RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 PFN2P35080 140 aa7.33□□□□□ -1.24
SNRPA1-211ENST00000560433 STARD9Q9P2P6 4700 aa7.33□□□□□ -1.24
SNRPA1-211ENST00000560433 DNAH10Q8IVF4 4471 aa7.33□□□□□ -1.24
SNRPA1-211ENST00000560433 C9orf118A6NHY6 69 aa7.33□□□□□ -1.24
SNRPA1-211ENST00000560433 C6orf223Q8N319 242 aa7.33□□□□□ -1.24
SNRPA1-211ENST00000560433 Q9HAA7 133 aa7.33□□□□□ -1.24
SNRPA1-211ENST00000560433 H7C2G1 150 aa7.32□□□□□ -1.24
SNRPA1-211ENST00000560433 MIAQ16674 131 aa7.32□□□□□ -1.24
SNRPA1-211ENST00000560433 DNAH1Q9P2D7 4330 aa7.31□□□□□ -1.24
SNRPA1-211ENST00000560433 C9orf116Q5BN46 136 aaPredicted RBP7.31□□□□□ -1.24
SNRPA1-211ENST00000560433 SOSTDC1Q6X4U4 206 aa7.31□□□□□ -1.24
SNRPA1-211ENST00000560433 C15orf53Q8NAA6 179 aa7.31□□□□□ -1.24
SNRPA1-211ENST00000560433 PGPEP1Q9NXJ5 209 aa7.31□□□□□ -1.24
SNRPA1-211ENST00000560433 CIRBPQ14011 172 aaKnown RBP7.31□□□□□ -1.24
SNRPA1-211ENST00000560433 TGP01266 2768 aa7.31□□□□□ -1.24
SNRPA1-211ENST00000560433 LINC00158P58513 81 aa7.3□□□□□ -1.24
SNRPA1-211ENST00000560433 SPANXDQ9BXN6 97 aa7.3□□□□□ -1.24
SNRPA1-211ENST00000560433 SPANXCQ9NY87 97 aa7.3□□□□□ -1.24
SNRPA1-211ENST00000560433 CCL18P55774 89 aa7.3□□□□□ -1.24
SNRPA1-211ENST00000560433 RPL24P83731 157 aaKnown RBP7.3□□□□□ -1.24
SNRPA1-211ENST00000560433 KIAA0087Q14695 138 aa7.3□□□□□ -1.24
SNRPA1-211ENST00000560433 MIR7-3HGQ8N6C7 128 aa7.3□□□□□ -1.24
SNRPA1-211ENST00000560433 IGKV2D-24A0A075B6R9 120 aa7.29□□□□□ -1.24
SNRPA1-211ENST00000560433 A0A1B0GWB2 263 aa7.29□□□□□ -1.24
SNRPA1-211ENST00000560433 CKS1BP61024 79 aa7.29□□□□□ -1.24
SNRPA1-211ENST00000560433 HIGD2BQ4VC39 106 aa7.29□□□□□ -1.24
SNRPA1-211ENST00000560433 LINC01556Q5JQF7 62 aa7.29□□□□□ -1.24
SNRPA1-211ENST00000560433 LINC00308Q8TCZ7 52 aa7.29□□□□□ -1.24
SNRPA1-211ENST00000560433 A0A1W2PPM0 123 aa7.29□□□□□ -1.24
SNRPA1-211ENST00000560433 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
SNRPA1-211ENST00000560433 Q8IZM0 81 aa7.29□□□□□ -1.24
SNRPA1-211ENST00000560433 TSPAN13O95857 204 aa7.28□□□□□ -1.24
SNRPA1-211ENST00000560433 HERV-K104P63124 156 aa7.28□□□□□ -1.24
SNRPA1-211ENST00000560433 DYNC2H1Q8NCM8 4307 aaKnown RBP7.28□□□□□ -1.24
SNRPA1-211ENST00000560433 UNQ6190/PRO20217Q6UXQ8 127 aa7.28□□□□□ -1.24
SNRPA1-211ENST00000560433 FBN3Q75N90 2809 aa7.28□□□□□ -1.24
SNRPA1-211ENST00000560433 TIMM17BO60830 172 aa7.27□□□□□ -1.25
SNRPA1-211ENST00000560433 SPAG11BQ08648 103 aa7.27□□□□□ -1.25
SNRPA1-211ENST00000560433 UBE2V1Q13404 147 aa7.27□□□□□ -1.25
SNRPA1-211ENST00000560433 LOC107984156A0A0G2JMH3 177 aa7.27□□□□□ -1.25
SNRPA1-211ENST00000560433 GAGE10A6NGK3 116 aa7.27□□□□□ -1.25
SNRPA1-211ENST00000560433 DNAH10OSP0CZ25 163 aa7.27□□□□□ -1.25
SNRPA1-211ENST00000560433 KRTAP26-1Q6PEX3 210 aa7.27□□□□□ -1.25
SNRPA1-211ENST00000560433 ARL17AQ8IVW1 177 aa7.27□□□□□ -1.25
SNRPA1-211ENST00000560433 C1orf43Q9BWL3 253 aa7.27□□□□□ -1.25
SNRPA1-211ENST00000560433 PRO1854Q9UHT4 67 aa7.27□□□□□ -1.25
SNRPA1-211ENST00000560433 ERG28Q9UKR5 140 aa7.27□□□□□ -1.25
SNRPA1-211ENST00000560433 TRAV8-4A0A0B4J246 113 aa7.26□□□□□ -1.25
SNRPA1-211ENST00000560433 SPCS1Q9Y6A9 102 aa7.26□□□□□ -1.25
SNRPA1-211ENST00000560433 FABP2P12104 132 aa7.26□□□□□ -1.25
SNRPA1-211ENST00000560433 CASC10Q5T4H9 136 aa7.26□□□□□ -1.25
SNRPA1-211ENST00000560433 MTURNQ8N3F0 131 aa7.26□□□□□ -1.25
SNRPA1-211ENST00000560433 Q1RN00 199 aa7.25□□□□□ -1.25
SNRPA1-211ENST00000560433 APLNQ9ULZ1 77 aa7.25□□□□□ -1.25
SNRPA1-211ENST00000560433 NHLRC4P0CG21 123 aaPredicted RBP7.24□□□□□ -1.25
SNRPA1-211ENST00000560433 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 IBA57-AS1B1ANH7 110 aa7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 LECT2O14960 151 aa7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 IFITM1P13164 125 aa7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 UBE2DNLQ8IWF7 75 aa7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 LINC01561Q8N1V8 128 aa7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 KRTAP1-5Q9BYS1 174 aa7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 KLK5Q9Y337 293 aaPredicted RBP7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 H3BMG7 143 aa7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 C15orf56Q8N910 161 aa7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 KMT2AQ03164 3969 aa7.23□□□□□ -1.25
SNRPA1-211ENST00000560433 K7EP34 96 aa7.22□□□□□ -1.25
SNRPA1-211ENST00000560433 PSMB2P49721 201 aa7.22□□□□□ -1.25
SNRPA1-211ENST00000560433 ZNF561-AS1K7EIQ3 104 aa7.22□□□□□ -1.25
SNRPA1-211ENST00000560433 RPL13AP40429 203 aaKnown RBP7.22□□□□□ -1.25
SNRPA1-211ENST00000560433 SND1-IT1Q9HBX3 110 aa7.22□□□□□ -1.25
SNRPA1-211ENST00000560433 SCGB1C2P0DMR2 95 aa7.21□□□□□ -1.25
SNRPA1-211ENST00000560433 PCP4P48539 62 aa7.21□□□□□ -1.25
SNRPA1-211ENST00000560433 IGKV2-28A0A075B6P5 120 aa7.2□□□□□ -1.26
SNRPA1-211ENST00000560433 IGKV2D-28P01615 120 aa7.2□□□□□ -1.26
SNRPA1-211ENST00000560433 NTN5Q8WTR8 489 aaPredicted RBP7.2□□□□□ -1.26
SNRPA1-211ENST00000560433 CAMK2N2Q96S95 79 aa7.2□□□□□ -1.26
SNRPA1-211ENST00000560433 C6orf48Q9UBA6 75 aa7.2□□□□□ -1.26
SNRPA1-211ENST00000560433 CXCL5P42830 114 aa7.2□□□□□ -1.26
SNRPA1-211ENST00000560433 GTF2H5Q6ZYL4 71 aa7.2□□□□□ -1.26
SNRPA1-211ENST00000560433 LINC00337Q8N6G1 96 aa7.2□□□□□ -1.26
SNRPA1-211ENST00000560433 UPK3BQ9BT76 320 aa7.2□□□□□ -1.26
SNRPA1-211ENST00000560433 TRIAP1O43715 76 aa7.19□□□□□ -1.26
SNRPA1-211ENST00000560433 Q6ZRU5 148 aa7.19□□□□□ -1.26
SNRPA1-211ENST00000560433 Q8NDZ9 215 aa7.19□□□□□ -1.26
SNRPA1-211ENST00000560433 TCL1BO95988 128 aa7.19□□□□□ -1.26
SNRPA1-211ENST00000560433 XAGE1AQ9HD64 81 aa7.19□□□□□ -1.26
SNRPA1-211ENST00000560433 NUPR2A6NF83 97 aa7.18□□□□□ -1.26
SNRPA1-211ENST00000560433 USP17L23D6RBM5 183 aa7.16□□□□□ -1.26
SNRPA1-211ENST00000560433 M0R2N4 97 aa7.16□□□□□ -1.26
SNRPA1-211ENST00000560433 SLPIP03973 132 aa7.16□□□□□ -1.26
SNRPA1-211ENST00000560433 WFDC2Q14508 124 aa7.16□□□□□ -1.26
SNRPA1-211ENST00000560433 OR13C6PQ8NH95 151 aa7.16□□□□□ -1.26
SNRPA1-211ENST00000560433 COPS9Q8WXC6 57 aa7.16□□□□□ -1.26
SNRPA1-211ENST00000560433 CLEC2BQ92478 149 aa7.16□□□□□ -1.26
SNRPA1-211ENST00000560433 GAGE2EQ4V326 116 aa7.16□□□□□ -1.26
SNRPA1-211ENST00000560433 GAGE2DQ9UEU5 116 aa7.16□□□□□ -1.26
SNRPA1-211ENST00000560433 NCR3O14931 201 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms