RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 Q6ZRU5 148 aa8.14□□□□□ -1.11
ABCD4-223ENST00000555904 FUSP35637 526 aaKnown RBP eCLIP8.13□□□□□ -1.11
ABCD4-223ENST00000555904 NMUP48645 174 aa8.13□□□□□ -1.11
ABCD4-223ENST00000555904 UNQ6190/PRO20217Q6UXQ8 127 aa8.13□□□□□ -1.11
ABCD4-223ENST00000555904 C9orf163Q8N9P6 203 aa8.13□□□□□ -1.11
ABCD4-223ENST00000555904 MYMXA0A1B0GTQ4 84 aa8.12□□□□□ -1.11
ABCD4-223ENST00000555904 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
ABCD4-223ENST00000555904 SLPIP03973 132 aa8.12□□□□□ -1.11
ABCD4-223ENST00000555904 GCSHP23434 173 aa8.12□□□□□ -1.11
ABCD4-223ENST00000555904 RNF151Q2KHN1 245 aa8.12□□□□□ -1.11
ABCD4-223ENST00000555904 NDUFA12Q9UI09 145 aa8.12□□□□□ -1.11
ABCD4-223ENST00000555904 HERV-K104P63124 156 aa8.11□□□□□ -1.11
ABCD4-223ENST00000555904 C10orf25Q5T742 122 aa8.11□□□□□ -1.11
ABCD4-223ENST00000555904 VAMP8Q9BV40 100 aa8.11□□□□□ -1.11
ABCD4-223ENST00000555904 C6orf48Q9UBA6 75 aa8.11□□□□□ -1.11
ABCD4-223ENST00000555904 LOC107984640A0A0U1RRK4 108 aa8.1□□□□□ -1.11
ABCD4-223ENST00000555904 TSPEAR-AS2P59090 65 aa8.1□□□□□ -1.11
ABCD4-223ENST00000555904 RPL18AQ02543 176 aaKnown RBP8.1□□□□□ -1.11
ABCD4-223ENST00000555904 ZNF625Q96I27 306 aaPredicted RBP8.1□□□□□ -1.11
ABCD4-223ENST00000555904 LINC00587B1AMM8 73 aa8.09□□□□□ -1.11
ABCD4-223ENST00000555904 MAJINQ3KP22 176 aa8.09□□□□□ -1.11
ABCD4-223ENST00000555904 LINC01620Q4KN68 170 aa8.09□□□□□ -1.11
ABCD4-223ENST00000555904 ANKRD39Q53RE8 183 aa8.09□□□□□ -1.11
ABCD4-223ENST00000555904 PYY3Q5JQD4 70 aa8.09□□□□□ -1.11
ABCD4-223ENST00000555904 RYR3Q15413 4870 aa8.09□□□□□ -1.11
ABCD4-223ENST00000555904 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
ABCD4-223ENST00000555904 ZNF815PA8K554 130 aa8.08□□□□□ -1.12
ABCD4-223ENST00000555904 NDUFC2-KCTD14E9PQ53 114 aa8.08□□□□□ -1.12
ABCD4-223ENST00000555904 COX17Q14061 63 aa8.08□□□□□ -1.12
ABCD4-223ENST00000555904 MEIG1Q5JSS6 88 aa8.08□□□□□ -1.12
ABCD4-223ENST00000555904 LINC00474Q9P2X8 69 aa8.08□□□□□ -1.12
ABCD4-223ENST00000555904 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
ABCD4-223ENST00000555904 DNAH2Q9P225 4427 aa8.08□□□□□ -1.12
ABCD4-223ENST00000555904 PFN2P35080 140 aa8.07□□□□□ -1.12
ABCD4-223ENST00000555904 S100A12P80511 92 aa8.07□□□□□ -1.12
ABCD4-223ENST00000555904 CIRBPQ14011 172 aaKnown RBP8.07□□□□□ -1.12
ABCD4-223ENST00000555904 C9orf116Q5BN46 136 aaPredicted RBP8.07□□□□□ -1.12
ABCD4-223ENST00000555904 PAM16Q9Y3D7 125 aa8.07□□□□□ -1.12
ABCD4-223ENST00000555904 FRAS1Q86XX4 4008 aa8.06□□□□□ -1.12
ABCD4-223ENST00000555904 TLX1NBP0CAT3 122 aa8.06□□□□□ -1.12
ABCD4-223ENST00000555904 GAGE2BQ13066 116 aa8.06□□□□□ -1.12
ABCD4-223ENST00000555904 SPATA45Q537H7 98 aa8.06□□□□□ -1.12
ABCD4-223ENST00000555904 SCGB1D4Q6XE38 83 aa8.06□□□□□ -1.12
ABCD4-223ENST00000555904 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
ABCD4-223ENST00000555904 DNAH10Q8IVF4 4471 aa8.06□□□□□ -1.12
ABCD4-223ENST00000555904 IGKV2-24A0A0C4DH68 120 aa8.05□□□□□ -1.12
ABCD4-223ENST00000555904 SMIM6P0DI80 62 aa8.05□□□□□ -1.12
ABCD4-223ENST00000555904 LINC00158P58513 81 aa8.05□□□□□ -1.12
ABCD4-223ENST00000555904 DPH3Q96FX2 82 aa8.05□□□□□ -1.12
ABCD4-223ENST00000555904 LOC105371267A0A1B0GV96 52 aa8.04□□□□□ -1.12
ABCD4-223ENST00000555904 PTTG1IPP53801 180 aa8.04□□□□□ -1.12
ABCD4-223ENST00000555904 GAGE2EQ4V326 116 aa8.04□□□□□ -1.12
ABCD4-223ENST00000555904 GAGE2DQ9UEU5 116 aa8.04□□□□□ -1.12
ABCD4-223ENST00000555904 A0A096LNI7 61 aa8.03□□□□□ -1.12
ABCD4-223ENST00000555904 A0A0J9YXY3 114 aa8.03□□□□□ -1.12
ABCD4-223ENST00000555904 A0A0U1RRA0 63 aa8.03□□□□□ -1.12
ABCD4-223ENST00000555904 KRTAP10-1P60331 282 aa8.03□□□□□ -1.12
ABCD4-223ENST00000555904 Q6ZRP5 223 aa8.03□□□□□ -1.12
ABCD4-223ENST00000555904 PCP2Q8IVA1 136 aa8.03□□□□□ -1.12
ABCD4-223ENST00000555904 TTTY13Q9BZ97 58 aa8.03□□□□□ -1.12
ABCD4-223ENST00000555904 SMIM13P0DJ93 91 aa8.02□□□□□ -1.13
ABCD4-223ENST00000555904 TMEM238C9JI98 176 aa8.01□□□□□ -1.13
ABCD4-223ENST00000555904 CHTF8P0CG12 524 aa8.01□□□□□ -1.13
ABCD4-223ENST00000555904 COX8AP10176 69 aa8.01□□□□□ -1.13
ABCD4-223ENST00000555904 MIEN1Q9BRT3 115 aa8.01□□□□□ -1.13
ABCD4-223ENST00000555904 DNAH17Q9UFH2 4485 aa8□□□□□ -1.13
ABCD4-223ENST00000555904 TIMM17BO60830 172 aa8□□□□□ -1.13
ABCD4-223ENST00000555904 MIR7-3HGQ8N6C7 128 aa8□□□□□ -1.13
ABCD4-223ENST00000555904 SPACA4Q8TDM5 124 aa8□□□□□ -1.13
ABCD4-223ENST00000555904 XAGE1AQ9HD64 81 aa8□□□□□ -1.13
ABCD4-223ENST00000555904 SLC25A34Q6PIV7 304 aa7.99□□□□□ -1.13
ABCD4-223ENST00000555904 Q6ZSA8 131 aa7.99□□□□□ -1.13
ABCD4-223ENST00000555904 C14orf144Q96I85 54 aa7.99□□□□□ -1.13
ABCD4-223ENST00000555904 SND1-IT1Q9HBX3 110 aa7.99□□□□□ -1.13
ABCD4-223ENST00000555904 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.99□□□□□ -1.13
ABCD4-223ENST00000555904 FAT2Q9NYQ8 4349 aa7.99□□□□□ -1.13
ABCD4-223ENST00000555904 DLEU1O43261 78 aa7.98□□□□□ -1.13
ABCD4-223ENST00000555904 BOD1L2Q8IYS8 172 aa7.98□□□□□ -1.13
ABCD4-223ENST00000555904 COPS9Q8WXC6 57 aa7.98□□□□□ -1.13
ABCD4-223ENST00000555904 HECTD4Q9Y4D8 3996 aa7.98□□□□□ -1.13
ABCD4-223ENST00000555904 DAND5Q8N907 189 aa7.97□□□□□ -1.13
ABCD4-223ENST00000555904 PANO1I0J062 215 aa7.96□□□□□ -1.14
ABCD4-223ENST00000555904 C9orf129Q5T035 196 aaKnown RBP7.96□□□□□ -1.14
ABCD4-223ENST00000555904 Q6ZVH6 145 aa7.96□□□□□ -1.14
ABCD4-223ENST00000555904 FAM30AQ9NZY2 134 aa7.96□□□□□ -1.14
ABCD4-223ENST00000555904 PKD1P98161 4303 aa7.95□□□□□ -1.14
ABCD4-223ENST00000555904 A0A087WYN8 130 aa7.95□□□□□ -1.14
ABCD4-223ENST00000555904 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
ABCD4-223ENST00000555904 SRSF9Q13242 221 aaKnown RBP eCLIP7.95□□□□□ -1.14
ABCD4-223ENST00000555904 ADAMTSL4-AS1Q5T5F5 129 aa7.95□□□□□ -1.14
ABCD4-223ENST00000555904 SCXQ7RTU7 201 aa7.95□□□□□ -1.14
ABCD4-223ENST00000555904 FAM19A5Q7Z5A7 132 aaPredicted RBP7.95□□□□□ -1.14
ABCD4-223ENST00000555904 CDK2AP2O75956 126 aa7.94□□□□□ -1.14
ABCD4-223ENST00000555904 NPC2P61916 151 aa7.94□□□□□ -1.14
ABCD4-223ENST00000555904 NKAPP1Q8N9T2 125 aa7.94□□□□□ -1.14
ABCD4-223ENST00000555904 CIRBP-AS1Q8TBR5 109 aa7.94□□□□□ -1.14
ABCD4-223ENST00000555904 C12orf57Q99622 126 aa7.94□□□□□ -1.14
ABCD4-223ENST00000555904 LITAFQ99732 161 aa7.94□□□□□ -1.14
ABCD4-223ENST00000555904 SPANXDQ9BXN6 97 aa7.94□□□□□ -1.14
ABCD4-223ENST00000555904 SPANXCQ9NY87 97 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms