RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 TRAV23DV6A0A075B6W5 121 aa3.63□□□□□ -1.83
HMG20A-204ENST00000558288 TRAV25A0A0B4J276 109 aa3.63□□□□□ -1.83
HMG20A-204ENST00000558288 UBE2L6O14933 153 aa3.63□□□□□ -1.83
HMG20A-204ENST00000558288 PAX4O43316 350 aa3.63□□□□□ -1.83
HMG20A-204ENST00000558288 IGLV1-40P01703 118 aa3.63□□□□□ -1.83
HMG20A-204ENST00000558288 PFN2P35080 140 aa3.63□□□□□ -1.83
HMG20A-204ENST00000558288 RPL36AP83881 106 aaKnown RBP3.63□□□□□ -1.83
HMG20A-204ENST00000558288 LINC00337Q8N6G1 96 aa3.63□□□□□ -1.83
HMG20A-204ENST00000558288 RPL36ALQ969Q0 106 aaKnown RBP3.63□□□□□ -1.83
HMG20A-204ENST00000558288 A6NDX4 124 aa3.62□□□□□ -1.83
HMG20A-204ENST00000558288 WIPF1O43516 503 aa3.62□□□□□ -1.83
HMG20A-204ENST00000558288 PRB2P02812 416 aaPredicted RBP3.62□□□□□ -1.83
HMG20A-204ENST00000558288 RPL28P46779 137 aaKnown RBP3.62□□□□□ -1.83
HMG20A-204ENST00000558288 KHDC1LQ5JSQ8 128 aa3.62□□□□□ -1.83
HMG20A-204ENST00000558288 F5H768 121 aa3.62□□□□□ -1.83
HMG20A-204ENST00000558288 GHRHP01286 108 aa3.62□□□□□ -1.83
HMG20A-204ENST00000558288 HILS1P60008 231 aa3.62□□□□□ -1.83
HMG20A-204ENST00000558288 LINC01561Q8N1V8 128 aa3.62□□□□□ -1.83
HMG20A-204ENST00000558288 C11orf68Q9H3H3 251 aaKnown RBP3.62□□□□□ -1.83
HMG20A-204ENST00000558288 TRGV1A0A0A0MS02 117 aa3.62□□□□□ -1.83
HMG20A-204ENST00000558288 OXTP01178 125 aa3.62□□□□□ -1.83
HMG20A-204ENST00000558288 PF4P02776 101 aa3.62□□□□□ -1.83
HMG20A-204ENST00000558288 AVPP01185 164 aa3.61□□□□□ -1.83
HMG20A-204ENST00000558288 TMEM243Q9BU79 118 aa3.61□□□□□ -1.83
HMG20A-204ENST00000558288 RBMY1BA6NDE4 496 aaKnown RBP3.61□□□□□ -1.83
HMG20A-204ENST00000558288 RBMY1EA6NEQ0 496 aaKnown RBP3.61□□□□□ -1.83
HMG20A-204ENST00000558288 H0YGX0 51 aa3.61□□□□□ -1.83
HMG20A-204ENST00000558288 RBMY1DP0C7P1 496 aaKnown RBP3.61□□□□□ -1.83
HMG20A-204ENST00000558288 C20orf197Q8N268 126 aa3.61□□□□□ -1.83
HMG20A-204ENST00000558288 IGKV2-28A0A075B6P5 120 aa3.61□□□□□ -1.83
HMG20A-204ENST00000558288 IGKV2D-28P01615 120 aa3.61□□□□□ -1.83
HMG20A-204ENST00000558288 FHL2Q14192 279 aa3.61□□□□□ -1.83
HMG20A-204ENST00000558288 COX7B2Q8TF08 81 aa3.61□□□□□ -1.83
HMG20A-204ENST00000558288 UPK3BQ9BT76 320 aa3.61□□□□□ -1.83
HMG20A-204ENST00000558288 ORMDL1Q9P0S3 153 aa3.61□□□□□ -1.83
HMG20A-204ENST00000558288 PSMB8P28062 276 aa3.6□□□□□ -1.83
HMG20A-204ENST00000558288 DEFB136Q30KP8 78 aa3.6□□□□□ -1.83
HMG20A-204ENST00000558288 ENHOQ6UWT2 76 aa3.6□□□□□ -1.83
HMG20A-204ENST00000558288 UBE2E2Q96LR5 201 aa3.6□□□□□ -1.83
HMG20A-204ENST00000558288 XCL2Q9UBD3 114 aa3.6□□□□□ -1.83
HMG20A-204ENST00000558288 DNAJC9-AS1A6NH13 148 aa3.6□□□□□ -1.83
HMG20A-204ENST00000558288 INSP01308 110 aa3.59□□□□□ -1.83
HMG20A-204ENST00000558288 IGHV4-59P01825 116 aa3.59□□□□□ -1.83
HMG20A-204ENST00000558288 CCL18P55774 89 aa3.59□□□□□ -1.83
HMG20A-204ENST00000558288 S100A7L2Q5SY68 101 aa3.59□□□□□ -1.83
HMG20A-204ENST00000558288 FAM19A1Q7Z5A9 133 aa3.59□□□□□ -1.83
HMG20A-204ENST00000558288 CDC42SE2Q9NRR3 84 aa3.59□□□□□ -1.83
HMG20A-204ENST00000558288 SLURP1P55000 103 aa3.59□□□□□ -1.83
HMG20A-204ENST00000558288 NBEAL2Q6ZNJ1 2754 aa3.59□□□□□ -1.83
HMG20A-204ENST00000558288 A0A096LNT2 108 aa3.59□□□□□ -1.84
HMG20A-204ENST00000558288 FAM236DA0A1B0GTK5 79 aa3.59□□□□□ -1.84
HMG20A-204ENST00000558288 CCKP06307 115 aa3.59□□□□□ -1.84
HMG20A-204ENST00000558288 FAM236CP0DP71 79 aa3.59□□□□□ -1.84
HMG20A-204ENST00000558288 Q5XG85 94 aa3.59□□□□□ -1.84
HMG20A-204ENST00000558288 NTM-AS1Q6ZSK4 140 aa3.59□□□□□ -1.84
HMG20A-204ENST00000558288 DYNLRB2Q8TF09 96 aa3.59□□□□□ -1.84
HMG20A-204ENST00000558288 A0A1W2PRX2 142 aa3.58□□□□□ -1.84
HMG20A-204ENST00000558288 K7EQD1 137 aa3.58□□□□□ -1.84
HMG20A-204ENST00000558288 C11orf72Q8NBR9 251 aa3.58□□□□□ -1.84
HMG20A-204ENST00000558288 ESM1Q9NQ30 184 aa3.58□□□□□ -1.84
HMG20A-204ENST00000558288 TMEM89A2RUT3 159 aa3.58□□□□□ -1.84
HMG20A-204ENST00000558288 NDUFC2O95298 119 aa3.58□□□□□ -1.84
HMG20A-204ENST00000558288 DEFB112Q30KQ8 113 aa3.58□□□□□ -1.84
HMG20A-204ENST00000558288 UBL5Q9BZL1 73 aa3.58□□□□□ -1.84
HMG20A-204ENST00000558288 CUBNO60494 3623 aa3.58□□□□□ -1.84
HMG20A-204ENST00000558288 C6orf226Q5I0X4 101 aa3.57□□□□□ -1.84
HMG20A-204ENST00000558288 Q6ZTI0 123 aa3.57□□□□□ -1.84
HMG20A-204ENST00000558288 J3QLI3 93 aa3.57□□□□□ -1.84
HMG20A-204ENST00000558288 OBSCN-AS1Q96MR7 158 aa3.57□□□□□ -1.84
HMG20A-204ENST00000558288 C1orf43Q9BWL3 253 aa3.57□□□□□ -1.84
HMG20A-204ENST00000558288 MAP6D1Q9H9H5 199 aa3.57□□□□□ -1.84
HMG20A-204ENST00000558288 TRGV2A0A075B6R0 118 aa3.57□□□□□ -1.84
HMG20A-204ENST00000558288 JMJD7-PLA2G4BH0Y9G9 81 aa3.57□□□□□ -1.84
HMG20A-204ENST00000558288 XCL1P47992 114 aa3.57□□□□□ -1.84
HMG20A-204ENST00000558288 HAMPP81172 84 aa3.57□□□□□ -1.84
HMG20A-204ENST00000558288 C18orf65Q6ZTR6 163 aa3.57□□□□□ -1.84
HMG20A-204ENST00000558288 ATP5EP2Q5VTU8 51 aa3.56□□□□□ -1.84
HMG20A-204ENST00000558288 STHQ8IWL8 128 aa3.56□□□□□ -1.84
HMG20A-204ENST00000558288 TMEM86BQ8N661 226 aa3.56□□□□□ -1.84
HMG20A-204ENST00000558288 SNURFQ9Y675 71 aa3.56□□□□□ -1.84
HMG20A-204ENST00000558288 LOC100131303A0A0U1RQF7 123 aa3.56□□□□□ -1.84
HMG20A-204ENST00000558288 IBA57-AS1B1ANH7 110 aa3.56□□□□□ -1.84
HMG20A-204ENST00000558288 PRR3P79522 188 aaKnown RBP3.56□□□□□ -1.84
HMG20A-204ENST00000558288 FAM19A3Q7Z5A8 133 aa3.56□□□□□ -1.84
HMG20A-204ENST00000558288 MRAPQ8TCY5 172 aa3.56□□□□□ -1.84
HMG20A-204ENST00000558288 NOP10Q9NPE3 64 aaKnown RBP3.56□□□□□ -1.84
HMG20A-204ENST00000558288 TRBV10-1A0A0K0K1A3 114 aa3.56□□□□□ -1.84
HMG20A-204ENST00000558288 NDUFC2-KCTD14E9PQ53 114 aa3.56□□□□□ -1.84
HMG20A-204ENST00000558288 IGLV4-60A0A075B6I1 120 aa3.55□□□□□ -1.84
HMG20A-204ENST00000558288 TRBV6-4A0A1B0GX49 114 aa3.55□□□□□ -1.84
HMG20A-204ENST00000558288 TMEM256-PLSCR3K7ERE1 68 aa3.55□□□□□ -1.84
HMG20A-204ENST00000558288 LAMTOR3Q9UHA4 124 aa3.55□□□□□ -1.84
HMG20A-204ENST00000558288 TRGV4A0A0C4DH28 118 aa3.55□□□□□ -1.84
HMG20A-204ENST00000558288 SS18Q15532 418 aa3.55□□□□□ -1.84
HMG20A-204ENST00000558288 CLPSL2Q6UWE3 100 aa3.55□□□□□ -1.84
HMG20A-204ENST00000558288 Q8N814 137 aa3.55□□□□□ -1.84
HMG20A-204ENST00000558288 PKIGQ9Y2B9 76 aa3.55□□□□□ -1.84
HMG20A-204ENST00000558288 SERP1Q9Y6X1 66 aa3.55□□□□□ -1.84
HMG20A-204ENST00000558288 MEGF8Q7Z7M0 2845 aa3.54□□□□□ -1.84
HMG20A-204ENST00000558288 RBM3P98179 157 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms