST00000563917 LINC00158P58513 81 aa5.62□□□□□ -1.51
CLN6-203ENST00000563917 PRLHP81277 87 aa5.62□□□□□ -1.51
CLN6-203ENST00000563917 BAGE3Q86Y29 109 aa5.62□□□□□ -1.51
CLN6-203ENST00000563917 ANAPC11Q9NYG5 84 aa5.62□□□□□ -1.51
CLN6-203ENST00000563917 SCO1O75880 301 aa5.61□□□□□ -1.51
CLN6-203ENST00000563917 VPREB1P12018 145 aa5.61□□□□□ -1.51
CLN6-203ENST00000563917 NDUFA5Q16718 116 aa5.61□□□□□ -1.51
CLN6-203ENST00000563917 CBLN2Q8IUK8 224 aa5.61□□□□□ -1.51
CLN6-203ENST00000563917 C18orf32Q8TCD1 76 aa5.61□□□□□ -1.51
CLN6-203ENST00000563917 TMEM126AQ9H061 195 aa5.61□□□□□ -1.51
CLN6-203ENST00000563917 S100A12P80511 92 aa5.6□□□□□ -1.51
CLN6-203ENST00000563917 KRTAP13-1Q8IUC0 172 aa5.6□□□□□ -1.51
CLN6-203ENST00000563917 HIGD2AQ9BW72 106 aa5.6□□□□□ -1.51
CLN6-203ENST00000563917 CHTOPQ9Y3Y2 248 aaKnown RBP5.6□□□□□ -1.51
CLN6-203ENST00000563917 LPAP08519 4548 aa5.6□□□□□ -1.51
CLN6-203ENST00000563917 TMEM238C9JI98 176 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms