RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 KRTAP10-9P60411 292 aa10.63□□□□□ -0.71
ARHGEF40-207ENST00000556399 CYSRT1A8MQ03 144 aa10.62□□□□□ -0.71
ARHGEF40-207ENST00000556399 PLA2G2AP14555 144 aa10.62□□□□□ -0.71
ARHGEF40-207ENST00000556399 IGLV1-51P01701 117 aa10.62□□□□□ -0.71
ARHGEF40-207ENST00000556399 A0A0U1RQV1 116 aa10.61□□□□□ -0.71
ARHGEF40-207ENST00000556399 MIFP14174 115 aa10.61□□□□□ -0.71
ARHGEF40-207ENST00000556399 LOC107984640A0A0U1RRK4 108 aa10.61□□□□□ -0.71
ARHGEF40-207ENST00000556399 MUC4Q99102 2169 aa10.61□□□□□ -0.71
ARHGEF40-207ENST00000556399 ZNF73O43830 326 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF40-207ENST00000556399 LELP1Q5T871 98 aa10.61□□□□□ -0.71
ARHGEF40-207ENST00000556399 MP68P56378 58 aa10.6□□□□□ -0.71
ARHGEF40-207ENST00000556399 FAM19A5Q7Z5A7 132 aaPredicted RBP10.6□□□□□ -0.71
ARHGEF40-207ENST00000556399 C3orf84H3BNL1 204 aa10.6□□□□□ -0.71
ARHGEF40-207ENST00000556399 KIR2DL5BQ8NHK3 375 aa10.59□□□□□ -0.71
ARHGEF40-207ENST00000556399 POLQO75417 2590 aa10.59□□□□□ -0.71
ARHGEF40-207ENST00000556399 IGHV3OR16-9A0A0B4J2B5 98 aa10.59□□□□□ -0.71
ARHGEF40-207ENST00000556399 PPDPFQ9H3Y8 114 aa10.59□□□□□ -0.71
ARHGEF40-207ENST00000556399 FAM19A1Q7Z5A9 133 aa10.58□□□□□ -0.72
ARHGEF40-207ENST00000556399 MPLKIPQ8TAP9 179 aa10.58□□□□□ -0.72
ARHGEF40-207ENST00000556399 MUC7Q8TAX7 377 aa10.58□□□□□ -0.72
ARHGEF40-207ENST00000556399 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.58□□□□□ -0.72
ARHGEF40-207ENST00000556399 NDUFC2-KCTD14E9PQ53 114 aa10.58□□□□□ -0.72
ARHGEF40-207ENST00000556399 TRAV7A0A075B6U4 112 aa10.57□□□□□ -0.72
ARHGEF40-207ENST00000556399 M0R378 163 aa10.57□□□□□ -0.72
ARHGEF40-207ENST00000556399 NDUFC1O43677 76 aa10.57□□□□□ -0.72
ARHGEF40-207ENST00000556399 LAMA1P25391 3075 aa10.57□□□□□ -0.72
ARHGEF40-207ENST00000556399 A0A1B0GUV1 79 aa10.57□□□□□ -0.72
ARHGEF40-207ENST00000556399 HILS1P60008 231 aa10.57□□□□□ -0.72
ARHGEF40-207ENST00000556399 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.56□□□□□ -0.72
ARHGEF40-207ENST00000556399 TRBV10-3A0A0K0K1G6 114 aa10.56□□□□□ -0.72
ARHGEF40-207ENST00000556399 C1orf195Q5TG92 126 aa10.56□□□□□ -0.72
ARHGEF40-207ENST00000556399 VCANP13611 3396 aa10.56□□□□□ -0.72
ARHGEF40-207ENST00000556399 IGKV2-28A0A075B6P5 120 aa10.55□□□□□ -0.72
ARHGEF40-207ENST00000556399 EIF4EBP3O60516 100 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF40-207ENST00000556399 IGKV2D-28P01615 120 aa10.55□□□□□ -0.72
ARHGEF40-207ENST00000556399 ZNF843Q8N446 348 aa10.55□□□□□ -0.72
ARHGEF40-207ENST00000556399 SPTSSBQ8NFR3 76 aa10.55□□□□□ -0.72
ARHGEF40-207ENST00000556399 HRCT1Q6UXD1 115 aa10.55□□□□□ -0.72
ARHGEF40-207ENST00000556399 NDUFS5O43920 106 aa10.55□□□□□ -0.72
ARHGEF40-207ENST00000556399 SYCNQ0VAF6 134 aa10.55□□□□□ -0.72
ARHGEF40-207ENST00000556399 C14orf177Q52M58 125 aa10.54□□□□□ -0.72
ARHGEF40-207ENST00000556399 NHLRC4P0CG21 123 aaPredicted RBP10.54□□□□□ -0.72
ARHGEF40-207ENST00000556399 A8MTW9 85 aa10.53□□□□□ -0.72
ARHGEF40-207ENST00000556399 C4orf48Q5BLP8 95 aa10.53□□□□□ -0.72
ARHGEF40-207ENST00000556399 VPS13AQ96RL7 3174 aa10.53□□□□□ -0.72
ARHGEF40-207ENST00000556399 SZT2Q5T011 3432 aa10.53□□□□□ -0.72
ARHGEF40-207ENST00000556399 C6orf223Q8N319 242 aa10.53□□□□□ -0.72
ARHGEF40-207ENST00000556399 PKD1L2Q7Z442 2459 aa10.53□□□□□ -0.72
ARHGEF40-207ENST00000556399 C11orf45Q8TAV5 145 aa10.53□□□□□ -0.72
ARHGEF40-207ENST00000556399 NDUFB1O75438 58 aa10.52□□□□□ -0.72
ARHGEF40-207ENST00000556399 CRYGAP11844 174 aa10.52□□□□□ -0.72
ARHGEF40-207ENST00000556399 ATP5EP56381 51 aaPredicted RBP10.52□□□□□ -0.72
ARHGEF40-207ENST00000556399 LINC00575Q6W349 94 aa10.52□□□□□ -0.72
ARHGEF40-207ENST00000556399 LRRK2Q5S007 2527 aa10.52□□□□□ -0.73
ARHGEF40-207ENST00000556399 FAM19A3Q7Z5A8 133 aa10.52□□□□□ -0.73
ARHGEF40-207ENST00000556399 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
ARHGEF40-207ENST00000556399 INAFM1C9JVW0 142 aa10.51□□□□□ -0.73
ARHGEF40-207ENST00000556399 KPRPQ5T749 579 aaPredicted RBP10.5□□□□□ -0.73
ARHGEF40-207ENST00000556399 Q8N3U1 123 aa10.5□□□□□ -0.73
ARHGEF40-207ENST00000556399 UBE2AP49459 152 aa10.5□□□□□ -0.73
ARHGEF40-207ENST00000556399 LINC01561Q8N1V8 128 aa10.5□□□□□ -0.73
ARHGEF40-207ENST00000556399 DEFB131BA0A096LNP1 70 aa10.49□□□□□ -0.73
ARHGEF40-207ENST00000556399 SERP1Q9Y6X1 66 aa10.49□□□□□ -0.73
ARHGEF40-207ENST00000556399 Q6ZVQ6 151 aa10.49□□□□□ -0.73
ARHGEF40-207ENST00000556399 ANKRD17O75179 2603 aaKnown RBP10.49□□□□□ -0.73
ARHGEF40-207ENST00000556399 MTORP42345 2549 aa10.49□□□□□ -0.73
ARHGEF40-207ENST00000556399 HIGD2AQ9BW72 106 aa10.48□□□□□ -0.73
ARHGEF40-207ENST00000556399 IGKV2-24A0A0C4DH68 120 aa10.47□□□□□ -0.73
ARHGEF40-207ENST00000556399 LINC01547P58512 204 aaPredicted RBP10.47□□□□□ -0.73
ARHGEF40-207ENST00000556399 SMIM26A0A096LP01 95 aa10.47□□□□□ -0.73
ARHGEF40-207ENST00000556399 WDFY4Q6ZS81 3184 aa10.46□□□□□ -0.73
ARHGEF40-207ENST00000556399 EGFEM1PQ0D2K5 195 aa10.46□□□□□ -0.74
ARHGEF40-207ENST00000556399 DHRS4-AS1Q9P1J3 65 aa10.46□□□□□ -0.74
ARHGEF40-207ENST00000556399 CHKB-CPT1BH3BT56 60 aa10.45□□□□□ -0.74
ARHGEF40-207ENST00000556399 RPL37AP8A6NKH3 93 aa10.45□□□□□ -0.74
ARHGEF40-207ENST00000556399 C16orf95Q9H693 158 aa10.45□□□□□ -0.74
ARHGEF40-207ENST00000556399 CELSR3Q9NYQ7 3312 aa10.44□□□□□ -0.74
ARHGEF40-207ENST00000556399 JMJD1CQ15652 2540 aa10.44□□□□□ -0.74
ARHGEF40-207ENST00000556399 ZNF462Q96JM2 2506 aa10.43□□□□□ -0.74
ARHGEF40-207ENST00000556399 CELA1Q9UNI1 258 aa10.43□□□□□ -0.74
ARHGEF40-207ENST00000556399 FAM30AQ9NZY2 134 aa10.42□□□□□ -0.74
ARHGEF40-207ENST00000556399 MGAQ8IWI9 3026 aa10.42□□□□□ -0.74
ARHGEF40-207ENST00000556399 H0Y9J4 135 aa10.42□□□□□ -0.74
ARHGEF40-207ENST00000556399 IGHV4-30-4P0DP06 118 aa10.41□□□□□ -0.74
ARHGEF40-207ENST00000556399 LY6G6DO95868 133 aa10.41□□□□□ -0.74
ARHGEF40-207ENST00000556399 WFDC10BQ8IUB3 73 aa10.4□□□□□ -0.74
ARHGEF40-207ENST00000556399 ZFYVE26Q68DK2 2539 aa10.4□□□□□ -0.75
ARHGEF40-207ENST00000556399 RPS28P62857 69 aaKnown RBP10.39□□□□□ -0.75
ARHGEF40-207ENST00000556399 SMR3AQ99954 134 aa10.39□□□□□ -0.75
ARHGEF40-207ENST00000556399 A0A096LNI7 61 aa10.38□□□□□ -0.75
ARHGEF40-207ENST00000556399 PRR4Q16378 134 aa10.38□□□□□ -0.75
ARHGEF40-207ENST00000556399 CXCL6P80162 114 aa10.38□□□□□ -0.75
ARHGEF40-207ENST00000556399 B9D2Q9BPU9 175 aa10.38□□□□□ -0.75
ARHGEF40-207ENST00000556399 DSPP15924 2871 aaKnown RBP10.38□□□□□ -0.75
ARHGEF40-207ENST00000556399 NBEAQ8NFP9 2946 aa10.38□□□□□ -0.75
ARHGEF40-207ENST00000556399 WFDC13Q8IUB5 93 aa10.38□□□□□ -0.75
ARHGEF40-207ENST00000556399 PRYO14603 147 aa10.36□□□□□ -0.75
ARHGEF40-207ENST00000556399 SPATA3Q8NHX4 192 aa10.36□□□□□ -0.75
ARHGEF40-207ENST00000556399 TMEM254Q8TBM7 123 aa10.36□□□□□ -0.75
ARHGEF40-207ENST00000556399 FSHBP01225 129 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms