RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 ZNF818PQ6ZRF7 136 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 FAM213BQ8TBF2 198 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 MYOZ3Q8TDC0 251 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 TMEM14BQ9NUH8 114 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 BET1LQ9NYM9 111 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 AP4S1Q9Y587 144 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 CUBNO60494 3623 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 ABCA8O94911 1581 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 SPTBN2O15020 2390 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 WNK1Q9H4A3 2382 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 ADGRG4Q8IZF6 3080 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 SCAPERQ9BY12 1400 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 DSPP15924 2871 aaKnown RBP0.55□□□□□ -2.32
USP8-211ENST00000560527 MARF1Q9Y4F3 1742 aaKnown RBP0.55□□□□□ -2.32
USP8-211ENST00000560527 MAGI1Q96QZ7 1491 aaPredicted RBP0.55□□□□□ -2.32
USP8-211ENST00000560527 MAGI3Q5TCQ9 1506 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 A0A087WTM6 91 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 TRBV7-1A0A0A6YYK4 115 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 PPP1R17O96001 155 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 ZNF137PP52743 207 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 ATP5EP56381 51 aaPredicted RBP0.55□□□□□ -2.32
USP8-211ENST00000560527 EDDM3BP56851 147 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 GNG2P59768 71 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 UBA52P62987 128 aaKnown RBP0.55□□□□□ -2.32
USP8-211ENST00000560527 SPINK9Q5DT21 86 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 SPATA8Q6RVD6 105 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 SFTA2Q6UW10 78 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 VAMP8Q9BV40 100 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 CYP4F30PQ9H0H9 118 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 Q9H521 79 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 MANBALQ9NQG1 85 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 V9GYV3 84 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 DCHS2Q6V1P9 2916 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 PTPRQQ9UMZ3 2332 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 CROCC2H7BZ55 1655 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 PRDM2Q13029 1718 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 ANKRD26Q9UPS8 1709 aa0.55□□□□□ -2.32
USP8-211ENST00000560527 MAP1AP78559 2803 aaPredicted RBP0.55□□□□□ -2.32
USP8-211ENST00000560527 GOLGA3Q08378 1498 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 VPS13CQ709C8 3753 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 ARHGAP5Q13017 1502 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 TRIOO75962 3097 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 LAMA1P25391 3075 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 ATMQ13315 3056 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 UGGT1Q9NYU2 1555 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 DMBT1Q9UGM3 2413 aaPredicted RBP0.54□□□□□ -2.32
USP8-211ENST00000560527 TRBV7-3A0A075B6L6 115 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 TRGV1A0A0A0MS02 117 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 CHKB-CPT1BH3BT56 60 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 RPL37P61927 97 aaKnown RBP0.54□□□□□ -2.32
USP8-211ENST00000560527 SEC11AP67812 179 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 SPAG11BQ08648 103 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 SPINK13Q1W4C9 94 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 LELP1Q5T871 98 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 SPAG11AQ6PDA7 123 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 PMCHL2Q9BQD1 86 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 DPY30Q9C005 99 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 C10orf95Q9H7T3 257 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 SCP2D1Q9UJQ7 156 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 KIAA0100Q14667 2235 aaKnown RBP0.54□□□□□ -2.32
USP8-211ENST00000560527 ABCA1O95477 2261 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 ZNF236Q9UL36 1845 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 ZNF609O15014 1411 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 ATP10BO94823 1461 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 PXDNQ92626 1479 aa0.54□□□□□ -2.32
USP8-211ENST00000560527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.54□□□□□ -2.32
USP8-211ENST00000560527 SSC5DA1L4H1 1573 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 PI4KAP42356 2102 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 NRXN3Q9Y4C0 1643 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 MED13LQ71F56 2210 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 TNRC6CQ9HCJ0 1690 aaKnown RBP0.53□□□□□ -2.32
USP8-211ENST00000560527 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.53□□□□□ -2.32
USP8-211ENST00000560527 NAP1L6A6NFF2 107 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 CRYM-AS1A6NIL9 109 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 H3BQ15 152 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 LINC00032P0C843 101 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 ACYP2P14621 99 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 FAUP35544 74 aaKnown RBP0.53□□□□□ -2.32
USP8-211ENST00000560527 Q0VG73 95 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 Q5VV11 94 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 PPP1R1CQ8WVI7 109 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 Q96NJ1 140 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 MGST2Q99735 147 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 PRO1933Q9H354 126 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 DYNLRB1Q9NP97 96 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 NDUFA4L2Q9NRX3 87 aa0.53□□□□□ -2.32
USP8-211ENST00000560527 DMDP11532 3685 aa0.53□□□□□ -2.33
USP8-211ENST00000560527 ACANP16112 2415 aa0.53□□□□□ -2.33
USP8-211ENST00000560527 BTAF1O14981 1849 aa0.52□□□□□ -2.33
USP8-211ENST00000560527 MGAQ8IWI9 3026 aa0.52□□□□□ -2.33
USP8-211ENST00000560527 USH2AO75445 5202 aa0.52□□□□□ -2.33
USP8-211ENST00000560527 CSPG4Q6UVK1 2322 aa0.52□□□□□ -2.33
USP8-211ENST00000560527 CACNA1HO95180 2353 aa0.52□□□□□ -2.33
USP8-211ENST00000560527 A0A096LNT2 108 aa0.52□□□□□ -2.33
USP8-211ENST00000560527 TRAV22A0A0B4J277 110 aa0.52□□□□□ -2.33
USP8-211ENST00000560527 A0A0G2JND7 137 aa0.52□□□□□ -2.33
USP8-211ENST00000560527 CTXND1A0A1B0GTU2 59 aa0.52□□□□□ -2.33
USP8-211ENST00000560527 M0R135 149 aa0.52□□□□□ -2.33
USP8-211ENST00000560527 HMGN4O00479 90 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms