RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 RAB14P61106 215 aa11.15□□□□□ -0.62
TPM1-224ENST00000560615 IGIPA6NJ69 53 aa11.14□□□□□ -0.63
TPM1-224ENST00000560615 CXCL5P42830 114 aa11.14□□□□□ -0.63
TPM1-224ENST00000560615 F8VRH5 84 aa11.13□□□□□ -0.63
TPM1-224ENST00000560615 KRTAP1-4P0C5Y4 121 aa11.13□□□□□ -0.63
TPM1-224ENST00000560615 LINC00173Q6ZV60 143 aa11.13□□□□□ -0.63
TPM1-224ENST00000560615 C22orf24Q9Y442 160 aa11.13□□□□□ -0.63
TPM1-224ENST00000560615 ZC2HC1BQ5TFG8 222 aa11.12□□□□□ -0.63
TPM1-224ENST00000560615 LINC00469Q8N7U9 141 aa11.12□□□□□ -0.63
TPM1-224ENST00000560615 TIMM17AQ99595 171 aa11.12□□□□□ -0.63
TPM1-224ENST00000560615 LINC01549A6NIU2 74 aa11.11□□□□□ -0.63
TPM1-224ENST00000560615 PRR4Q16378 134 aa11.11□□□□□ -0.63
TPM1-224ENST00000560615 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
TPM1-224ENST00000560615 TP73-AS1Q9UF72 201 aa11.11□□□□□ -0.63
TPM1-224ENST00000560615 RPL28P46779 137 aaKnown RBP11.1□□□□□ -0.63
TPM1-224ENST00000560615 CDKN2A-AS1Q9UH64 79 aa11.1□□□□□ -0.63
TPM1-224ENST00000560615 TOMM6Q96B49 74 aa11.09□□□□□ -0.63
TPM1-224ENST00000560615 ERASQ7Z444 233 aa11.08□□□□□ -0.64
TPM1-224ENST00000560615 MRPL55Q7Z7F7 128 aaKnown RBP11.08□□□□□ -0.64
TPM1-224ENST00000560615 SCGB3A1Q96QR1 104 aa11.07□□□□□ -0.64
TPM1-224ENST00000560615 PDZD11Q5EBL8 140 aa11.06□□□□□ -0.64
TPM1-224ENST00000560615 BCE1O60756 84 aa11.05□□□□□ -0.64
TPM1-224ENST00000560615 COX7B2Q8TF08 81 aa11.04□□□□□ -0.64
TPM1-224ENST00000560615 TRAV9-1A0A075B6T8 112 aa11.03□□□□□ -0.64
TPM1-224ENST00000560615 TINCRA0A1B0GVN0 87 aa11.03□□□□□ -0.64
TPM1-224ENST00000560615 CRYGAP11844 174 aa11.03□□□□□ -0.64
TPM1-224ENST00000560615 SMIM1B2RUZ4 78 aa11.01□□□□□ -0.65
TPM1-224ENST00000560615 KIAA1644Q3SXP7 199 aa11.01□□□□□ -0.65
TPM1-224ENST00000560615 A0A0U1RQV1 116 aa11□□□□□ -0.65
TPM1-224ENST00000560615 S100PP25815 95 aa11□□□□□ -0.65
TPM1-224ENST00000560615 NKAPP1Q8N9T2 125 aa11□□□□□ -0.65
TPM1-224ENST00000560615 TYMSOSQ8TAI1 123 aa11□□□□□ -0.65
TPM1-224ENST00000560615 LINC00167Q96N53 147 aa11□□□□□ -0.65
TPM1-224ENST00000560615 MRPL18Q9H0U6 180 aaKnown RBP11□□□□□ -0.65
TPM1-224ENST00000560615 H3BRM9 83 aa10.99□□□□□ -0.65
TPM1-224ENST00000560615 IGLV5-45A0A087WSX0 123 aa10.98□□□□□ -0.65
TPM1-224ENST00000560615 RPL37AP8A6NKH3 93 aa10.98□□□□□ -0.65
TPM1-224ENST00000560615 ATP5LO75964 103 aa10.98□□□□□ -0.65
TPM1-224ENST00000560615 TSPAN13O95857 204 aa10.98□□□□□ -0.65
TPM1-224ENST00000560615 UBE2AP49459 152 aa10.98□□□□□ -0.65
TPM1-224ENST00000560615 COX19Q49B96 90 aa10.98□□□□□ -0.65
TPM1-224ENST00000560615 RAB5BP61020 215 aa10.97□□□□□ -0.65
TPM1-224ENST00000560615 PMVKQ15126 192 aa10.97□□□□□ -0.65
TPM1-224ENST00000560615 GNB1LQ9BYB4 327 aa10.97□□□□□ -0.65
TPM1-224ENST00000560615 CST9LQ9H4G1 147 aa10.97□□□□□ -0.65
TPM1-224ENST00000560615 SMCO4Q9NRQ5 59 aa10.97□□□□□ -0.65
TPM1-224ENST00000560615 LPAP08519 4548 aa10.96□□□□□ -0.65
TPM1-224ENST00000560615 UQCC3Q6UW78 93 aa10.96□□□□□ -0.65
TPM1-224ENST00000560615 FA2HQ7L5A8 372 aa10.96□□□□□ -0.65
TPM1-224ENST00000560615 IGLV5-37A0A075B6J1 123 aa10.95□□□□□ -0.66
TPM1-224ENST00000560615 GAGE10A6NGK3 116 aa10.95□□□□□ -0.66
TPM1-224ENST00000560615 ADCYAP1P18509 176 aa10.95□□□□□ -0.66
TPM1-224ENST00000560615 CLLU1Q5K131 121 aa10.95□□□□□ -0.66
TPM1-224ENST00000560615 LINC01546A6NGU7 62 aa10.94□□□□□ -0.66
TPM1-224ENST00000560615 SPINK8P0C7L1 97 aa10.94□□□□□ -0.66
TPM1-224ENST00000560615 A0A087X002 238 aa10.93□□□□□ -0.66
TPM1-224ENST00000560615 TMEM218A2RU14 115 aa10.91□□□□□ -0.66
TPM1-224ENST00000560615 FAM229BQ4G0N7 80 aa10.91□□□□□ -0.66
TPM1-224ENST00000560615 RPL24P83731 157 aaKnown RBP10.9□□□□□ -0.66
TPM1-224ENST00000560615 PFN2P35080 140 aa10.89□□□□□ -0.67
TPM1-224ENST00000560615 NDUFA6P56556 154 aa10.89□□□□□ -0.67
TPM1-224ENST00000560615 FABP9Q0Z7S8 132 aa10.89□□□□□ -0.67
TPM1-224ENST00000560615 IGKV2-28A0A075B6P5 120 aa10.88□□□□□ -0.67
TPM1-224ENST00000560615 IGKV2D-26A0A0A0MRZ7 120 aa10.88□□□□□ -0.67
TPM1-224ENST00000560615 IGKV2D-28P01615 120 aa10.88□□□□□ -0.67
TPM1-224ENST00000560615 COX17Q14061 63 aa10.88□□□□□ -0.67
TPM1-224ENST00000560615 SFTA2Q6UW10 78 aa10.88□□□□□ -0.67
TPM1-224ENST00000560615 SEC11CQ9BY50 192 aa10.88□□□□□ -0.67
TPM1-224ENST00000560615 CTAG1AP78358 180 aa10.87□□□□□ -0.67
TPM1-224ENST00000560615 IGLC3P0DOY3 106 aa10.86□□□□□ -0.67
TPM1-224ENST00000560615 KRTAP13-1Q8IUC0 172 aa10.86□□□□□ -0.67
TPM1-224ENST00000560615 LINC00304Q8N9R0 145 aa10.86□□□□□ -0.67
TPM1-224ENST00000560615 FAM19A1Q7Z5A9 133 aa10.85□□□□□ -0.67
TPM1-224ENST00000560615 ANAPC11Q9NYG5 84 aa10.85□□□□□ -0.67
TPM1-224ENST00000560615 ERG28Q9UKR5 140 aa10.85□□□□□ -0.67
TPM1-224ENST00000560615 IGLV5-39A0A0G2JS06 123 aa10.84□□□□□ -0.67
TPM1-224ENST00000560615 TMEM126AQ9H061 195 aa10.83□□□□□ -0.68
TPM1-224ENST00000560615 SND1-IT1Q9HBX3 110 aa10.83□□□□□ -0.68
TPM1-224ENST00000560615 VPREB1P12018 145 aa10.82□□□□□ -0.68
TPM1-224ENST00000560615 HBDP02042 147 aa10.81□□□□□ -0.68
TPM1-224ENST00000560615 LINC00614P0C842 121 aa10.81□□□□□ -0.68
TPM1-224ENST00000560615 ZNF22P17026 224 aaPredicted RBP10.81□□□□□ -0.68
TPM1-224ENST00000560615 PRLHP81277 87 aa10.81□□□□□ -0.68
TPM1-224ENST00000560615 KRTAP13-2Q52LG2 175 aa10.81□□□□□ -0.68
TPM1-224ENST00000560615 SCO1O75880 301 aa10.8□□□□□ -0.68
TPM1-224ENST00000560615 RHEBQ15382 184 aa10.8□□□□□ -0.68
TPM1-224ENST00000560615 RPS10P5Q9NQ39 176 aa10.8□□□□□ -0.68
TPM1-224ENST00000560615 TMEM170BQ5T4T1 132 aa10.79□□□□□ -0.68
TPM1-224ENST00000560615 CDIP1Q9H305 208 aa10.79□□□□□ -0.68
TPM1-224ENST00000560615 BAGE3Q86Y29 109 aa10.78□□□□□ -0.68
TPM1-224ENST00000560615 CBLN2Q8IUK8 224 aa10.78□□□□□ -0.68
TPM1-224ENST00000560615 ZNF625Q96I27 306 aaPredicted RBP10.78□□□□□ -0.68
TPM1-224ENST00000560615 TRAPPC1Q9Y5R8 145 aa10.78□□□□□ -0.68
TPM1-224ENST00000560615 TMEM238C9JI98 176 aa10.77□□□□□ -0.69
TPM1-224ENST00000560615 M0R378 163 aa10.76□□□□□ -0.69
TPM1-224ENST00000560615 LINC00158P58513 81 aa10.76□□□□□ -0.69
TPM1-224ENST00000560615 SPAG11AQ6PDA7 123 aa10.76□□□□□ -0.69
TPM1-224ENST00000560615 RETNLBQ9BQ08 111 aa10.76□□□□□ -0.69
TPM1-224ENST00000560615 IGLV7-46A0A075B6I9 117 aa10.75□□□□□ -0.69
TPM1-224ENST00000560615 ATP6V1G1O75348 118 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms