RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 LAMTOR2Q9Y2Q5 125 aa6.77□□□□□ -1.33
GABPB1-210ENST00000560825 TMEM218A2RU14 115 aa6.76□□□□□ -1.33
GABPB1-210ENST00000560825 IGLV7-43P04211 117 aa6.76□□□□□ -1.33
GABPB1-210ENST00000560825 RAB14P61106 215 aa6.76□□□□□ -1.33
GABPB1-210ENST00000560825 REG3GQ6UW15 175 aa6.76□□□□□ -1.33
GABPB1-210ENST00000560825 FAM19A3Q7Z5A8 133 aa6.76□□□□□ -1.33
GABPB1-210ENST00000560825 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
GABPB1-210ENST00000560825 CTDSP1Q9GZU7 261 aa6.76□□□□□ -1.33
GABPB1-210ENST00000560825 TOMM7Q9P0U1 55 aa6.76□□□□□ -1.33
GABPB1-210ENST00000560825 M0QXV9 152 aa6.75□□□□□ -1.33
GABPB1-210ENST00000560825 KRTAP1-4P0C5Y4 121 aa6.75□□□□□ -1.33
GABPB1-210ENST00000560825 ORMDL2Q53FV1 153 aa6.75□□□□□ -1.33
GABPB1-210ENST00000560825 TOMM6Q96B49 74 aa6.75□□□□□ -1.33
GABPB1-210ENST00000560825 VCX2Q9H322 139 aa6.75□□□□□ -1.33
GABPB1-210ENST00000560825 XAGE1AQ9HD64 81 aa6.75□□□□□ -1.33
GABPB1-210ENST00000560825 TRBV30A0A0K0K1B3 111 aa6.74□□□□□ -1.33
GABPB1-210ENST00000560825 NDUFC2-KCTD14E9PQ53 114 aa6.74□□□□□ -1.33
GABPB1-210ENST00000560825 F8WDY8 70 aa6.74□□□□□ -1.33
GABPB1-210ENST00000560825 ALKBH7Q9BT30 221 aaPredicted RBP6.74□□□□□ -1.33
GABPB1-210ENST00000560825 URB1-AS1Q96HZ7 61 aa6.73□□□□□ -1.33
GABPB1-210ENST00000560825 C2orf88Q9BSF0 95 aa6.73□□□□□ -1.33
GABPB1-210ENST00000560825 NXT2Q9NPJ8 142 aaKnown RBP6.73□□□□□ -1.33
GABPB1-210ENST00000560825 SMIM1B2RUZ4 78 aa6.72□□□□□ -1.33
GABPB1-210ENST00000560825 Q6ZN92 141 aa6.72□□□□□ -1.33
GABPB1-210ENST00000560825 A0A096LNJ9 63 aa6.71□□□□□ -1.34
GABPB1-210ENST00000560825 LINC01546A6NGU7 62 aa6.71□□□□□ -1.34
GABPB1-210ENST00000560825 H0Y9J4 135 aa6.71□□□□□ -1.34
GABPB1-210ENST00000560825 COMMD7Q86VX2 200 aa6.71□□□□□ -1.34
GABPB1-210ENST00000560825 Q8IZM0 81 aa6.71□□□□□ -1.34
GABPB1-210ENST00000560825 LINC01561Q8N1V8 128 aa6.71□□□□□ -1.34
GABPB1-210ENST00000560825 TIMM17AQ99595 171 aa6.71□□□□□ -1.34
GABPB1-210ENST00000560825 C6orf226Q5I0X4 101 aa6.7□□□□□ -1.34
GABPB1-210ENST00000560825 C10orf91Q5T1B1 145 aa6.7□□□□□ -1.34
GABPB1-210ENST00000560825 UQCC3Q6UW78 93 aa6.7□□□□□ -1.34
GABPB1-210ENST00000560825 PACRGQ96M98 296 aaPredicted RBP6.7□□□□□ -1.34
GABPB1-210ENST00000560825 SCGB3A1Q96QR1 104 aa6.7□□□□□ -1.34
GABPB1-210ENST00000560825 SEC11CQ9BY50 192 aa6.7□□□□□ -1.34
GABPB1-210ENST00000560825 K7EMI3 77 aa6.69□□□□□ -1.34
GABPB1-210ENST00000560825 SPINK8P0C7L1 97 aa6.69□□□□□ -1.34
GABPB1-210ENST00000560825 UBE2BP63146 152 aa6.69□□□□□ -1.34
GABPB1-210ENST00000560825 ERASQ7Z444 233 aa6.69□□□□□ -1.34
GABPB1-210ENST00000560825 GNB1LQ9BYB4 327 aa6.69□□□□□ -1.34
GABPB1-210ENST00000560825 C22orf24Q9Y442 160 aa6.69□□□□□ -1.34
GABPB1-210ENST00000560825 IGLV5-45A0A087WSX0 123 aa6.68□□□□□ -1.34
GABPB1-210ENST00000560825 SCO1O75880 301 aa6.68□□□□□ -1.34
GABPB1-210ENST00000560825 PRSS2P07478 247 aa6.68□□□□□ -1.34
GABPB1-210ENST00000560825 NPSP0C0P6 89 aa6.68□□□□□ -1.34
GABPB1-210ENST00000560825 CKS1BP61024 79 aa6.68□□□□□ -1.34
GABPB1-210ENST00000560825 HERVK_113P63121 156 aa6.68□□□□□ -1.34
GABPB1-210ENST00000560825 PMCHL1Q16048 86 aa6.68□□□□□ -1.34
GABPB1-210ENST00000560825 CST9LQ9H4G1 147 aa6.68□□□□□ -1.34
GABPB1-210ENST00000560825 F8VRH5 84 aa6.67□□□□□ -1.34
GABPB1-210ENST00000560825 DIRC1Q969H9 104 aa6.67□□□□□ -1.34
GABPB1-210ENST00000560825 GEMIN7Q9H840 131 aaKnown RBP6.67□□□□□ -1.34
GABPB1-210ENST00000560825 MUC2Q02817 5179 aa6.67□□□□□ -1.34
GABPB1-210ENST00000560825 TRAV9-1A0A075B6T8 112 aa6.67□□□□□ -1.34
GABPB1-210ENST00000560825 TINCRA0A1B0GVN0 87 aa6.67□□□□□ -1.34
GABPB1-210ENST00000560825 RAB5BP61020 215 aa6.67□□□□□ -1.34
GABPB1-210ENST00000560825 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
GABPB1-210ENST00000560825 RPL37AP8A6NKH3 93 aa6.66□□□□□ -1.34
GABPB1-210ENST00000560825 FABP9Q0Z7S8 132 aa6.66□□□□□ -1.34
GABPB1-210ENST00000560825 Q8NDZ9 215 aa6.66□□□□□ -1.34
GABPB1-210ENST00000560825 RPS10P5Q9NQ39 176 aa6.66□□□□□ -1.34
GABPB1-210ENST00000560825 CARHSP1Q9Y2V2 147 aaKnown RBP6.66□□□□□ -1.34
GABPB1-210ENST00000560825 C18orf32Q8TCD1 76 aa6.65□□□□□ -1.35
GABPB1-210ENST00000560825 A0A087X002 238 aa6.64□□□□□ -1.35
GABPB1-210ENST00000560825 GAGE10A6NGK3 116 aa6.64□□□□□ -1.35
GABPB1-210ENST00000560825 PMVKQ15126 192 aa6.64□□□□□ -1.35
GABPB1-210ENST00000560825 PDZD11Q5EBL8 140 aa6.64□□□□□ -1.35
GABPB1-210ENST00000560825 LINC00167Q96N53 147 aa6.64□□□□□ -1.35
GABPB1-210ENST00000560825 KRTAP4-11Q9BYQ6 195 aa6.64□□□□□ -1.35
GABPB1-210ENST00000560825 ANAPC11Q9NYG5 84 aa6.64□□□□□ -1.35
GABPB1-210ENST00000560825 ZNF861PO60384 105 aa6.63□□□□□ -1.35
GABPB1-210ENST00000560825 S100PP25815 95 aa6.63□□□□□ -1.35
GABPB1-210ENST00000560825 SEC11AP67812 179 aa6.63□□□□□ -1.35
GABPB1-210ENST00000560825 PAPPA-AS1Q5QFB9 102 aa6.63□□□□□ -1.35
GABPB1-210ENST00000560825 MRPL55Q7Z7F7 128 aaKnown RBP6.63□□□□□ -1.35
GABPB1-210ENST00000560825 ZNF22P17026 224 aaPredicted RBP6.62□□□□□ -1.35
GABPB1-210ENST00000560825 FA2HQ7L5A8 372 aa6.62□□□□□ -1.35
GABPB1-210ENST00000560825 IGLV5-39A0A0G2JS06 123 aa6.61□□□□□ -1.35
GABPB1-210ENST00000560825 IGLC3P0DOY3 106 aa6.61□□□□□ -1.35
GABPB1-210ENST00000560825 RHEBQ15382 184 aa6.61□□□□□ -1.35
GABPB1-210ENST00000560825 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
GABPB1-210ENST00000560825 G0S2P27469 103 aa6.6□□□□□ -1.35
GABPB1-210ENST00000560825 PFN2P35080 140 aa6.6□□□□□ -1.35
GABPB1-210ENST00000560825 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
GABPB1-210ENST00000560825 YPEL4Q96NS1 127 aa6.6□□□□□ -1.35
GABPB1-210ENST00000560825 SMCO4Q9NRQ5 59 aa6.6□□□□□ -1.35
GABPB1-210ENST00000560825 TRAPPC1Q9Y5R8 145 aa6.6□□□□□ -1.35
GABPB1-210ENST00000560825 IGLV1-50A0A075B6I6 118 aa6.59□□□□□ -1.35
GABPB1-210ENST00000560825 C11orf86A6NJI1 115 aa6.59□□□□□ -1.35
GABPB1-210ENST00000560825 LINC00614P0C842 121 aa6.59□□□□□ -1.35
GABPB1-210ENST00000560825 CXCL5P42830 114 aa6.59□□□□□ -1.35
GABPB1-210ENST00000560825 NDUFA6P56556 154 aa6.59□□□□□ -1.35
GABPB1-210ENST00000560825 ZNF625Q96I27 306 aaPredicted RBP6.59□□□□□ -1.35
GABPB1-210ENST00000560825 IGKV2-28A0A075B6P5 120 aa6.59□□□□□ -1.36
GABPB1-210ENST00000560825 BCE1O60756 84 aa6.59□□□□□ -1.36
GABPB1-210ENST00000560825 IGKV2D-28P01615 120 aa6.59□□□□□ -1.36
GABPB1-210ENST00000560825 APOC3P02656 99 aa6.59□□□□□ -1.36
GABPB1-210ENST00000560825 KRTAP13-2Q52LG2 175 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms