RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PIEZO2Q9H5I5 2752 aa4.09□□□□□ -1.75
SNRPA1-209ENST00000560307 POLEQ07864 2286 aa4.09□□□□□ -1.76
SNRPA1-209ENST00000560307 CACNA1BQ00975 2339 aa4.09□□□□□ -1.76
SNRPA1-209ENST00000560307 SPTBN2O15020 2390 aa4.09□□□□□ -1.76
SNRPA1-209ENST00000560307 TRBV6-8A0A0A6YYG3 113 aa4.08□□□□□ -1.76
SNRPA1-209ENST00000560307 DNAJC9-AS1A6NH13 148 aa4.08□□□□□ -1.76
SNRPA1-209ENST00000560307 RPL35AP18077 110 aaKnown RBP4.08□□□□□ -1.76
SNRPA1-209ENST00000560307 DEFB114Q30KQ6 69 aa4.08□□□□□ -1.76
SNRPA1-209ENST00000560307 C6orf226Q5I0X4 101 aa4.08□□□□□ -1.76
SNRPA1-209ENST00000560307 C1orf158Q8N1D5 194 aa4.08□□□□□ -1.76
SNRPA1-209ENST00000560307 WFDC9Q8NEX5 89 aa4.08□□□□□ -1.76
SNRPA1-209ENST00000560307 C16orf74Q96GX8 76 aa4.08□□□□□ -1.76
SNRPA1-209ENST00000560307 WNK2Q9Y3S1 2297 aa4.08□□□□□ -1.76
SNRPA1-209ENST00000560307 CFAP47Q6ZTR5 3102 aa4.08□□□□□ -1.76
SNRPA1-209ENST00000560307 DOPEY2Q9Y3R5 2298 aa4.07□□□□□ -1.76
SNRPA1-209ENST00000560307 IGHV4-30-2A0A087WSY4 118 aa4.07□□□□□ -1.76
SNRPA1-209ENST00000560307 IGHV4-61A0A0C4DH41 118 aa4.07□□□□□ -1.76
SNRPA1-209ENST00000560307 LINC00959A0A1B0GUT2 108 aa4.07□□□□□ -1.76
SNRPA1-209ENST00000560307 A0A1B0GUV1 79 aa4.07□□□□□ -1.76
SNRPA1-209ENST00000560307 PLA2G2AP14555 144 aa4.07□□□□□ -1.76
SNRPA1-209ENST00000560307 NREPQ16612 68 aa4.07□□□□□ -1.76
SNRPA1-209ENST00000560307 RMI2Q96E14 147 aa4.07□□□□□ -1.76
SNRPA1-209ENST00000560307 TRAV10A0A0B4J240 114 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 LOC100131303A0A0U1RQF7 123 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 PLAC8L1A1L4L8 177 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 B4DSR2 109 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 DSCR9P59020 149 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 ESRGQ1W209 222 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 DEFB123Q8N688 67 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 TMEM254Q8TBM7 123 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 C4orf3Q8WVX3 66 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 C11orf68Q9H3H3 251 aaKnown RBP4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 ESM1Q9NQ30 184 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 EYSQ5T1H1 3165 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 KALRNO60229 2985 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 ROS1P08922 2347 aa4.06□□□□□ -1.76
SNRPA1-209ENST00000560307 MYO15AQ9UKN7 3530 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 IGLV4-60A0A075B6I1 120 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 A0A0U1RQV1 116 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 A0A1B0GW54 56 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 HAMPP81172 84 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 C6orf99Q4VX62 202 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 Q6ZTI0 123 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 PRR15Q8IV56 129 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 ZNF702PQ9H963 129 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 SNURFQ9Y675 71 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 ZDBF2Q9HCK1 2354 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 MED13LQ71F56 2210 aa4.05□□□□□ -1.76
SNRPA1-209ENST00000560307 APC2O95996 2303 aa4.04□□□□□ -1.76
SNRPA1-209ENST00000560307 CDK2AP2O75956 126 aa4.04□□□□□ -1.76
SNRPA1-209ENST00000560307 PRM2P04554 102 aa4.04□□□□□ -1.76
SNRPA1-209ENST00000560307 COX7BP24311 80 aa4.04□□□□□ -1.76
SNRPA1-209ENST00000560307 SEC61GP60059 68 aa4.04□□□□□ -1.76
SNRPA1-209ENST00000560307 KIAA0087Q14695 138 aa4.04□□□□□ -1.76
SNRPA1-209ENST00000560307 DEFB112Q30KQ8 113 aa4.04□□□□□ -1.76
SNRPA1-209ENST00000560307 WFDC11Q8NEX6 87 aa4.04□□□□□ -1.76
SNRPA1-209ENST00000560307 BRK1Q8WUW1 75 aa4.04□□□□□ -1.76
SNRPA1-209ENST00000560307 PKIGQ9Y2B9 76 aa4.04□□□□□ -1.76
SNRPA1-209ENST00000560307 ANKHD1Q8IWZ3 2542 aaKnown RBP4.04□□□□□ -1.76
SNRPA1-209ENST00000560307 TRGV4A0A0C4DH28 118 aa4.03□□□□□ -1.76
SNRPA1-209ENST00000560307 LCE6AA0A183 80 aa4.03□□□□□ -1.76
SNRPA1-209ENST00000560307 BPY2O14599 106 aa4.03□□□□□ -1.76
SNRPA1-209ENST00000560307 IGLV6-57P01721 117 aa4.03□□□□□ -1.76
SNRPA1-209ENST00000560307 FUSP35637 526 aaKnown RBP eCLIP4.03□□□□□ -1.76
SNRPA1-209ENST00000560307 C10orf99Q6UWK7 81 aa4.03□□□□□ -1.76
SNRPA1-209ENST00000560307 SPATA3Q8NHX4 192 aa4.03□□□□□ -1.76
SNRPA1-209ENST00000560307 TM2D3Q9BRN9 247 aa4.03□□□□□ -1.76
SNRPA1-209ENST00000560307 GPR179Q6PRD1 2367 aa4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 TRGV2A0A075B6R0 118 aa4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 GVQW2A0A096LPI5 108 aaPredicted RBP4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 Q1T7F1 81 aa4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 Q6ZRU5 148 aa4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 DIRC1Q969H9 104 aa4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 CCL19Q99731 98 aa4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 OCR1Q9BZK8 76 aa4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 NOP10Q9NPE3 64 aaKnown RBP4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 LINC00474Q9P2X8 69 aa4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 ABCA2Q9BZC7 2435 aa4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 DMXL2Q8TDJ6 3036 aa4.02□□□□□ -1.77
SNRPA1-209ENST00000560307 CELSR3Q9NYQ7 3312 aa4.01□□□□□ -1.77
SNRPA1-209ENST00000560307 A0A0J9YWU9 116 aa4.01□□□□□ -1.77
SNRPA1-209ENST00000560307 IGKV4-1P06312 121 aa4.01□□□□□ -1.77
SNRPA1-209ENST00000560307 Q6ZQY7 126 aa4.01□□□□□ -1.77
SNRPA1-209ENST00000560307 Q6ZTC4 211 aa4.01□□□□□ -1.77
SNRPA1-209ENST00000560307 LINC00612Q8N6U2 182 aa4.01□□□□□ -1.77
SNRPA1-209ENST00000560307 CELA1Q9UNI1 258 aa4.01□□□□□ -1.77
SNRPA1-209ENST00000560307 CNOT1A5YKK6 2376 aaKnown RBP4□□□□□ -1.77
SNRPA1-209ENST00000560307 PRRC2CQ9Y520 2896 aaKnown RBP4□□□□□ -1.77
SNRPA1-209ENST00000560307 CEP250Q9BV73 2442 aa4□□□□□ -1.77
SNRPA1-209ENST00000560307 IGKV3OR2-268A0A0C4DH90 116 aa4□□□□□ -1.77
SNRPA1-209ENST00000560307 C19orf84I3L1E1 186 aa4□□□□□ -1.77
SNRPA1-209ENST00000560307 M0R2N4 97 aa4□□□□□ -1.77
SNRPA1-209ENST00000560307 ELOF1P60002 83 aaKnown RBP4□□□□□ -1.77
SNRPA1-209ENST00000560307 CYP4F30PQ9H0H9 118 aa4□□□□□ -1.77
SNRPA1-209ENST00000560307 hDV103S1A0JD37 113 aa3.99□□□□□ -1.77
SNRPA1-209ENST00000560307 TPRP12270 2363 aaKnown RBP3.99□□□□□ -1.77
SNRPA1-209ENST00000560307 PCNX1Q96RV3 2341 aa3.99□□□□□ -1.77
SNRPA1-209ENST00000560307 SPENQ96T58 3664 aaKnown RBP3.98□□□□□ -1.77
SNRPA1-209ENST00000560307 LYRM9A8MSI8 78 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms