RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PRR4Q16378 134 aa5.17□□□□□ -1.58
VRK1-206ENST00000557222 GAGE2EQ4V326 116 aa5.17□□□□□ -1.58
VRK1-206ENST00000557222 GAGE2DQ9UEU5 116 aa5.17□□□□□ -1.58
VRK1-206ENST00000557222 NUPR1O60356 82 aa5.16□□□□□ -1.58
VRK1-206ENST00000557222 ZNF861PO60384 105 aa5.16□□□□□ -1.58
VRK1-206ENST00000557222 IFI27P40305 119 aaPredicted RBP5.16□□□□□ -1.58
VRK1-206ENST00000557222 PACRGQ96M98 296 aaPredicted RBP5.16□□□□□ -1.58
VRK1-206ENST00000557222 FAT4Q6V0I7 4981 aa5.15□□□□□ -1.58
VRK1-206ENST00000557222 D6R8Y8 96 aa5.15□□□□□ -1.59
VRK1-206ENST00000557222 RAB5AP20339 215 aa5.15□□□□□ -1.59
VRK1-206ENST00000557222 RPL23P62829 140 aaKnown RBP5.15□□□□□ -1.59
VRK1-206ENST00000557222 LBHQ53QV2 105 aaPredicted RBP5.15□□□□□ -1.59
VRK1-206ENST00000557222 LINC00242Q5T6M2 205 aa5.15□□□□□ -1.59
VRK1-206ENST00000557222 NAT8Q9UHE5 227 aa5.15□□□□□ -1.59
VRK1-206ENST00000557222 A0A1B0GXF2 115 aa5.14□□□□□ -1.59
VRK1-206ENST00000557222 PRSS47A8MTI9 375 aa5.14□□□□□ -1.59
VRK1-206ENST00000557222 C9orf129Q5T035 196 aaKnown RBP5.14□□□□□ -1.59
VRK1-206ENST00000557222 TMEM141Q96I45 108 aa5.14□□□□□ -1.59
VRK1-206ENST00000557222 IGLV4-3A0A075B6K6 122 aa5.13□□□□□ -1.59
VRK1-206ENST00000557222 NPYP01303 97 aa5.13□□□□□ -1.59
VRK1-206ENST00000557222 ADIRFQ15847 76 aa5.13□□□□□ -1.59
VRK1-206ENST00000557222 Q6ZN92 141 aa5.13□□□□□ -1.59
VRK1-206ENST00000557222 TEX43Q6ZNM6 134 aa5.13□□□□□ -1.59
VRK1-206ENST00000557222 AKAP14Q86UN6 197 aa5.13□□□□□ -1.59
VRK1-206ENST00000557222 ORMDL3Q8N138 153 aa5.13□□□□□ -1.59
VRK1-206ENST00000557222 TP73-AS1Q9UF72 201 aa5.13□□□□□ -1.59
VRK1-206ENST00000557222 LAMTOR2Q9Y2Q5 125 aa5.13□□□□□ -1.59
VRK1-206ENST00000557222 MUC17Q685J3 4493 aa5.12□□□□□ -1.59
VRK1-206ENST00000557222 PRSS2P07478 247 aa5.12□□□□□ -1.59
VRK1-206ENST00000557222 CTAG1AP78358 180 aa5.12□□□□□ -1.59
VRK1-206ENST00000557222 C2orf82Q6UX34 121 aa5.12□□□□□ -1.59
VRK1-206ENST00000557222 TMEM136Q6ZRR5 245 aa5.12□□□□□ -1.59
VRK1-206ENST00000557222 ATP5L2Q7Z4Y8 100 aa5.12□□□□□ -1.59
VRK1-206ENST00000557222 FAM19A3Q7Z5A8 133 aa5.12□□□□□ -1.59
VRK1-206ENST00000557222 Q8IZM0 81 aa5.12□□□□□ -1.59
VRK1-206ENST00000557222 C2orf88Q9BSF0 95 aa5.12□□□□□ -1.59
VRK1-206ENST00000557222 C22orf24Q9Y442 160 aa5.12□□□□□ -1.59
VRK1-206ENST00000557222 K7EMI3 77 aa5.11□□□□□ -1.59
VRK1-206ENST00000557222 CRYGAP11844 174 aa5.11□□□□□ -1.59
VRK1-206ENST00000557222 RPL28P46779 137 aaKnown RBP5.11□□□□□ -1.59
VRK1-206ENST00000557222 CKS1BP61024 79 aa5.11□□□□□ -1.59
VRK1-206ENST00000557222 SEC11AP67812 179 aa5.11□□□□□ -1.59
VRK1-206ENST00000557222 C6orf226Q5I0X4 101 aa5.11□□□□□ -1.59
VRK1-206ENST00000557222 MRPL54Q6P161 138 aaKnown RBP5.11□□□□□ -1.59
VRK1-206ENST00000557222 PRELID3AQ96N28 172 aa5.11□□□□□ -1.59
VRK1-206ENST00000557222 AMELXQ99217 191 aa5.11□□□□□ -1.59
VRK1-206ENST00000557222 BCE1O60756 84 aa5.1□□□□□ -1.59
VRK1-206ENST00000557222 PEA15Q15121 130 aa5.1□□□□□ -1.59
VRK1-206ENST00000557222 C2orf66Q6UXQ4 117 aa5.1□□□□□ -1.59
VRK1-206ENST00000557222 CTDSP1Q9GZU7 261 aa5.1□□□□□ -1.59
VRK1-206ENST00000557222 VCX2Q9H322 139 aa5.1□□□□□ -1.59
VRK1-206ENST00000557222 CYSLTR1Q9Y271 337 aa5.1□□□□□ -1.59
VRK1-206ENST00000557222 G0S2P27469 103 aa5.09□□□□□ -1.59
VRK1-206ENST00000557222 CXCL5P42830 114 aa5.09□□□□□ -1.59
VRK1-206ENST00000557222 HERVK_113P63121 156 aa5.09□□□□□ -1.59
VRK1-206ENST00000557222 ORMDL2Q53FV1 153 aa5.09□□□□□ -1.59
VRK1-206ENST00000557222 PAPPA-AS1Q5QFB9 102 aa5.09□□□□□ -1.59
VRK1-206ENST00000557222 MRPL55Q7Z7F7 128 aaKnown RBP5.09□□□□□ -1.59
VRK1-206ENST00000557222 Q8N8P6 123 aa5.09□□□□□ -1.59
VRK1-206ENST00000557222 TYMSOSQ8TAI1 123 aa5.09□□□□□ -1.59
VRK1-206ENST00000557222 ALKBH7Q9BT30 221 aaPredicted RBP5.09□□□□□ -1.59
VRK1-206ENST00000557222 MAP1LC3AQ9H492 121 aa5.09□□□□□ -1.59
VRK1-206ENST00000557222 A0A087X002 238 aa5.08□□□□□ -1.6
VRK1-206ENST00000557222 IGIPA6NJ69 53 aa5.08□□□□□ -1.6
VRK1-206ENST00000557222 C9JQL5 133 aa5.08□□□□□ -1.6
VRK1-206ENST00000557222 F8VRH5 84 aa5.08□□□□□ -1.6
VRK1-206ENST00000557222 TSPAN13O95857 204 aa5.08□□□□□ -1.6
VRK1-206ENST00000557222 LINC00173Q6ZV60 143 aa5.08□□□□□ -1.6
VRK1-206ENST00000557222 FAM229BQ4G0N7 80 aa5.07□□□□□ -1.6
VRK1-206ENST00000557222 LINC00469Q8N7U9 141 aa5.07□□□□□ -1.6
VRK1-206ENST00000557222 XAGE1AQ9HD64 81 aa5.07□□□□□ -1.6
VRK1-206ENST00000557222 TOMM7Q9P0U1 55 aa5.07□□□□□ -1.6
VRK1-206ENST00000557222 IGLV5-37A0A075B6J1 123 aa5.06□□□□□ -1.6
VRK1-206ENST00000557222 LOC389332A0A1B0GUA5 103 aa5.06□□□□□ -1.6
VRK1-206ENST00000557222 TIMM17AQ99595 171 aa5.06□□□□□ -1.6
VRK1-206ENST00000557222 TPRXLQ17RH7 258 aa5.05□□□□□ -1.6
VRK1-206ENST00000557222 KRTAP13-1Q8IUC0 172 aa5.05□□□□□ -1.6
VRK1-206ENST00000557222 LINC00167Q96N53 147 aa5.05□□□□□ -1.6
VRK1-206ENST00000557222 GEMIN7Q9H840 131 aaKnown RBP5.05□□□□□ -1.6
VRK1-206ENST00000557222 NXT2Q9NPJ8 142 aaKnown RBP5.05□□□□□ -1.6
VRK1-206ENST00000557222 CDKN2A-AS1Q9UH64 79 aa5.05□□□□□ -1.6
VRK1-206ENST00000557222 LINC01549A6NIU2 74 aa5.04□□□□□ -1.6
VRK1-206ENST00000557222 PDZD11Q5EBL8 140 aa5.04□□□□□ -1.6
VRK1-206ENST00000557222 ZC2HC1BQ5TFG8 222 aa5.04□□□□□ -1.6
VRK1-206ENST00000557222 PNRC1Q12796 327 aaPredicted RBP5.03□□□□□ -1.6
VRK1-206ENST00000557222 KRTAP13-2Q52LG2 175 aa5.03□□□□□ -1.6
VRK1-206ENST00000557222 LINC00304Q8N9R0 145 aa5.03□□□□□ -1.6
VRK1-206ENST00000557222 TOMM6Q96B49 74 aa5.03□□□□□ -1.6
VRK1-206ENST00000557222 IGLV5-45A0A087WSX0 123 aa5.02□□□□□ -1.61
VRK1-206ENST00000557222 TINCRA0A1B0GVN0 87 aa5.02□□□□□ -1.61
VRK1-206ENST00000557222 RPL37AP8A6NKH3 93 aa5.02□□□□□ -1.61
VRK1-206ENST00000557222 SMIM1B2RUZ4 78 aa5.02□□□□□ -1.61
VRK1-206ENST00000557222 MT-ND4LP03901 98 aa5.02□□□□□ -1.61
VRK1-206ENST00000557222 UBE2AP49459 152 aa5.02□□□□□ -1.61
VRK1-206ENST00000557222 ERASQ7Z444 233 aa5.02□□□□□ -1.61
VRK1-206ENST00000557222 NKAPP1Q8N9T2 125 aa5.02□□□□□ -1.61
VRK1-206ENST00000557222 COX7B2Q8TF08 81 aa5.02□□□□□ -1.61
VRK1-206ENST00000557222 IGLV7-46A0A075B6I9 117 aa5.01□□□□□ -1.61
VRK1-206ENST00000557222 IGKV2D-26A0A0A0MRZ7 120 aa5.01□□□□□ -1.61
VRK1-206ENST00000557222 SCGB3A1Q96QR1 104 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms