RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 LINC00167Q96N53 147 aa7.13□□□□□ -1.27
SNX6-209ENST00000557265 C2orf88Q9BSF0 95 aa7.13□□□□□ -1.27
SNX6-209ENST00000557265 ALKBH7Q9BT30 221 aaPredicted RBP7.13□□□□□ -1.27
SNX6-209ENST00000557265 FSIP2Q5CZC0 6907 aa7.13□□□□□ -1.27
SNX6-209ENST00000557265 S100A8P05109 93 aa7.12□□□□□ -1.27
SNX6-209ENST00000557265 LINC00173Q6ZV60 143 aa7.12□□□□□ -1.27
SNX6-209ENST00000557265 A0A1B0GXF2 115 aa7.11□□□□□ -1.27
SNX6-209ENST00000557265 GAGE10A6NGK3 116 aa7.11□□□□□ -1.27
SNX6-209ENST00000557265 TMEM136Q6ZRR5 245 aa7.11□□□□□ -1.27
SNX6-209ENST00000557265 ORMDL3Q8N138 153 aa7.11□□□□□ -1.27
SNX6-209ENST00000557265 PRELID3AQ96N28 172 aa7.11□□□□□ -1.27
SNX6-209ENST00000557265 VCX2Q9H322 139 aa7.11□□□□□ -1.27
SNX6-209ENST00000557265 LOC389332A0A1B0GUA5 103 aa7.1□□□□□ -1.27
SNX6-209ENST00000557265 F8VRH5 84 aa7.1□□□□□ -1.27
SNX6-209ENST00000557265 FAM229BQ4G0N7 80 aa7.1□□□□□ -1.27
SNX6-209ENST00000557265 C2orf66Q6UXQ4 117 aa7.1□□□□□ -1.27
SNX6-209ENST00000557265 KRTAP13-1Q8IUC0 172 aa7.1□□□□□ -1.27
SNX6-209ENST00000557265 AMELXQ99217 191 aa7.1□□□□□ -1.27
SNX6-209ENST00000557265 IGKV2D-26A0A0A0MRZ7 120 aa7.09□□□□□ -1.27
SNX6-209ENST00000557265 UBE2AP49459 152 aa7.09□□□□□ -1.27
SNX6-209ENST00000557265 NAT8Q9UHE5 227 aa7.09□□□□□ -1.27
SNX6-209ENST00000557265 CYSLTR1Q9Y271 337 aa7.09□□□□□ -1.27
SNX6-209ENST00000557265 C9JQL5 133 aa7.08□□□□□ -1.28
SNX6-209ENST00000557265 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
SNX6-209ENST00000557265 CDKN2A-AS1Q9UH64 79 aa7.08□□□□□ -1.28
SNX6-209ENST00000557265 PRSS47A8MTI9 375 aa7.07□□□□□ -1.28
SNX6-209ENST00000557265 HERVK_113P63121 156 aa7.07□□□□□ -1.28
SNX6-209ENST00000557265 FAM19A3Q7Z5A8 133 aa7.07□□□□□ -1.28
SNX6-209ENST00000557265 IGIPA6NJ69 53 aa7.06□□□□□ -1.28
SNX6-209ENST00000557265 MAP1LC3AQ9H492 121 aa7.06□□□□□ -1.28
SNX6-209ENST00000557265 NPSP0C0P6 89 aa7.05□□□□□ -1.28
SNX6-209ENST00000557265 CXCL5P42830 114 aa7.05□□□□□ -1.28
SNX6-209ENST00000557265 SEC11AP67812 179 aa7.05□□□□□ -1.28
SNX6-209ENST00000557265 CTAG1AP78358 180 aa7.05□□□□□ -1.28
SNX6-209ENST00000557265 PNRC1Q12796 327 aaPredicted RBP7.05□□□□□ -1.28
SNX6-209ENST00000557265 Q8N8P6 123 aa7.05□□□□□ -1.28
SNX6-209ENST00000557265 NKAPP1Q8N9T2 125 aa7.05□□□□□ -1.28
SNX6-209ENST00000557265 GEMIN7Q9H840 131 aaKnown RBP7.05□□□□□ -1.28
SNX6-209ENST00000557265 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
SNX6-209ENST00000557265 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
SNX6-209ENST00000557265 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
SNX6-209ENST00000557265 RAB5BP61020 215 aa7.04□□□□□ -1.28
SNX6-209ENST00000557265 LAMTOR2Q9Y2Q5 125 aa7.04□□□□□ -1.28
SNX6-209ENST00000557265 SCO1O75880 301 aa7.03□□□□□ -1.28
SNX6-209ENST00000557265 LINC01547P58512 204 aaPredicted RBP7.03□□□□□ -1.28
SNX6-209ENST00000557265 PRLHP81277 87 aa7.03□□□□□ -1.28
SNX6-209ENST00000557265 SRSF3P84103 164 aaKnown RBP7.03□□□□□ -1.28
SNX6-209ENST00000557265 ORMDL2Q53FV1 153 aa7.03□□□□□ -1.28
SNX6-209ENST00000557265 ATP5L2Q7Z4Y8 100 aa7.03□□□□□ -1.28
SNX6-209ENST00000557265 SMIM1B2RUZ4 78 aa7.02□□□□□ -1.29
SNX6-209ENST00000557265 PAPPA-AS1Q5QFB9 102 aa7.02□□□□□ -1.29
SNX6-209ENST00000557265 C3orf22Q8N5N4 141 aa7.02□□□□□ -1.29
SNX6-209ENST00000557265 COX7B2Q8TF08 81 aa7.02□□□□□ -1.29
SNX6-209ENST00000557265 CRCT1Q9UGL9 99 aa7.02□□□□□ -1.29
SNX6-209ENST00000557265 PEA15Q15121 130 aa7.01□□□□□ -1.29
SNX6-209ENST00000557265 PDZD11Q5EBL8 140 aa7.01□□□□□ -1.29
SNX6-209ENST00000557265 FAM19A1Q7Z5A9 133 aa7.01□□□□□ -1.29
SNX6-209ENST00000557265 LINC00337Q8N6G1 96 aa7.01□□□□□ -1.29
SNX6-209ENST00000557265 TMEM238C9JI98 176 aa7□□□□□ -1.29
SNX6-209ENST00000557265 PLEKHB2Q96CS7 222 aa7□□□□□ -1.29
SNX6-209ENST00000557265 K7EMI3 77 aa6.99□□□□□ -1.29
SNX6-209ENST00000557265 ASB16-AS1Q495Z4 193 aa6.99□□□□□ -1.29
SNX6-209ENST00000557265 SPAG11AQ6PDA7 123 aa6.99□□□□□ -1.29
SNX6-209ENST00000557265 TIMM17AQ99595 171 aa6.99□□□□□ -1.29
SNX6-209ENST00000557265 TMEM126AQ9H061 195 aa6.99□□□□□ -1.29
SNX6-209ENST00000557265 KRTAP13-3Q3SY46 172 aa6.98□□□□□ -1.29
SNX6-209ENST00000557265 FP248Q71RG6 208 aaPredicted RBP6.98□□□□□ -1.29
SNX6-209ENST00000557265 KRTAP4-1Q9BYQ7 146 aa6.98□□□□□ -1.29
SNX6-209ENST00000557265 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
SNX6-209ENST00000557265 SPINK8P0C7L1 97 aa6.97□□□□□ -1.29
SNX6-209ENST00000557265 G0S2P27469 103 aa6.97□□□□□ -1.29
SNX6-209ENST00000557265 CBLN2Q8IUK8 224 aa6.97□□□□□ -1.29
SNX6-209ENST00000557265 TOMM6Q96B49 74 aa6.97□□□□□ -1.29
SNX6-209ENST00000557265 NXT2Q9NPJ8 142 aaKnown RBP6.97□□□□□ -1.29
SNX6-209ENST00000557265 IGLV5-45A0A087WSX0 123 aa6.96□□□□□ -1.3
SNX6-209ENST00000557265 M0R378 163 aa6.96□□□□□ -1.3
SNX6-209ENST00000557265 PFN2P35080 140 aa6.96□□□□□ -1.3
SNX6-209ENST00000557265 ERASQ7Z444 233 aa6.96□□□□□ -1.3
SNX6-209ENST00000557265 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.3
SNX6-209ENST00000557265 ATP5LO75964 103 aa6.95□□□□□ -1.3
SNX6-209ENST00000557265 VPREB1P12018 145 aa6.95□□□□□ -1.3
SNX6-209ENST00000557265 ADCYAP1P18509 176 aa6.95□□□□□ -1.3
SNX6-209ENST00000557265 C4orf48Q5BLP8 95 aa6.95□□□□□ -1.3
SNX6-209ENST00000557265 HIGD2AQ9BW72 106 aa6.95□□□□□ -1.3
SNX6-209ENST00000557265 GNB1LQ9BYB4 327 aa6.95□□□□□ -1.3
SNX6-209ENST00000557265 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
SNX6-209ENST00000557265 RPL24P83731 157 aaKnown RBP6.93□□□□□ -1.3
SNX6-209ENST00000557265 SPRR4Q96PI1 79 aa6.93□□□□□ -1.3
SNX6-209ENST00000557265 CST9LQ9H4G1 147 aa6.93□□□□□ -1.3
SNX6-209ENST00000557265 SND1-IT1Q9HBX3 110 aa6.93□□□□□ -1.3
SNX6-209ENST00000557265 RAB14P61106 215 aa6.92□□□□□ -1.3
SNX6-209ENST00000557265 DAND5Q8N907 189 aa6.92□□□□□ -1.3
SNX6-209ENST00000557265 Q8NBF4 154 aa6.92□□□□□ -1.3
SNX6-209ENST00000557265 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
SNX6-209ENST00000557265 Q8NDZ9 215 aa6.91□□□□□ -1.3
SNX6-209ENST00000557265 H3BRM9 83 aa6.9□□□□□ -1.3
SNX6-209ENST00000557265 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
SNX6-209ENST00000557265 MT-ND4LP03901 98 aa6.89□□□□□ -1.31
SNX6-209ENST00000557265 KIAA1644Q3SXP7 199 aa6.89□□□□□ -1.31
SNX6-209ENST00000557265 ANAPC16Q96DE5 110 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms