RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 XP32Q5T750 250 aa6.81□□□□□ -1.32
HNRNPC-230ENST00000557201 LRP2P98164 4655 aa6.8□□□□□ -1.32
HNRNPC-230ENST00000557201 LEPROTL1O95214 131 aa6.8□□□□□ -1.32
HNRNPC-230ENST00000557201 IFI27L1Q96BM0 104 aa6.8□□□□□ -1.32
HNRNPC-230ENST00000557201 HSPB8Q9UJY1 196 aa6.8□□□□□ -1.32
HNRNPC-230ENST00000557201 A0A087WZ39 114 aa6.79□□□□□ -1.32
HNRNPC-230ENST00000557201 TINCRA0A1B0GVN0 87 aa6.79□□□□□ -1.32
HNRNPC-230ENST00000557201 NDUFA6P56556 154 aa6.79□□□□□ -1.32
HNRNPC-230ENST00000557201 HERVK_113P63121 156 aa6.79□□□□□ -1.32
HNRNPC-230ENST00000557201 COX6A2Q02221 97 aa6.79□□□□□ -1.32
HNRNPC-230ENST00000557201 C15orf56Q8N910 161 aa6.79□□□□□ -1.32
HNRNPC-230ENST00000557201 PACRGQ96M98 296 aaPredicted RBP6.79□□□□□ -1.32
HNRNPC-230ENST00000557201 GVQW2A0A096LPI5 108 aaPredicted RBP6.78□□□□□ -1.32
HNRNPC-230ENST00000557201 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
HNRNPC-230ENST00000557201 IGHV1-58A0A0C4DH39 117 aa6.78□□□□□ -1.32
HNRNPC-230ENST00000557201 C5orf38Q86SI9 138 aa6.78□□□□□ -1.32
HNRNPC-230ENST00000557201 LINC00518Q8N0U6 118 aa6.78□□□□□ -1.32
HNRNPC-230ENST00000557201 LINC01561Q8N1V8 128 aa6.78□□□□□ -1.32
HNRNPC-230ENST00000557201 SPACA4Q8TDM5 124 aa6.78□□□□□ -1.32
HNRNPC-230ENST00000557201 IGLV5-45A0A087WSX0 123 aa6.77□□□□□ -1.33
HNRNPC-230ENST00000557201 A0A087WYN8 130 aa6.77□□□□□ -1.33
HNRNPC-230ENST00000557201 A0A0J9YXV3 536 aa6.77□□□□□ -1.33
HNRNPC-230ENST00000557201 hDV102S1A0JD36 115 aa6.77□□□□□ -1.33
HNRNPC-230ENST00000557201 APOMO95445 188 aa6.77□□□□□ -1.33
HNRNPC-230ENST00000557201 CHTF8P0CG12 524 aa6.77□□□□□ -1.33
HNRNPC-230ENST00000557201 MALP21145 153 aa6.77□□□□□ -1.33
HNRNPC-230ENST00000557201 GEMIN7Q9H840 131 aaKnown RBP6.77□□□□□ -1.33
HNRNPC-230ENST00000557201 PLAC8Q9NZF1 115 aa6.77□□□□□ -1.33
HNRNPC-230ENST00000557201 IGHV3-64A0A075B6Q5 118 aa6.76□□□□□ -1.33
HNRNPC-230ENST00000557201 IGLC3P0DOY3 106 aa6.76□□□□□ -1.33
HNRNPC-230ENST00000557201 FABP4P15090 132 aa6.76□□□□□ -1.33
HNRNPC-230ENST00000557201 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
HNRNPC-230ENST00000557201 CDKN2A-AS1Q9UH64 79 aa6.76□□□□□ -1.33
HNRNPC-230ENST00000557201 IGLV4-69A0A075B6H9 119 aa6.75□□□□□ -1.33
HNRNPC-230ENST00000557201 OR10D4PQ8NGN7 298 aa6.75□□□□□ -1.33
HNRNPC-230ENST00000557201 ODF1Q14990 250 aa6.74□□□□□ -1.33
HNRNPC-230ENST00000557201 MAP1LC3CQ9BXW4 147 aa6.74□□□□□ -1.33
HNRNPC-230ENST00000557201 CHTOPQ9Y3Y2 248 aaKnown RBP6.74□□□□□ -1.33
HNRNPC-230ENST00000557201 RNF213Q63HN8 5207 aa6.74□□□□□ -1.33
HNRNPC-230ENST00000557201 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.73□□□□□ -1.33
HNRNPC-230ENST00000557201 F8VRH5 84 aa6.73□□□□□ -1.33
HNRNPC-230ENST00000557201 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
HNRNPC-230ENST00000557201 HIGD2BQ4VC39 106 aa6.73□□□□□ -1.33
HNRNPC-230ENST00000557201 C2orf48Q96LS8 159 aa6.73□□□□□ -1.33
HNRNPC-230ENST00000557201 MRPL35Q9NZE8 188 aaKnown RBP6.73□□□□□ -1.33
HNRNPC-230ENST00000557201 C11orf86A6NJI1 115 aa6.72□□□□□ -1.33
HNRNPC-230ENST00000557201 F8WDY8 70 aa6.72□□□□□ -1.33
HNRNPC-230ENST00000557201 H3BRM9 83 aa6.72□□□□□ -1.33
HNRNPC-230ENST00000557201 KIAA0087Q14695 138 aa6.72□□□□□ -1.33
HNRNPC-230ENST00000557201 ORAOV1Q8WV07 137 aa6.72□□□□□ -1.33
HNRNPC-230ENST00000557201 LINC01600Q96MT4 127 aa6.72□□□□□ -1.33
HNRNPC-230ENST00000557201 SMIM1B2RUZ4 78 aa6.71□□□□□ -1.33
HNRNPC-230ENST00000557201 SYS1-DBNDD2H3BUS1 97 aa6.71□□□□□ -1.33
HNRNPC-230ENST00000557201 ZNF22P17026 224 aaPredicted RBP6.71□□□□□ -1.33
HNRNPC-230ENST00000557201 PLNP26678 52 aa6.71□□□□□ -1.33
HNRNPC-230ENST00000557201 SPAG11BQ08648 103 aa6.71□□□□□ -1.33
HNRNPC-230ENST00000557201 HIST3H2BBQ8N257 126 aa6.71□□□□□ -1.33
HNRNPC-230ENST00000557201 DPH3Q96FX2 82 aa6.71□□□□□ -1.33
HNRNPC-230ENST00000557201 IGLV5-39A0A0G2JS06 123 aa6.7□□□□□ -1.34
HNRNPC-230ENST00000557201 C5orf52A6NGY3 159 aa6.7□□□□□ -1.34
HNRNPC-230ENST00000557201 H0Y8G0 127 aa6.7□□□□□ -1.34
HNRNPC-230ENST00000557201 PRR3P79522 188 aaKnown RBP6.7□□□□□ -1.34
HNRNPC-230ENST00000557201 SYCNQ0VAF6 134 aa6.7□□□□□ -1.34
HNRNPC-230ENST00000557201 PET117Q6UWS5 81 aa6.7□□□□□ -1.34
HNRNPC-230ENST00000557201 Q8IZM0 81 aa6.7□□□□□ -1.34
HNRNPC-230ENST00000557201 LINC00526Q96FQ7 95 aa6.7□□□□□ -1.34
HNRNPC-230ENST00000557201 C3orf79P0CE67 100 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 S100A2P29034 98 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 SNRPEP62304 92 aaKnown RBP6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 TMEM170BQ5T4T1 132 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 C7orf33Q8WU49 177 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 HIST1H2BLQ99880 126 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 DPM2O94777 84 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 PRSS2P07478 247 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 SPINK8P0C7L1 97 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 C6orf226Q5I0X4 101 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 LINC01545Q5VT33 79 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 CARD19Q96LW7 228 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 CAMK2N2Q96S95 79 aa6.69□□□□□ -1.34
HNRNPC-230ENST00000557201 TMEM223A0PJW6 202 aa6.68□□□□□ -1.34
HNRNPC-230ENST00000557201 PCP4L1A6NKN8 68 aa6.68□□□□□ -1.34
HNRNPC-230ENST00000557201 NDUFA1O15239 70 aa6.68□□□□□ -1.34
HNRNPC-230ENST00000557201 IGKCP01834 107 aa6.68□□□□□ -1.34
HNRNPC-230ENST00000557201 KRTAP10-8P60410 259 aa6.68□□□□□ -1.34
HNRNPC-230ENST00000557201 RNF151Q2KHN1 245 aa6.68□□□□□ -1.34
HNRNPC-230ENST00000557201 MAJINQ3KP22 176 aa6.68□□□□□ -1.34
HNRNPC-230ENST00000557201 A0A096LNI7 61 aa6.67□□□□□ -1.34
HNRNPC-230ENST00000557201 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
HNRNPC-230ENST00000557201 CXCL5P42830 114 aa6.67□□□□□ -1.34
HNRNPC-230ENST00000557201 KRTDAPP60985 99 aa6.67□□□□□ -1.34
HNRNPC-230ENST00000557201 CKS1BP61024 79 aa6.67□□□□□ -1.34
HNRNPC-230ENST00000557201 UNQ6190/PRO20217Q6UXQ8 127 aa6.67□□□□□ -1.34
HNRNPC-230ENST00000557201 STPG4Q8N801 248 aa6.67□□□□□ -1.34
HNRNPC-230ENST00000557201 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
HNRNPC-230ENST00000557201 PMCHL2Q9BQD1 86 aa6.67□□□□□ -1.34
HNRNPC-230ENST00000557201 TOMM7Q9P0U1 55 aa6.67□□□□□ -1.34
HNRNPC-230ENST00000557201 TRBV30A0A0K0K1B3 111 aa6.66□□□□□ -1.34
HNRNPC-230ENST00000557201 SRSF9Q13242 221 aaKnown RBP eCLIP6.66□□□□□ -1.344e-16■■■□□ 16.3
HNRNPC-230ENST00000557201 C10orf25Q5T742 122 aa6.66□□□□□ -1.34
HNRNPC-230ENST00000557201 C2orf82Q6UX34 121 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms