RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 DEFB4AO15263 64 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 TRIAP1O43715 76 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 INSP01308 110 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 PRM2P04554 102 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 CRYGDP07320 174 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 TSPEAR-AS2P59090 65 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 Q1RN00 199 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 SERTAD4-AS1Q5TG53 156 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 Q5XG85 94 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 Q6ZTC4 211 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 LINC00643Q86TS7 51 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 C14orf178Q8N769 122 aaPredicted RBP2.75□□□□□ -1.97
LINC00648-202ENST00000555985 Q8TAT8 98 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 LINC00477Q96M19 166 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 LENEPQ9Y5L5 61 aa2.75□□□□□ -1.97
LINC00648-202ENST00000555985 IGLV4-69A0A075B6H9 119 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.74□□□□□ -1.97
LINC00648-202ENST00000555985 OXTP01178 125 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 TRACP01848 142 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 TMEM258P61165 79 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 HRCT1Q6UXD1 115 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 C2orf66Q6UXQ4 117 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 C5orf38Q86SI9 138 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 TRAV12-2A0A075B6T6 113 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 hADV29S1A0JD25 119 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 TMEM223A0PJW6 202 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 LYRM9A8MSI8 78 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 IGKV3-20P01619 116 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 CXCL5P42830 114 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 DAZ2Q13117 558 aaKnown RBP2.74□□□□□ -1.97
LINC00648-202ENST00000555985 MUSTN1Q8IVN3 82 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 SMCR5Q8TEV8 140 aa2.74□□□□□ -1.97
LINC00648-202ENST00000555985 IGHV4-4A0A075B6R2 117 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 TRAV10A0A0B4J240 114 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 IGKV3D-20A0A0C4DH25 116 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 J3QQQ9 107 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 SUMO2P61956 95 aaKnown RBP2.73□□□□□ -1.97
LINC00648-202ENST00000555985 HIST1H4AP62805 103 aaKnown RBP2.73□□□□□ -1.97
LINC00648-202ENST00000555985 FAM222AQ5U5X8 452 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 SDIM1Q6ZPB5 146 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 C16orf74Q96GX8 76 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 CYSTM1Q9H1C7 97 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 ATOX1O00244 68 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 SPART-AS1P0CW21 52 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 LGALS3P17931 250 aaKnown RBP2.73□□□□□ -1.97
LINC00648-202ENST00000555985 ICOSQ9Y6W8 199 aa2.73□□□□□ -1.97
LINC00648-202ENST00000555985 LST1O00453 97 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 TSHBP01222 138 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 COX6CP09669 75 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 VPREB1P12018 145 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 C11orf21Q9P2W6 132 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 DNAH5Q8TE73 4624 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 NACAE9PAV3 2078 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 IGIPA6NJ69 53 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 H3BNG1 76 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 SPANXN1Q5VSR9 72 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 DSCR8Q96T75 97 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 JPT2Q9H910 190 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 PRO0628Q9UI54 55 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 PYGO1Q9Y3Y4 419 aa2.72□□□□□ -1.97
LINC00648-202ENST00000555985 DEFB131BA0A096LNP1 70 aa2.71□□□□□ -1.97
LINC00648-202ENST00000555985 LEPROTO15243 131 aa2.71□□□□□ -1.97
LINC00648-202ENST00000555985 CLEC2BQ92478 149 aa2.71□□□□□ -1.97
LINC00648-202ENST00000555985 UPK3BQ9BT76 320 aa2.71□□□□□ -1.97
LINC00648-202ENST00000555985 KRTAP4-5Q9BYR2 181 aa2.71□□□□□ -1.97
LINC00648-202ENST00000555985 TRAV13-1A0A0B4J241 112 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 TRAV12-3A0A0B4J271 114 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 SDHAF1A6NFY7 115 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 M0R381 172 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 ZNF876PQ49A33 203 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 Q6ZR54 194 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 RPL39LQ96EH5 51 aaKnown RBP2.71□□□□□ -1.98
LINC00648-202ENST00000555985 TMEM141Q96I45 108 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 IGHV1OR15-1A0A075B7D0 117 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 TRAV8-3A0A0A6YYJ7 113 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 RS1O15537 224 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 RPL18AQ02543 176 aaKnown RBP2.71□□□□□ -1.98
LINC00648-202ENST00000555985 RHOHQ15669 191 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 SERP2Q8N6R1 65 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 TIMM21Q9BVV7 248 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 DPH3P1Q9H4G8 78 aa2.71□□□□□ -1.98
LINC00648-202ENST00000555985 DNAH8Q96JB1 4490 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 IGHV3OR16-12A0A075B7B8 117 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 IGHV3-16A0A0C4DH30 117 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 A0A0J9YXY3 114 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 TINCRA0A1B0GVN0 87 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 A0A1B0GVY2 172 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 I3L3M4 83 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 RNASE4P34096 147 aaKnown RBP2.7□□□□□ -1.98
LINC00648-202ENST00000555985 C6orf226Q5I0X4 101 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 VSIG2Q96IQ7 327 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 C9orf85Q96MD7 179 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 TIMM17AQ99595 171 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 HERC2O95714 4834 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 PPP1R17O96001 155 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 Q6ZTI0 123 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 LINC00336Q6ZUF6 198 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 LITAFQ99732 161 aa2.7□□□□□ -1.98
LINC00648-202ENST00000555985 NOP10Q9NPE3 64 aaKnown RBP2.7□□□□□ -1.98
LINC00648-202ENST00000555985 RNASE3P12724 160 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms