RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 Q6ZRU5 148 aa9.13□□□□□ -0.95
SNX6-206ENST00000556162 SDIM1Q6ZPB5 146 aa9.13□□□□□ -0.95
SNX6-206ENST00000556162 KIAA1109Q2LD37 5005 aa9.12□□□□□ -0.95
SNX6-206ENST00000556162 SYS1-DBNDD2H3BUS1 97 aa9.12□□□□□ -0.95
SNX6-206ENST00000556162 S100A2P29034 98 aa9.12□□□□□ -0.95
SNX6-206ENST00000556162 CKS1BP61024 79 aa9.12□□□□□ -0.95
SNX6-206ENST00000556162 PLNP26678 52 aa9.11□□□□□ -0.95
SNX6-206ENST00000556162 UNQ6190/PRO20217Q6UXQ8 127 aa9.11□□□□□ -0.95
SNX6-206ENST00000556162 COX7B2Q8TF08 81 aa9.11□□□□□ -0.95
SNX6-206ENST00000556162 RYR1P21817 5038 aa9.11□□□□□ -0.95
SNX6-206ENST00000556162 DPM2O94777 84 aa9.11□□□□□ -0.95
SNX6-206ENST00000556162 PET117Q6UWS5 81 aa9.11□□□□□ -0.95
SNX6-206ENST00000556162 C2orf82Q6UX34 121 aa9.11□□□□□ -0.95
SNX6-206ENST00000556162 HIST3H2BBQ8N257 126 aa9.11□□□□□ -0.95
SNX6-206ENST00000556162 PMCHL2Q9BQD1 86 aa9.11□□□□□ -0.95
SNX6-206ENST00000556162 PKIGQ9Y2B9 76 aa9.11□□□□□ -0.95
SNX6-206ENST00000556162 IGLV5-39A0A0G2JS06 123 aa9.1□□□□□ -0.95
SNX6-206ENST00000556162 KRTDAPP60985 99 aa9.1□□□□□ -0.95
SNX6-206ENST00000556162 RNF151Q2KHN1 245 aa9.1□□□□□ -0.95
SNX6-206ENST00000556162 C10orf25Q5T742 122 aa9.1□□□□□ -0.95
SNX6-206ENST00000556162 FAM30AQ9NZY2 134 aa9.1□□□□□ -0.95
SNX6-206ENST00000556162 IGKCP01834 107 aa9.09□□□□□ -0.95
SNX6-206ENST00000556162 C3orf79P0CE67 100 aa9.09□□□□□ -0.95
SNX6-206ENST00000556162 CXCL5P42830 114 aa9.09□□□□□ -0.95
SNX6-206ENST00000556162 TMEM223A0PJW6 202 aa9.08□□□□□ -0.96
SNX6-206ENST00000556162 CDK2AP2O75956 126 aa9.08□□□□□ -0.96
SNX6-206ENST00000556162 TRBV30A0A0K0K1B3 111 aa9.08□□□□□ -0.96
SNX6-206ENST00000556162 Q6ZSA8 131 aa9.08□□□□□ -0.96
SNX6-206ENST00000556162 C6orf48Q9UBA6 75 aa9.08□□□□□ -0.96
SNX6-206ENST00000556162 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
SNX6-206ENST00000556162 LINC01545Q5VT33 79 aa9.07□□□□□ -0.96
SNX6-206ENST00000556162 DPH3Q96FX2 82 aa9.07□□□□□ -0.96
SNX6-206ENST00000556162 HIST1H2BLQ99880 126 aa9.07□□□□□ -0.96
SNX6-206ENST00000556162 CTAG1AP78358 180 aa9.06□□□□□ -0.96
SNX6-206ENST00000556162 HSPG2P98160 4391 aa9.06□□□□□ -0.96
SNX6-206ENST00000556162 IGKV2-24A0A0C4DH68 120 aa9.05□□□□□ -0.96
SNX6-206ENST00000556162 C20orf202A1L168 122 aa9.05□□□□□ -0.96
SNX6-206ENST00000556162 XGP55808 180 aa9.05□□□□□ -0.96
SNX6-206ENST00000556162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.05□□□□□ -0.96
SNX6-206ENST00000556162 HERVK_113P61574 105 aa9.04□□□□□ -0.96
SNX6-206ENST00000556162 GAGE2BQ13066 116 aa9.04□□□□□ -0.96
SNX6-206ENST00000556162 LINC00474Q9P2X8 69 aa9.04□□□□□ -0.96
SNX6-206ENST00000556162 A0A096LNI7 61 aa9.04□□□□□ -0.96
SNX6-206ENST00000556162 CHTF8P0CG12 524 aa9.04□□□□□ -0.96
SNX6-206ENST00000556162 RPL18AQ02543 176 aaKnown RBP9.04□□□□□ -0.96
SNX6-206ENST00000556162 C9orf116Q5BN46 136 aaPredicted RBP9.04□□□□□ -0.96
SNX6-206ENST00000556162 PANO1I0J062 215 aa9.03□□□□□ -0.96
SNX6-206ENST00000556162 TLX1NBP0CAT3 122 aa9.03□□□□□ -0.96
SNX6-206ENST00000556162 HAMPP81172 84 aa9.03□□□□□ -0.96
SNX6-206ENST00000556162 SFTA2Q6UW10 78 aa9.03□□□□□ -0.96
SNX6-206ENST00000556162 PTTG1IPP53801 180 aa9.02□□□□□ -0.96
SNX6-206ENST00000556162 CIRBPQ14011 172 aaKnown RBP9.02□□□□□ -0.96
SNX6-206ENST00000556162 MAJINQ3KP22 176 aa9.02□□□□□ -0.96
SNX6-206ENST00000556162 SPACA4Q8TDM5 124 aa9.02□□□□□ -0.96
SNX6-206ENST00000556162 NDUFC2-KCTD14E9PQ53 114 aa9.02□□□□□ -0.97
SNX6-206ENST00000556162 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
SNX6-206ENST00000556162 CIRBP-AS1Q8TBR5 109 aa9.02□□□□□ -0.97
SNX6-206ENST00000556162 LEPROTO15243 131 aa9.01□□□□□ -0.97
SNX6-206ENST00000556162 PYY3Q5JQD4 70 aa9.01□□□□□ -0.97
SNX6-206ENST00000556162 Q6ZRP5 223 aa9.01□□□□□ -0.97
SNX6-206ENST00000556162 PLEKHB2Q96CS7 222 aa9.01□□□□□ -0.97
SNX6-206ENST00000556162 HERC2O95714 4834 aa9.01□□□□□ -0.97
SNX6-206ENST00000556162 GAGE2EQ4V326 116 aa9□□□□□ -0.97
SNX6-206ENST00000556162 GAGE2DQ9UEU5 116 aa9□□□□□ -0.97
SNX6-206ENST00000556162 LINC00587B1AMM8 73 aa9□□□□□ -0.97
SNX6-206ENST00000556162 ZNF625Q96I27 306 aaPredicted RBP9□□□□□ -0.97
SNX6-206ENST00000556162 A0A087WYN8 130 aa8.99□□□□□ -0.97
SNX6-206ENST00000556162 STPG4Q8N801 248 aa8.99□□□□□ -0.97
SNX6-206ENST00000556162 FAT1Q14517 4588 aa8.99□□□□□ -0.97
SNX6-206ENST00000556162 J3QQQ9 107 aa8.98□□□□□ -0.97
SNX6-206ENST00000556162 NDUFA12Q9UI09 145 aa8.98□□□□□ -0.97
SNX6-206ENST00000556162 E9PLD3 99 aa8.98□□□□□ -0.97
SNX6-206ENST00000556162 LGALS3P17931 250 aaKnown RBP8.98□□□□□ -0.97
SNX6-206ENST00000556162 MYMXA0A1B0GTQ4 84 aa8.97□□□□□ -0.97
SNX6-206ENST00000556162 PFN2P35080 140 aa8.97□□□□□ -0.97
SNX6-206ENST00000556162 PLAC8Q9NZF1 115 aa8.97□□□□□ -0.97
SNX6-206ENST00000556162 ERG28Q9UKR5 140 aa8.97□□□□□ -0.97
SNX6-206ENST00000556162 SMR3BP02814 79 aaPredicted RBP8.96□□□□□ -0.97
SNX6-206ENST00000556162 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.97
SNX6-206ENST00000556162 HERV-K104P63124 156 aa8.96□□□□□ -0.97
SNX6-206ENST00000556162 COX17Q14061 63 aa8.96□□□□□ -0.97
SNX6-206ENST00000556162 ATOH7Q8N100 152 aa8.96□□□□□ -0.97
SNX6-206ENST00000556162 NMUP48645 174 aa8.96□□□□□ -0.98
SNX6-206ENST00000556162 SCGB1D1O95968 90 aa8.94□□□□□ -0.98
SNX6-206ENST00000556162 JOSD1Q15040 202 aaPredicted RBP8.94□□□□□ -0.98
SNX6-206ENST00000556162 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
SNX6-206ENST00000556162 A0A1W2PNN7 141 aa8.94□□□□□ -0.98
SNX6-206ENST00000556162 TSTD3H0UI37 97 aa8.94□□□□□ -0.98
SNX6-206ENST00000556162 MEIG1Q5JSS6 88 aa8.94□□□□□ -0.98
SNX6-206ENST00000556162 C9orf129Q5T035 196 aaKnown RBP8.94□□□□□ -0.98
SNX6-206ENST00000556162 LINC00158P58513 81 aa8.93□□□□□ -0.98
SNX6-206ENST00000556162 Q8N1X5 172 aa8.92□□□□□ -0.98
SNX6-206ENST00000556162 A0A0U1RRA0 63 aa8.91□□□□□ -0.98
SNX6-206ENST00000556162 FAM229AH3BQW9 127 aa8.91□□□□□ -0.98
SNX6-206ENST00000556162 IGKV2D-26A0A0A0MRZ7 120 aa8.91□□□□□ -0.98
SNX6-206ENST00000556162 FAM168BA1KXE4 195 aa8.91□□□□□ -0.98
SNX6-206ENST00000556162 HSBP1L1C9JCN9 74 aa8.91□□□□□ -0.98
SNX6-206ENST00000556162 SMIM13P0DJ93 91 aa8.91□□□□□ -0.98
SNX6-206ENST00000556162 ANKRD39Q53RE8 183 aa8.91□□□□□ -0.98
SNX6-206ENST00000556162 LINC00528Q8N1L1 170 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms