RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 GEMIN7Q9H840 131 aaKnown RBP8.58□□□□□ -1.04
SNX6-210ENST00000557341 ADCYAP1P18509 176 aa8.57□□□□□ -1.04
SNX6-210ENST00000557341 CDKN2A-AS1Q9UH64 79 aa8.57□□□□□ -1.04
SNX6-210ENST00000557341 TRAV9-1A0A075B6T8 112 aa8.56□□□□□ -1.04
SNX6-210ENST00000557341 F8VRH5 84 aa8.56□□□□□ -1.04
SNX6-210ENST00000557341 CXCL5P42830 114 aa8.56□□□□□ -1.04
SNX6-210ENST00000557341 KIAA1644Q3SXP7 199 aa8.56□□□□□ -1.04
SNX6-210ENST00000557341 UQCC3Q6UW78 93 aa8.56□□□□□ -1.04
SNX6-210ENST00000557341 LINC00469Q8N7U9 141 aa8.56□□□□□ -1.04
SNX6-210ENST00000557341 IGLV1-50A0A075B6I6 118 aa8.55□□□□□ -1.04
SNX6-210ENST00000557341 ERASQ7Z444 233 aa8.55□□□□□ -1.04
SNX6-210ENST00000557341 LINC01549A6NIU2 74 aa8.54□□□□□ -1.04
SNX6-210ENST00000557341 KRTAP1-4P0C5Y4 121 aa8.54□□□□□ -1.04
SNX6-210ENST00000557341 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
SNX6-210ENST00000557341 XAGE1AQ9HD64 81 aa8.54□□□□□ -1.04
SNX6-210ENST00000557341 TMEM218A2RU14 115 aa8.53□□□□□ -1.04
SNX6-210ENST00000557341 SMIM1B2RUZ4 78 aa8.53□□□□□ -1.04
SNX6-210ENST00000557341 NUPR1O60356 82 aa8.53□□□□□ -1.04
SNX6-210ENST00000557341 S100PP25815 95 aa8.53□□□□□ -1.04
SNX6-210ENST00000557341 C22orf24Q9Y442 160 aa8.53□□□□□ -1.04
SNX6-210ENST00000557341 RPL13AP40429 203 aaKnown RBP8.52□□□□□ -1.05
SNX6-210ENST00000557341 LBHQ53QV2 105 aaPredicted RBP8.52□□□□□ -1.05
SNX6-210ENST00000557341 GNB1LQ9BYB4 327 aa8.52□□□□□ -1.05
SNX6-210ENST00000557341 LPAP08519 4548 aa8.52□□□□□ -1.05
SNX6-210ENST00000557341 TINCRA0A1B0GVN0 87 aa8.51□□□□□ -1.05
SNX6-210ENST00000557341 PDZD11Q5EBL8 140 aa8.51□□□□□ -1.05
SNX6-210ENST00000557341 TP73-AS1Q9UF72 201 aa8.51□□□□□ -1.05
SNX6-210ENST00000557341 IGLV5-45A0A087WSX0 123 aa8.5□□□□□ -1.05
SNX6-210ENST00000557341 LINC01546A6NGU7 62 aa8.5□□□□□ -1.05
SNX6-210ENST00000557341 ZNF861PO60384 105 aa8.5□□□□□ -1.05
SNX6-210ENST00000557341 MRPL55Q7Z7F7 128 aaKnown RBP8.5□□□□□ -1.05
SNX6-210ENST00000557341 COX7B2Q8TF08 81 aa8.5□□□□□ -1.05
SNX6-210ENST00000557341 SEC11CQ9BY50 192 aa8.5□□□□□ -1.05
SNX6-210ENST00000557341 COX19Q49B96 90 aa8.49□□□□□ -1.05
SNX6-210ENST00000557341 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
SNX6-210ENST00000557341 FA2HQ7L5A8 372 aa8.48□□□□□ -1.05
SNX6-210ENST00000557341 CARHSP1Q9Y2V2 147 aaKnown RBP8.48□□□□□ -1.05
SNX6-210ENST00000557341 SPINK8P0C7L1 97 aa8.47□□□□□ -1.05
SNX6-210ENST00000557341 PMVKQ15126 192 aa8.47□□□□□ -1.05
SNX6-210ENST00000557341 MRPL18Q9H0U6 180 aaKnown RBP8.47□□□□□ -1.05
SNX6-210ENST00000557341 CST9LQ9H4G1 147 aa8.47□□□□□ -1.05
SNX6-210ENST00000557341 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.06
SNX6-210ENST00000557341 IFITM2Q01629 132 aa8.46□□□□□ -1.06
SNX6-210ENST00000557341 H3BRM9 83 aa8.45□□□□□ -1.06
SNX6-210ENST00000557341 BCE1O60756 84 aa8.45□□□□□ -1.06
SNX6-210ENST00000557341 FABP9Q0Z7S8 132 aa8.45□□□□□ -1.06
SNX6-210ENST00000557341 ATP5LO75964 103 aa8.44□□□□□ -1.06
SNX6-210ENST00000557341 RHEBQ15382 184 aa8.44□□□□□ -1.06
SNX6-210ENST00000557341 COMMD7Q86VX2 200 aa8.44□□□□□ -1.06
SNX6-210ENST00000557341 LINC00167Q96N53 147 aa8.44□□□□□ -1.06
SNX6-210ENST00000557341 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
SNX6-210ENST00000557341 RAB5BP61020 215 aa8.43□□□□□ -1.06
SNX6-210ENST00000557341 NKAPP1Q8N9T2 125 aa8.43□□□□□ -1.06
SNX6-210ENST00000557341 IGLV5-37A0A075B6J1 123 aa8.42□□□□□ -1.06
SNX6-210ENST00000557341 RPS10P5Q9NQ39 176 aa8.42□□□□□ -1.06
SNX6-210ENST00000557341 GAGE10A6NGK3 116 aa8.41□□□□□ -1.06
SNX6-210ENST00000557341 IGLC3P0DOY3 106 aa8.41□□□□□ -1.06
SNX6-210ENST00000557341 PRR4Q16378 134 aa8.41□□□□□ -1.06
SNX6-210ENST00000557341 C10orf91Q5T1B1 145 aa8.41□□□□□ -1.06
SNX6-210ENST00000557341 A0A096LNJ9 63 aa8.4□□□□□ -1.06
SNX6-210ENST00000557341 NDUFA6P56556 154 aa8.4□□□□□ -1.06
SNX6-210ENST00000557341 A0A087X002 238 aa8.39□□□□□ -1.07
SNX6-210ENST00000557341 IGLV5-39A0A0G2JS06 123 aa8.39□□□□□ -1.07
SNX6-210ENST00000557341 HBDP02042 147 aa8.39□□□□□ -1.07
SNX6-210ENST00000557341 ZNF22P17026 224 aaPredicted RBP8.39□□□□□ -1.07
SNX6-210ENST00000557341 UBE2AP49459 152 aa8.39□□□□□ -1.07
SNX6-210ENST00000557341 C18orf32Q8TCD1 76 aa8.39□□□□□ -1.07
SNX6-210ENST00000557341 LINC00614P0C842 121 aa8.38□□□□□ -1.07
SNX6-210ENST00000557341 CRYGAP11844 174 aa8.38□□□□□ -1.07
SNX6-210ENST00000557341 PFN2P35080 140 aa8.38□□□□□ -1.07
SNX6-210ENST00000557341 TRAPPC1Q9Y5R8 145 aa8.38□□□□□ -1.07
SNX6-210ENST00000557341 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
SNX6-210ENST00000557341 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
SNX6-210ENST00000557341 KRTAP13-1Q8IUC0 172 aa8.37□□□□□ -1.07
SNX6-210ENST00000557341 TYMSOSQ8TAI1 123 aa8.37□□□□□ -1.07
SNX6-210ENST00000557341 URB1-AS1Q96HZ7 61 aa8.37□□□□□ -1.07
SNX6-210ENST00000557341 ERG28Q9UKR5 140 aa8.37□□□□□ -1.07
SNX6-210ENST00000557341 PMCHL1Q16048 86 aa8.36□□□□□ -1.07
SNX6-210ENST00000557341 SFTA2Q6UW10 78 aa8.36□□□□□ -1.07
SNX6-210ENST00000557341 SCO1O75880 301 aa8.35□□□□□ -1.07
SNX6-210ENST00000557341 TSPAN13O95857 204 aa8.35□□□□□ -1.07
SNX6-210ENST00000557341 COX17Q14061 63 aa8.35□□□□□ -1.07
SNX6-210ENST00000557341 SND1-IT1Q9HBX3 110 aa8.35□□□□□ -1.07
SNX6-210ENST00000557341 C11orf86A6NJI1 115 aa8.34□□□□□ -1.07
SNX6-210ENST00000557341 VPREB1P12018 145 aa8.34□□□□□ -1.07
SNX6-210ENST00000557341 TMEM170BQ5T4T1 132 aa8.34□□□□□ -1.07
SNX6-210ENST00000557341 RPL24P83731 157 aaKnown RBP8.33□□□□□ -1.08
SNX6-210ENST00000557341 BAGE3Q86Y29 109 aa8.33□□□□□ -1.08
SNX6-210ENST00000557341 ZNF625Q96I27 306 aaPredicted RBP8.33□□□□□ -1.08
SNX6-210ENST00000557341 PRLHP81277 87 aa8.32□□□□□ -1.08
SNX6-210ENST00000557341 FAM229BQ4G0N7 80 aa8.32□□□□□ -1.08
SNX6-210ENST00000557341 TMEM126AQ9H061 195 aa8.32□□□□□ -1.08
SNX6-210ENST00000557341 ANAPC11Q9NYG5 84 aa8.32□□□□□ -1.08
SNX6-210ENST00000557341 APOC3P02656 99 aa8.31□□□□□ -1.08
SNX6-210ENST00000557341 FAM19A1Q7Z5A9 133 aa8.31□□□□□ -1.08
SNX6-210ENST00000557341 TMEM238C9JI98 176 aa8.3□□□□□ -1.08
SNX6-210ENST00000557341 SNAPINO95295 136 aa8.3□□□□□ -1.08
SNX6-210ENST00000557341 NDUFA5Q16718 116 aa8.3□□□□□ -1.08
SNX6-210ENST00000557341 KRTAP13-2Q52LG2 175 aa8.3□□□□□ -1.08
SNX6-210ENST00000557341 MUC2Q02817 5179 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms