RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 IMMP2LQ96T52 175 aa5.58□□□□□ -1.52
HDGFL3-204ENST00000563790 SMKR1H3BMG3 65 aa5.57□□□□□ -1.52
HDGFL3-204ENST00000563790 RGS21Q2M5E4 152 aa5.57□□□□□ -1.52
HDGFL3-204ENST00000563790 AMN1Q8IY45 258 aa5.57□□□□□ -1.52
HDGFL3-204ENST00000563790 ORAOV1Q8WV07 137 aa5.57□□□□□ -1.52
HDGFL3-204ENST00000563790 NDUFA12Q9UI09 145 aa5.57□□□□□ -1.52
HDGFL3-204ENST00000563790 KANTRA0A1W2PQU2 76 aa5.56□□□□□ -1.52
HDGFL3-204ENST00000563790 NDUFA1O15239 70 aa5.56□□□□□ -1.52
HDGFL3-204ENST00000563790 RPL39P62891 51 aaKnown RBP5.56□□□□□ -1.52
HDGFL3-204ENST00000563790 TMEM241Q24JQ0 296 aa5.56□□□□□ -1.52
HDGFL3-204ENST00000563790 GAGE2EQ4V326 116 aa5.56□□□□□ -1.52
HDGFL3-204ENST00000563790 SMIM15Q7Z3B0 74 aa5.56□□□□□ -1.52
HDGFL3-204ENST00000563790 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
HDGFL3-204ENST00000563790 GAGE2DQ9UEU5 116 aa5.56□□□□□ -1.52
HDGFL3-204ENST00000563790 DSTQ03001 7570 aaKnown RBP5.56□□□□□ -1.52
HDGFL3-204ENST00000563790 A8MWL6 223 aa5.55□□□□□ -1.52
HDGFL3-204ENST00000563790 VCYO14598 125 aa5.55□□□□□ -1.52
HDGFL3-204ENST00000563790 SUMO2P61956 95 aaKnown RBP5.55□□□□□ -1.52
HDGFL3-204ENST00000563790 A0A1B0GUT8 65 aa5.54□□□□□ -1.52
HDGFL3-204ENST00000563790 HIGD1CA8MV81 97 aa5.54□□□□□ -1.52
HDGFL3-204ENST00000563790 GATCO43716 136 aaKnown RBP5.54□□□□□ -1.52
HDGFL3-204ENST00000563790 RPL28P46779 137 aaKnown RBP5.54□□□□□ -1.52
HDGFL3-204ENST00000563790 C2orf82Q6UX34 121 aa5.54□□□□□ -1.52
HDGFL3-204ENST00000563790 NDUFC2-KCTD14E9PQ53 114 aa5.53□□□□□ -1.52
HDGFL3-204ENST00000563790 FCER1GP30273 86 aa5.53□□□□□ -1.52
HDGFL3-204ENST00000563790 RPL32P62910 135 aaKnown RBP5.53□□□□□ -1.52
HDGFL3-204ENST00000563790 MRPS36P82909 103 aaKnown RBP5.53□□□□□ -1.52
HDGFL3-204ENST00000563790 Q6Q795 121 aa5.53□□□□□ -1.52
HDGFL3-204ENST00000563790 TRBV24-1A0A075B6N3 115 aa5.52□□□□□ -1.53
HDGFL3-204ENST00000563790 TRBV30A0A0K0K1B3 111 aa5.52□□□□□ -1.53
HDGFL3-204ENST00000563790 TMEM250H0YL14 139 aa5.52□□□□□ -1.53
HDGFL3-204ENST00000563790 NUPR1O60356 82 aa5.52□□□□□ -1.53
HDGFL3-204ENST00000563790 KRTAP13-1Q8IUC0 172 aa5.52□□□□□ -1.53
HDGFL3-204ENST00000563790 TAGLN2P37802 199 aaKnown RBP5.51□□□□□ -1.53
HDGFL3-204ENST00000563790 MRPL51Q4U2R6 128 aaKnown RBP5.51□□□□□ -1.53
HDGFL3-204ENST00000563790 LINC01551Q86U37 167 aa5.51□□□□□ -1.53
HDGFL3-204ENST00000563790 CTDSP1Q9GZU7 261 aa5.51□□□□□ -1.53
HDGFL3-204ENST00000563790 SPANXA1Q9NS26 97 aa5.51□□□□□ -1.53
HDGFL3-204ENST00000563790 C22orf24Q9Y442 160 aa5.51□□□□□ -1.53
HDGFL3-204ENST00000563790 V9GYV3 84 aa5.51□□□□□ -1.53
HDGFL3-204ENST00000563790 TEX46H3BTG2 121 aa5.5□□□□□ -1.53
HDGFL3-204ENST00000563790 FAM104BQ5XKR9 115 aa5.5□□□□□ -1.53
HDGFL3-204ENST00000563790 SMAGPQ0VAQ4 97 aa5.49□□□□□ -1.53
HDGFL3-204ENST00000563790 FAM19A2Q8N3H0 131 aa5.49□□□□□ -1.53
HDGFL3-204ENST00000563790 C20orf78Q9BR46 151 aa5.49□□□□□ -1.53
HDGFL3-204ENST00000563790 OSTCQ9NRP0 149 aa5.49□□□□□ -1.53
HDGFL3-204ENST00000563790 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
HDGFL3-204ENST00000563790 IFITM10A6NMD0 228 aa5.48□□□□□ -1.53
HDGFL3-204ENST00000563790 PPP1R2P9O14990 202 aa5.48□□□□□ -1.53
HDGFL3-204ENST00000563790 BCE1O60756 84 aa5.48□□□□□ -1.53
HDGFL3-204ENST00000563790 PPP1R17O96001 155 aa5.48□□□□□ -1.53
HDGFL3-204ENST00000563790 HBBP68871 147 aa5.48□□□□□ -1.53
HDGFL3-204ENST00000563790 SMIM2Q9BVW6 85 aa5.48□□□□□ -1.53
HDGFL3-204ENST00000563790 TP73-AS1Q9UF72 201 aa5.48□□□□□ -1.53
HDGFL3-204ENST00000563790 IGLV4-3A0A075B6K6 122 aa5.47□□□□□ -1.53
HDGFL3-204ENST00000563790 C3orf22Q8N5N4 141 aa5.47□□□□□ -1.53
HDGFL3-204ENST00000563790 LINC00469Q8N7U9 141 aa5.47□□□□□ -1.53
HDGFL3-204ENST00000563790 TMEM18Q96B42 140 aa5.47□□□□□ -1.53
HDGFL3-204ENST00000563790 XAGE1AQ9HD64 81 aa5.47□□□□□ -1.53
HDGFL3-204ENST00000563790 TGIF2-C20orf24A0A0A6YYL0 155 aa5.46□□□□□ -1.54
HDGFL3-204ENST00000563790 LINC00862A6NCI5 91 aa5.46□□□□□ -1.54
HDGFL3-204ENST00000563790 ZNF727A8MUV8 499 aa5.46□□□□□ -1.54
HDGFL3-204ENST00000563790 NPYP01303 97 aa5.46□□□□□ -1.54
HDGFL3-204ENST00000563790 LINC01561Q8N1V8 128 aa5.46□□□□□ -1.54
HDGFL3-204ENST00000563790 BORCS7Q96B45 105 aa5.46□□□□□ -1.54
HDGFL3-204ENST00000563790 PACRGQ96M98 296 aaPredicted RBP5.46□□□□□ -1.54
HDGFL3-204ENST00000563790 PYGO1Q9Y3Y4 419 aa5.46□□□□□ -1.54
HDGFL3-204ENST00000563790 TCAPO15273 167 aa5.45□□□□□ -1.54
HDGFL3-204ENST00000563790 RIGQ13278 110 aa5.45□□□□□ -1.54
HDGFL3-204ENST00000563790 ZC2HC1BQ5TFG8 222 aa5.45□□□□□ -1.54
HDGFL3-204ENST00000563790 MRPL55Q7Z7F7 128 aaKnown RBP5.45□□□□□ -1.54
HDGFL3-204ENST00000563790 SLC51BQ86UW2 128 aa5.45□□□□□ -1.54
HDGFL3-204ENST00000563790 SMIM27A0A1W2PRY6 76 aa5.44□□□□□ -1.54
HDGFL3-204ENST00000563790 FAM74A3Q4VXF1 159 aa5.44□□□□□ -1.54
HDGFL3-204ENST00000563790 FAM19A3Q7Z5A8 133 aa5.44□□□□□ -1.54
HDGFL3-204ENST00000563790 LINC00167Q96N53 147 aa5.44□□□□□ -1.54
HDGFL3-204ENST00000563790 SMIM7Q9BQ49 75 aa5.44□□□□□ -1.54
HDGFL3-204ENST00000563790 A0A1B0GXF2 115 aa5.43□□□□□ -1.54
HDGFL3-204ENST00000563790 D6R8Y8 96 aa5.43□□□□□ -1.54
HDGFL3-204ENST00000563790 SPINK1P00995 79 aa5.43□□□□□ -1.54
HDGFL3-204ENST00000563790 SPRR2DP22532 72 aa5.43□□□□□ -1.54
HDGFL3-204ENST00000563790 LBHQ53QV2 105 aaPredicted RBP5.43□□□□□ -1.54
HDGFL3-204ENST00000563790 Q8IZM0 81 aa5.43□□□□□ -1.54
HDGFL3-204ENST00000563790 AMELXQ99217 191 aa5.43□□□□□ -1.54
HDGFL3-204ENST00000563790 IGLV5-37A0A075B6J1 123 aa5.42□□□□□ -1.54
HDGFL3-204ENST00000563790 RPL37AP8A6NKH3 93 aa5.42□□□□□ -1.54
HDGFL3-204ENST00000563790 SRP19P09132 144 aaKnown RBP5.42□□□□□ -1.54
HDGFL3-204ENST00000563790 CKS2P33552 79 aa5.42□□□□□ -1.54
HDGFL3-204ENST00000563790 KRTAP5-10Q6L8G5 202 aa5.42□□□□□ -1.54
HDGFL3-204ENST00000563790 TCTE3Q8IZS6 198 aa5.42□□□□□ -1.54
HDGFL3-204ENST00000563790 Q8N377 158 aa5.42□□□□□ -1.54
HDGFL3-204ENST00000563790 TMEM141Q96I45 108 aa5.42□□□□□ -1.54
HDGFL3-204ENST00000563790 EIF5A2Q9GZV4 153 aaKnown RBP5.42□□□□□ -1.54
HDGFL3-204ENST00000563790 NAT8BQ9UHF3 227 aa5.42□□□□□ -1.54
HDGFL3-204ENST00000563790 CEBPGP53567 150 aa5.41□□□□□ -1.54
HDGFL3-204ENST00000563790 RPL23P62829 140 aaKnown RBP5.41□□□□□ -1.54
HDGFL3-204ENST00000563790 HMCN1Q96RW7 5635 aa5.41□□□□□ -1.54
HDGFL3-204ENST00000563790 IFI27P40305 119 aaPredicted RBP5.4□□□□□ -1.54
HDGFL3-204ENST00000563790 ALKAL2Q6UX46 152 aa5.4□□□□□ -1.54
HDGFL3-204ENST00000563790 C2orf66Q6UXQ4 117 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms