RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ATP5LO75964 103 aa11.78□□□□□ -0.52
CASC4-209ENST00000559222 INAFM2P0DMQ5 153 aa11.78□□□□□ -0.52
CASC4-209ENST00000559222 RNF151Q2KHN1 245 aa11.78□□□□□ -0.52
CASC4-209ENST00000559222 C9orf116Q5BN46 136 aaPredicted RBP11.78□□□□□ -0.52
CASC4-209ENST00000559222 PACRGQ96M98 296 aaPredicted RBP11.78□□□□□ -0.52
CASC4-209ENST00000559222 HSBP1O75506 76 aa11.77□□□□□ -0.53
CASC4-209ENST00000559222 ZNF22P17026 224 aaPredicted RBP11.77□□□□□ -0.53
CASC4-209ENST00000559222 Q8IZM0 81 aa11.77□□□□□ -0.53
CASC4-209ENST00000559222 A0A1W2PNN7 141 aa11.76□□□□□ -0.53
CASC4-209ENST00000559222 F8WDY8 70 aa11.76□□□□□ -0.53
CASC4-209ENST00000559222 Q6ZRP5 223 aa11.76□□□□□ -0.53
CASC4-209ENST00000559222 C11orf86A6NJI1 115 aa11.75□□□□□ -0.53
CASC4-209ENST00000559222 PLA2G1BP04054 148 aaKnown RBP11.75□□□□□ -0.53
CASC4-209ENST00000559222 PRSS2P07478 247 aa11.75□□□□□ -0.53
CASC4-209ENST00000559222 IFI27L1Q96BM0 104 aa11.75□□□□□ -0.53
CASC4-209ENST00000559222 HNRNPA3P51991 378 aaKnown RBP11.74□□□□□ -0.53
CASC4-209ENST00000559222 RPL37AP61513 92 aaKnown RBP11.74□□□□□ -0.53
CASC4-209ENST00000559222 C6orf226Q5I0X4 101 aa11.73□□□□□ -0.53
CASC4-209ENST00000559222 COX7B2Q8TF08 81 aa11.73□□□□□ -0.53
CASC4-209ENST00000559222 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
CASC4-209ENST00000559222 TRBV30A0A0K0K1B3 111 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 FAM168BA1KXE4 195 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 HIST1H2BKO60814 126 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 HIST1H2BJP06899 126 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 TLX1NBP0CAT3 122 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 HIST1H2BOP23527 126 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 HIST1H2BBP33778 126 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 HIST1H2BDP58876 126 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 HIST1H2BCP62807 126 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 HIST2H2BEQ16778 126 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.72□□□□□ -0.53
CASC4-209ENST00000559222 HIST1H2BHQ93079 126 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 HIST1H2BNQ99877 126 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 HIST1H2BMQ99879 126 aa11.72□□□□□ -0.53
CASC4-209ENST00000559222 CKS1BP61024 79 aa11.71□□□□□ -0.53
CASC4-209ENST00000559222 GAGE2EQ4V326 116 aa11.71□□□□□ -0.53
CASC4-209ENST00000559222 LINC00474Q9P2X8 69 aa11.71□□□□□ -0.53
CASC4-209ENST00000559222 GAGE2DQ9UEU5 116 aa11.71□□□□□ -0.53
CASC4-209ENST00000559222 CHTOPQ9Y3Y2 248 aaKnown RBP11.71□□□□□ -0.53
CASC4-209ENST00000559222 FLG2Q5D862 2391 aaPredicted RBP11.7□□□□□ -0.54
CASC4-209ENST00000559222 TRAV12-1A0A0B4J245 112 aa11.69□□□□□ -0.54
CASC4-209ENST00000559222 IGLV5-39A0A0G2JS06 123 aa11.69□□□□□ -0.54
CASC4-209ENST00000559222 H0Y8G0 127 aa11.69□□□□□ -0.54
CASC4-209ENST00000559222 ATP6V1G1O75348 118 aa11.69□□□□□ -0.54
CASC4-209ENST00000559222 KRTAP7-1Q8IUC3 87 aa11.69□□□□□ -0.54
CASC4-209ENST00000559222 F8VRH5 84 aa11.68□□□□□ -0.54
CASC4-209ENST00000559222 H3BRM9 83 aa11.68□□□□□ -0.54
CASC4-209ENST00000559222 FABP4P15090 132 aa11.68□□□□□ -0.54
CASC4-209ENST00000559222 C9orf129Q5T035 196 aaKnown RBP11.68□□□□□ -0.54
CASC4-209ENST00000559222 TMEM170BQ5T4T1 132 aa11.68□□□□□ -0.54
CASC4-209ENST00000559222 MYCBP2O75592 4640 aa11.68□□□□□ -0.54
CASC4-209ENST00000559222 NDUFC2-KCTD14E9PQ53 114 aa11.67□□□□□ -0.54
CASC4-209ENST00000559222 LEPROTL1O95214 131 aa11.67□□□□□ -0.54
CASC4-209ENST00000559222 ODF1Q14990 250 aa11.66□□□□□ -0.54
CASC4-209ENST00000559222 PHF5AQ7RTV0 110 aaKnown RBP11.66□□□□□ -0.54
CASC4-209ENST00000559222 CXCL5P42830 114 aa11.65□□□□□ -0.54
CASC4-209ENST00000559222 FAM19A5Q7Z5A7 132 aaPredicted RBP11.65□□□□□ -0.54
CASC4-209ENST00000559222 C7orf33Q8WU49 177 aa11.64□□□□□ -0.55
CASC4-209ENST00000559222 TMEM223A0PJW6 202 aa11.63□□□□□ -0.55
CASC4-209ENST00000559222 PRR3P79522 188 aaKnown RBP11.63□□□□□ -0.55
CASC4-209ENST00000559222 KRTAP11-1Q8IUC1 163 aa11.63□□□□□ -0.55
CASC4-209ENST00000559222 PMCHL2Q9BQD1 86 aa11.63□□□□□ -0.55
CASC4-209ENST00000559222 XAGE1AQ9HD64 81 aa11.63□□□□□ -0.55
CASC4-209ENST00000559222 FAT3Q8TDW7 4589 aa11.61□□□□□ -0.55
CASC4-209ENST00000559222 SERTAD4-AS1Q5TG53 156 aa11.61□□□□□ -0.55
CASC4-209ENST00000559222 DMBT1Q9UGM3 2413 aaPredicted RBP11.6□□□□□ -0.55
CASC4-209ENST00000559222 LRP1Q07954 4544 aaKnown RBP11.6□□□□□ -0.55
CASC4-209ENST00000559222 S100A1P23297 94 aa11.6□□□□□ -0.55
CASC4-209ENST00000559222 HSPB8Q9UJY1 196 aa11.6□□□□□ -0.55
CASC4-209ENST00000559222 ZNF625Q96I27 306 aaPredicted RBP11.59□□□□□ -0.55
CASC4-209ENST00000559222 M0QXV9 152 aa11.57□□□□□ -0.56
CASC4-209ENST00000559222 PFN2P35080 140 aa11.56□□□□□ -0.56
CASC4-209ENST00000559222 TSPEAR-AS2P59090 65 aa11.55□□□□□ -0.56
CASC4-209ENST00000559222 COA6Q5JTJ3 125 aaKnown RBP11.55□□□□□ -0.56
CASC4-209ENST00000559222 PSORS1C2Q9UIG4 136 aa11.55□□□□□ -0.56
CASC4-209ENST00000559222 ERG28Q9UKR5 140 aa11.54□□□□□ -0.56
CASC4-209ENST00000559222 MAP1LC3CQ9BXW4 147 aa11.53□□□□□ -0.56
CASC4-209ENST00000559222 DPM2O94777 84 aa11.52□□□□□ -0.57
CASC4-209ENST00000559222 SYS1-DBNDD2H3BUS1 97 aa11.51□□□□□ -0.57
CASC4-209ENST00000559222 IGKCP01834 107 aa11.51□□□□□ -0.57
CASC4-209ENST00000559222 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
CASC4-209ENST00000559222 PLNP26678 52 aa11.5□□□□□ -0.57
CASC4-209ENST00000559222 Q8NDZ9 215 aa11.5□□□□□ -0.57
CASC4-209ENST00000559222 A0A0U1RRA0 63 aa11.49□□□□□ -0.57
CASC4-209ENST00000559222 KRTAP29-1A8MX34 341 aaPredicted RBP11.49□□□□□ -0.57
CASC4-209ENST00000559222 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
CASC4-209ENST00000559222 C3orf79P0CE67 100 aa11.48□□□□□ -0.57
CASC4-209ENST00000559222 C1orf137Q5JT78 98 aa11.48□□□□□ -0.57
CASC4-209ENST00000559222 LEPROTO15243 131 aa11.47□□□□□ -0.57
CASC4-209ENST00000559222 UBE2BP63146 152 aa11.47□□□□□ -0.57
CASC4-209ENST00000559222 SRSF9Q13242 221 aaKnown RBP eCLIP11.47□□□□□ -0.57
CASC4-209ENST00000559222 NDUFA12Q9UI09 145 aa11.47□□□□□ -0.57
CASC4-209ENST00000559222 LINC01545Q5VT33 79 aa11.46□□□□□ -0.57
CASC4-209ENST00000559222 SMIM13P0DJ93 91 aa11.45□□□□□ -0.58
CASC4-209ENST00000559222 PLA2G2DQ9UNK4 145 aa11.45□□□□□ -0.58
CASC4-209ENST00000559222 GAGE10A6NGK3 116 aa11.44□□□□□ -0.58
CASC4-209ENST00000559222 LINC00158P58513 81 aa11.44□□□□□ -0.58
CASC4-209ENST00000559222 KRTDAPP60985 99 aa11.44□□□□□ -0.58
CASC4-209ENST00000559222 COX17Q14061 63 aa11.44□□□□□ -0.58
CASC4-209ENST00000559222 SFTA2Q6UW10 78 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms