RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 CIRBPQ14011 172 aaKnown RBP10.86□□□□□ -0.67
CDC42BPB-204ENST00000559043 SCGB1C2P0DMR2 95 aa10.85□□□□□ -0.67
CDC42BPB-204ENST00000559043 ICOSQ9Y6W8 199 aa10.85□□□□□ -0.67
CDC42BPB-204ENST00000559043 IGLV4-60A0A075B6I1 120 aa10.85□□□□□ -0.67
CDC42BPB-204ENST00000559043 MRPL23Q16540 153 aaKnown RBP10.85□□□□□ -0.67
CDC42BPB-204ENST00000559043 KLK5Q9Y337 293 aaPredicted RBP10.85□□□□□ -0.67
CDC42BPB-204ENST00000559043 LYSTQ99698 3801 aa10.84□□□□□ -0.67
CDC42BPB-204ENST00000559043 TRBV30A0A0K0K1B3 111 aa10.84□□□□□ -0.67
CDC42BPB-204ENST00000559043 ATP6V0E2Q8NHE4 81 aa10.84□□□□□ -0.67
CDC42BPB-204ENST00000559043 CHCHD5Q9BSY4 110 aa10.84□□□□□ -0.67
CDC42BPB-204ENST00000559043 H7C2G1 150 aa10.83□□□□□ -0.68
CDC42BPB-204ENST00000559043 NPC2P61916 151 aa10.83□□□□□ -0.68
CDC42BPB-204ENST00000559043 HERV-K104P63124 156 aa10.83□□□□□ -0.68
CDC42BPB-204ENST00000559043 ESRGQ1W209 222 aa10.83□□□□□ -0.68
CDC42BPB-204ENST00000559043 C15orf53Q8NAA6 179 aa10.83□□□□□ -0.68
CDC42BPB-204ENST00000559043 C3orf84H3BNL1 204 aa10.82□□□□□ -0.68
CDC42BPB-204ENST00000559043 J3QR89 54 aa10.82□□□□□ -0.68
CDC42BPB-204ENST00000559043 LYPD5Q6UWN5 251 aa10.82□□□□□ -0.68
CDC42BPB-204ENST00000559043 DAND5Q8N907 189 aa10.82□□□□□ -0.68
CDC42BPB-204ENST00000559043 Q1RN00 199 aa10.81□□□□□ -0.68
CDC42BPB-204ENST00000559043 LINC00308Q8TCZ7 52 aa10.81□□□□□ -0.68
CDC42BPB-204ENST00000559043 PCP4P48539 62 aa10.81□□□□□ -0.68
CDC42BPB-204ENST00000559043 PPDPFQ9H3Y8 114 aa10.81□□□□□ -0.68
CDC42BPB-204ENST00000559043 IGHV3OR16-9A0A0B4J2B5 98 aa10.8□□□□□ -0.68
CDC42BPB-204ENST00000559043 TRIAP1O43715 76 aa10.8□□□□□ -0.68
CDC42BPB-204ENST00000559043 COPS9Q8WXC6 57 aa10.79□□□□□ -0.68
CDC42BPB-204ENST00000559043 A0A1B0GUV1 79 aa10.79□□□□□ -0.68
CDC42BPB-204ENST00000559043 M0QXV9 152 aa10.79□□□□□ -0.68
CDC42BPB-204ENST00000559043 FOXI1Q12951 378 aa10.78□□□□□ -0.68
CDC42BPB-204ENST00000559043 COX7B2Q8TF08 81 aa10.78□□□□□ -0.68
CDC42BPB-204ENST00000559043 LINC00588Q9Y4M8 146 aa10.78□□□□□ -0.68
CDC42BPB-204ENST00000559043 A0A087WZ39 114 aa10.77□□□□□ -0.68
CDC42BPB-204ENST00000559043 ATXN8Q156A1 80 aa10.77□□□□□ -0.68
CDC42BPB-204ENST00000559043 MEIG1Q5JSS6 88 aa10.77□□□□□ -0.68
CDC42BPB-204ENST00000559043 SOSTDC1Q6X4U4 206 aa10.77□□□□□ -0.68
CDC42BPB-204ENST00000559043 IGKV3OR2-268A0A0C4DH90 116 aa10.77□□□□□ -0.69
CDC42BPB-204ENST00000559043 LINC00959A0A1B0GUT2 108 aa10.77□□□□□ -0.69
CDC42BPB-204ENST00000559043 TEN1Q86WV5 123 aa10.77□□□□□ -0.69
CDC42BPB-204ENST00000559043 LINC01600Q96MT4 127 aa10.76□□□□□ -0.69
CDC42BPB-204ENST00000559043 RPL13AP40429 203 aaKnown RBP10.76□□□□□ -0.69
CDC42BPB-204ENST00000559043 A0A0U1RRA0 63 aa10.75□□□□□ -0.69
CDC42BPB-204ENST00000559043 C9JAW5 83 aa10.75□□□□□ -0.69
CDC42BPB-204ENST00000559043 SLC25A20O43772 301 aa10.75□□□□□ -0.69
CDC42BPB-204ENST00000559043 COX6CP09669 75 aa10.74□□□□□ -0.69
CDC42BPB-204ENST00000559043 LINC01620Q4KN68 170 aa10.74□□□□□ -0.69
CDC42BPB-204ENST00000559043 PPDPFLQ8WWR9 84 aa10.74□□□□□ -0.69
CDC42BPB-204ENST00000559043 TMEM262E9PQX1 116 aa10.73□□□□□ -0.69
CDC42BPB-204ENST00000559043 LELP1Q5T871 98 aa10.73□□□□□ -0.69
CDC42BPB-204ENST00000559043 CARD19Q96LW7 228 aa10.73□□□□□ -0.69
CDC42BPB-204ENST00000559043 DNAH1Q9P2D7 4330 aa10.73□□□□□ -0.69
CDC42BPB-204ENST00000559043 VPS13DQ5THJ4 4388 aa10.73□□□□□ -0.69
CDC42BPB-204ENST00000559043 CCL18P55774 89 aa10.72□□□□□ -0.69
CDC42BPB-204ENST00000559043 WFDC10BQ8IUB3 73 aa10.72□□□□□ -0.69
CDC42BPB-204ENST00000559043 Q8N3U1 123 aa10.72□□□□□ -0.69
CDC42BPB-204ENST00000559043 ANKRD29Q8N6D5 301 aa10.72□□□□□ -0.69
CDC42BPB-204ENST00000559043 GAGE12HA6NDE8 117 aa10.72□□□□□ -0.69
CDC42BPB-204ENST00000559043 TOMM7Q9P0U1 55 aa10.72□□□□□ -0.69
CDC42BPB-204ENST00000559043 SS18Q15532 418 aa10.71□□□□□ -0.69
CDC42BPB-204ENST00000559043 C5orf38Q86SI9 138 aa10.71□□□□□ -0.69
CDC42BPB-204ENST00000559043 TRBV10-2A0A0K0K1G8 114 aa10.7□□□□□ -0.7
CDC42BPB-204ENST00000559043 LINC01561Q8N1V8 128 aa10.7□□□□□ -0.7
CDC42BPB-204ENST00000559043 LST1O00453 97 aa10.7□□□□□ -0.7
CDC42BPB-204ENST00000559043 IBA57-AS1B1ANH7 110 aa10.69□□□□□ -0.7
CDC42BPB-204ENST00000559043 MIR7-3HGQ8N6C7 128 aa10.68□□□□□ -0.7
CDC42BPB-204ENST00000559043 UPK3BQ9BT76 320 aa10.68□□□□□ -0.7
CDC42BPB-204ENST00000559043 XCL1P47992 114 aa10.68□□□□□ -0.7
CDC42BPB-204ENST00000559043 C21orf62-AS1Q17RA5 79 aa10.68□□□□□ -0.7
CDC42BPB-204ENST00000559043 UBE2DNLQ8IWF7 75 aa10.67□□□□□ -0.7
CDC42BPB-204ENST00000559043 LINC00476Q8WZB0 136 aa10.67□□□□□ -0.7
CDC42BPB-204ENST00000559043 CLEC2BQ92478 149 aa10.67□□□□□ -0.7
CDC42BPB-204ENST00000559043 KMT2AQ03164 3969 aa10.67□□□□□ -0.7
CDC42BPB-204ENST00000559043 SIGMAR1Q99720 223 aa10.66□□□□□ -0.7
CDC42BPB-204ENST00000559043 LY6G6CO95867 125 aa10.66□□□□□ -0.7
CDC42BPB-204ENST00000559043 Q8IZM0 81 aa10.66□□□□□ -0.7
CDC42BPB-204ENST00000559043 H3BT86 120 aa10.65□□□□□ -0.7
CDC42BPB-204ENST00000559043 COX7A2LO14548 114 aa10.65□□□□□ -0.7
CDC42BPB-204ENST00000559043 LINC00158P58513 81 aa10.65□□□□□ -0.7
CDC42BPB-204ENST00000559043 CLPSL2Q6UWE3 100 aa10.65□□□□□ -0.7
CDC42BPB-204ENST00000559043 LINC00269Q8N2A0 174 aa10.65□□□□□ -0.7
CDC42BPB-204ENST00000559043 ALMS1Q8TCU4 4167 aa10.65□□□□□ -0.7
CDC42BPB-204ENST00000559043 C6orf226Q5I0X4 101 aa10.65□□□□□ -0.71
CDC42BPB-204ENST00000559043 CD164L2Q6UWJ8 174 aa10.65□□□□□ -0.71
CDC42BPB-204ENST00000559043 TRAV13-2A0A0B4J235 113 aa10.64□□□□□ -0.71
CDC42BPB-204ENST00000559043 CDIP1Q9H305 208 aa10.64□□□□□ -0.71
CDC42BPB-204ENST00000559043 SND1-IT1Q9HBX3 110 aa10.64□□□□□ -0.71
CDC42BPB-204ENST00000559043 IGKV2-28A0A075B6P5 120 aa10.63□□□□□ -0.71
CDC42BPB-204ENST00000559043 IGKV2D-28P01615 120 aa10.63□□□□□ -0.71
CDC42BPB-204ENST00000559043 DNAH10OSP0CZ25 163 aa10.63□□□□□ -0.71
CDC42BPB-204ENST00000559043 NTN5Q8WTR8 489 aaPredicted RBP10.63□□□□□ -0.71
CDC42BPB-204ENST00000559043 KRTAP1-5Q9BYS1 174 aa10.63□□□□□ -0.71
CDC42BPB-204ENST00000559043 C2orf82Q6UX34 121 aa10.63□□□□□ -0.71
CDC42BPB-204ENST00000559043 REG3AQ06141 175 aa10.62□□□□□ -0.71
CDC42BPB-204ENST00000559043 HYDINQ4G0P3 5121 aa10.62□□□□□ -0.71
CDC42BPB-204ENST00000559043 ANGP03950 147 aaKnown RBP10.61□□□□□ -0.71
CDC42BPB-204ENST00000559043 LINC01556Q5JQF7 62 aa10.61□□□□□ -0.71
CDC42BPB-204ENST00000559043 LINC00337Q8N6G1 96 aa10.61□□□□□ -0.71
CDC42BPB-204ENST00000559043 CHCHD10Q8WYQ3 142 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPB-204ENST00000559043 CRPP02741 224 aa10.61□□□□□ -0.71
CDC42BPB-204ENST00000559043 PFN2P35080 140 aa10.61□□□□□ -0.71
CDC42BPB-204ENST00000559043 RPL28P46779 137 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9449.7 ms